EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026864 (Gene tree)
Gene ID: 14828
Gene Symbol: Hspa5
Alias: 78kDa|Bip|D2Wsu141e|D2Wsu17e|Grp78|Hsce70|Sez7|XAP-1 antigen|baffled|mBiP
Full Name: heat shock protein 5
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 5578
Position: chr2: 34771970-34777547
Accession: 95835
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000129333	-	452	-	-	- (aa)	-	-
ENSMUST00000155595	-	574	-	-	- (aa)	-	-
ENSMUST00000028222	-	3672	-	ENSMUSP00000028222	655 (aa)	-	P20029
ENSMUST00000100171	-	2613	-	ENSMUSP00000097747	655 (aa)	-	P20029
ENSMUST00000145466	-	720	-	-	- (aa)	-	-
ENSMUST00000137145	-	477	-	ENSMUSP00000141966	42 (aa)	-	A0A0A6YXF5

Gene Model

Click here to download ENSMUSG00000026864's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03060	Protein export	KEGG
mmu04141	Protein processing in endoplasmic reticulum	KEGG
mmu04612	Antigen processing and presentation	KEGG
mmu04918	Thyroid hormone synthesis	KEGG
mmu05020	Prion diseases	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026864's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026864	Hspa5	99	98.624	ENSG00000044574	HSPA5	100	98.624	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005515	protein binding	11836248.12065409.14960307.16595634.16645094.17991893.18923430.19171884.21217698.21494687.22589549.22837305.23055941.	IPI	Function
GO:0005524	ATP binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005783	endoplasmic reticulum	7679955.12646573.12826667.14960307.15294975.15452145.16906134.21494687.22783020.23913443.23926254.26438849.26582200.	IDA	Component
GO:0005783	endoplasmic reticulum	16223484.19474315.	ISO	Component
GO:0005788	endoplasmic reticulum lumen	21873635.	IBA	Component
GO:0005788	endoplasmic reticulum lumen	19816510.	IDA	Component
GO:0005789	endoplasmic reticulum membrane	22589549.	IDA	Component
GO:0005790	smooth endoplasmic reticulum	-	ISO	Component
GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	21187406.	IDA	Component
GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	22837305.	IDA	Component
GO:0006983	ER overload response	11854325.	IDA	Process
GO:0006986	response to unfolded protein	21873635.	IBA	Process
GO:0008180	COP9 signalosome	-	ISO	Component
GO:0009986	cell surface	17991893.	IDA	Component
GO:0010976	positive regulation of neuron projection development	-	ISO	Process
GO:0016020	membrane	21873635.	IBA	Component
GO:0016020	membrane	23444373.	ISO	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0016887	ATPase activity	21873635.	IBA	Function
GO:0016887	ATPase activity	-	ISO	Function
GO:0019899	enzyme binding	-	ISO	Function
GO:0019904	protein domain specific binding	-	ISO	Function
GO:0021589	cerebellum structural organization	19816510.	IMP	Process
GO:0021680	cerebellar Purkinje cell layer development	19816510.	IMP	Process
GO:0030176	integral component of endoplasmic reticulum membrane	-	ISO	Component
GO:0030335	positive regulation of cell migration	-	ISO	Process
GO:0030433	ubiquitin-dependent ERAD pathway	21873635.	IBA	Process
GO:0030496	midbody	-	ISO	Component
GO:0030512	negative regulation of transforming growth factor beta receptor signaling pathway	17991893.	IGI	Process
GO:0030968	endoplasmic reticulum unfolded protein response	21873635.	IBA	Process
GO:0030968	endoplasmic reticulum unfolded protein response	19816510.	IMP	Process
GO:0031072	heat shock protein binding	21873635.	IBA	Function
GO:0031204	posttranslational protein targeting to membrane, translocation	-	ISO	Process
GO:0031398	positive regulation of protein ubiquitination	19816510.	IMP	Process
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0032991	protein-containing complex	-	ISO	Component
GO:0034605	cellular response to heat	21873635.	IBA	Process
GO:0034620	cellular response to unfolded protein	21873635.	IBA	Process
GO:0034663	endoplasmic reticulum chaperone complex	21873635.	IBA	Component
GO:0034663	endoplasmic reticulum chaperone complex	12475965.	IDA	Component
GO:0034663	endoplasmic reticulum chaperone complex	-	ISO	Component
GO:0034976	response to endoplasmic reticulum stress	23444373.	ISO	Process
GO:0035437	maintenance of protein localization in endoplasmic reticulum	-	ISO	Process
GO:0040019	positive regulation of embryonic development	19816510.	TAS	Process
GO:0042026	protein refolding	21873635.	IBA	Process
GO:0042149	cellular response to glucose starvation	-	ISO	Process
GO:0042623	ATPase activity, coupled	21873635.	IBA	Function
GO:0043022	ribosome binding	12065409.	IDA	Function
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0044183	protein binding involved in protein folding	21873635.	IBA	Function
GO:0051082	unfolded protein binding	21873635.	IBA	Function
GO:0051082	unfolded protein binding	-	ISO	Function
GO:0051085	chaperone cofactor-dependent protein refolding	21873635.	IBA	Process
GO:0051603	proteolysis involved in cellular protein catabolic process	18923430.	IDA	Process
GO:0051787	misfolded protein binding	21873635.	IBA	Function
GO:0051787	misfolded protein binding	18923430.	IDA	Function
GO:0051787	misfolded protein binding	23444373.	ISO	Function
GO:0071353	cellular response to interleukin-4	9798653.	IDA	Process
GO:1901998	toxin transport	23716698.	IMP	Process