EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026918 (Gene tree)
Gene ID: 67382
Gene Symbol: Brd3
Alias: 2410084F24Rik|Fsrg2|ORFX|RINGL3
Full Name: bromodomain containing 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 62084
Position: chr2: 27445579-27507662
Accession: 1914632
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000138693	-	2221	-	ENSMUSP00000115755	682 (aa)	-	A2AKA9
ENSMUST00000126059	-	331	-	-	- (aa)	-	-
ENSMUST00000144758	-	563	-	-	- (aa)	-	-
ENSMUST00000077737	-	5272	-	ENSMUSP00000076918	726 (aa)	-	Q8K2F0
ENSMUST00000130932	-	2893	-	-	- (aa)	-	-
ENSMUST00000154316	-	2316	-	ENSMUSP00000114422	682 (aa)	-	A2AKA9
ENSMUST00000147736	-	437	-	ENSMUSP00000122009	90 (aa)	-	A2AKB0
ENSMUST00000028282	-	5419	XM_017319221	ENSMUSP00000028282	726 (aa)	XP_017174710	Q8K2F0
ENSMUST00000113941	-	5289	XM_006498249	ENSMUSP00000109574	743 (aa)	XP_006498312	Q8K2F0
ENSMUST00000164296	-	2791	-	ENSMUSP00000128812	726 (aa)	-	Q8K2F0

Gene Model

Click here to download ENSMUSG00000026918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026918's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026918	Brd3	100	94.505	ENSG00000169925	BRD3	100	93.243	Homo_sapiens
ENSMUSG00000026918	Brd3	88	80.952	ENSG00000204256	BRD2	88	67.769	Homo_sapiens
ENSMUSG00000026918	Brd3	91	75.904	ENSMUSG00000024335	Brd2	95	83.607	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003682	chromatin binding	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	IEA	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006357	regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0070577	lysine-acetylated histone binding	-	ISO	Function