EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026999 (Gene tree)
Gene ID: 69482
Gene Symbol: Nup35
Alias: 2310006I24Rik|5330402E05Rik
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 41671 bases
Position: chr2:80617236-80658906
Accession: 1916732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000028382	Nup35_RRM	PF05172.13	2.4e-26	1	1
ENSMUSP00000028382	Nup35_RRM_2	PF14605.6	3.4e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000028382	-	1559	-	ENSMUSP00000028382	325 (aa)	-	Q8R4R6
ENSMUST00000135305	-	2688	-	-	- (aa)	-	-
ENSMUST00000127926	-	692	-	-	- (aa)	-	-
ENSMUST00000144697	-	496	-	-	- (aa)	-	-
ENSMUST00000124377	-	653	-	ENSMUSP00000122132	197 (aa)	-	A2ATJ2

Gene Model

Click here to download ENSMUSG00000026999's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026999's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000026999	Nup35	100	100.000	ENSMUSG00000091900	Gm4353	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026999	Nup35	100	92.945	ENSG00000163002	NUP35	100	97.368	Homo_sapiens
ENSMUSG00000026999	Nup35	96	58.730	ENSAPOG00000003630	nup35	99	58.730	Acanthochromis_polyacanthus
ENSMUSG00000026999	Nup35	100	92.097	ENSAMEG00000001191	NUP35	100	92.097	Ailuropoda_melanoleuca
ENSMUSG00000026999	Nup35	79	59.533	ENSACIG00000023984	nup35	98	59.533	Amphilophus_citrinellus
ENSMUSG00000026999	Nup35	96	59.048	ENSAOCG00000007484	nup35	99	58.991	Amphiprion_ocellaris
ENSMUSG00000026999	Nup35	96	59.048	ENSAPEG00000020027	nup35	99	59.048	Amphiprion_percula
ENSMUSG00000026999	Nup35	96	59.425	ENSATEG00000019305	nup35	99	59.425	Anabas_testudineus
ENSMUSG00000026999	Nup35	99	82.407	ENSAPLG00000009161	NUP35	99	82.407	Anas_platyrhynchos
ENSMUSG00000026999	Nup35	100	78.419	ENSACAG00000008692	NUP35	100	78.419	Anolis_carolinensis
ENSMUSG00000026999	Nup35	100	91.718	ENSANAG00000021090	NUP35	100	91.718	Aotus_nancymaae
ENSMUSG00000026999	Nup35	96	57.492	ENSACLG00000013918	nup35	99	57.492	Astatotilapia_calliptera
ENSMUSG00000026999	Nup35	97	73.651	ENSAMXG00000003371	nup35	100	73.786	Astyanax_mexicanus
ENSMUSG00000026999	Nup35	100	93.272	ENSBTAG00000009777	NUP35	100	93.272	Bos_taurus
ENSMUSG00000026999	Nup35	100	92.638	ENSCJAG00000011104	NUP35	100	92.638	Callithrix_jacchus
ENSMUSG00000026999	Nup35	95	93.590	ENSCAFG00000031849	NUP35	100	93.590	Canis_familiaris
ENSMUSG00000026999	Nup35	100	92.705	ENSCAFG00020008408	NUP35	100	92.705	Canis_lupus_dingo
ENSMUSG00000026999	Nup35	95	93.871	ENSCHIG00000023148	NUP35	100	93.871	Capra_hircus
ENSMUSG00000026999	Nup35	100	92.000	ENSTSYG00000002117	NUP35	100	92.000	Carlito_syrichta
ENSMUSG00000026999	Nup35	100	75.380	ENSCAPG00000005703	NUP35	100	75.380	Cavia_aperea
ENSMUSG00000026999	Nup35	100	92.049	ENSCPOG00000011906	NUP35	100	92.049	Cavia_porcellus
ENSMUSG00000026999	Nup35	100	92.638	ENSCCAG00000025009	NUP35	100	92.638	Cebus_capucinus
ENSMUSG00000026999	Nup35	100	78.769	ENSCATG00000033109	NUP35	100	78.769	Cercocebus_atys
ENSMUSG00000026999	Nup35	100	91.437	ENSCLAG00000012559	NUP35	100	91.437	Chinchilla_lanigera
ENSMUSG00000026999	Nup35	100	92.638	ENSCSAG00000012620	NUP35	100	92.638	Chlorocebus_sabaeus
ENSMUSG00000026999	Nup35	100	83.792	ENSCPBG00000001303	NUP35	100	83.792	Chrysemys_picta_bellii
ENSMUSG00000026999	Nup35	95	41.693	ENSCING00000009659	-	97	41.693	Ciona_intestinalis
ENSMUSG00000026999	Nup35	95	44.380	ENSCSAVG00000007467	-	99	44.380	Ciona_savignyi
ENSMUSG00000026999	Nup35	100	92.638	ENSCANG00000030785	NUP35	100	93.204	Colobus_angolensis_palliatus
ENSMUSG00000026999	Nup35	100	96.308	ENSCGRG00001018638	-	100	96.308	Cricetulus_griseus_chok1gshd
ENSMUSG00000026999	Nup35	100	96.308	ENSCGRG00000011313	-	100	96.308	Cricetulus_griseus_crigri
ENSMUSG00000026999	Nup35	96	57.547	ENSCSEG00000000938	nup35	99	57.547	Cynoglossus_semilaevis
ENSMUSG00000026999	Nup35	96	59.365	ENSCVAG00000001792	nup35	99	59.365	Cyprinodon_variegatus
ENSMUSG00000026999	Nup35	95	71.197	ENSDARG00000012222	nup35	100	71.197	Danio_rerio
ENSMUSG00000026999	Nup35	100	92.355	ENSDNOG00000009513	-	88	92.355	Dasypus_novemcinctus
ENSMUSG00000026999	Nup35	100	91.743	ENSDNOG00000038754	-	100	91.743	Dasypus_novemcinctus
ENSMUSG00000026999	Nup35	100	92.025	ENSDORG00000010458	-	100	92.025	Dipodomys_ordii
ENSMUSG00000026999	Nup35	96	91.693	ENSETEG00000005896	NUP35	100	91.693	Echinops_telfairi
ENSMUSG00000026999	Nup35	96	54.462	ENSEBUG00000013034	nup35	99	54.799	Eptatretus_burgeri
ENSMUSG00000026999	Nup35	100	92.966	ENSEASG00005022100	NUP35	100	92.966	Equus_asinus_asinus
ENSMUSG00000026999	Nup35	99	92.638	ENSECAG00000003968	NUP35	100	92.903	Equus_caballus
ENSMUSG00000026999	Nup35	100	82.875	ENSEEUG00000008469	NUP35	100	82.875	Erinaceus_europaeus
ENSMUSG00000026999	Nup35	96	74.841	ENSELUG00000013693	nup35	100	74.839	Esox_lucius
ENSMUSG00000026999	Nup35	100	90.881	ENSFCAG00000025636	NUP35	100	91.987	Felis_catus
ENSMUSG00000026999	Nup35	100	80.793	ENSFALG00000013175	NUP35	100	80.793	Ficedula_albicollis
ENSMUSG00000026999	Nup35	100	92.025	ENSFDAG00000017998	NUP35	100	92.025	Fukomys_damarensis
ENSMUSG00000026999	Nup35	96	59.365	ENSFHEG00000010229	nup35	99	60.000	Fundulus_heteroclitus
ENSMUSG00000026999	Nup35	78	55.253	ENSGMOG00000003337	nup35	100	55.253	Gadus_morhua
ENSMUSG00000026999	Nup35	100	81.040	ENSGALG00000002689	NUP35	100	81.040	Gallus_gallus
ENSMUSG00000026999	Nup35	96	58.991	ENSGAFG00000022048	nup35	99	59.621	Gambusia_affinis
ENSMUSG00000026999	Nup35	96	58.786	ENSGACG00000008203	nup35	99	58.786	Gasterosteus_aculeatus
ENSMUSG00000026999	Nup35	95	85.209	ENSGAGG00000001967	NUP35	100	85.209	Gopherus_agassizii
ENSMUSG00000026999	Nup35	100	92.945	ENSGGOG00000009919	NUP35	100	92.945	Gorilla_gorilla
ENSMUSG00000026999	Nup35	100	92.049	ENSHGLG00000013230	NUP35	100	92.049	Heterocephalus_glaber_female
ENSMUSG00000026999	Nup35	96	77.460	ENSHGLG00000008616	-	96	77.460	Heterocephalus_glaber_female
ENSMUSG00000026999	Nup35	96	72.611	ENSHGLG00000000414	-	97	72.611	Heterocephalus_glaber_female
ENSMUSG00000026999	Nup35	96	77.460	ENSHGLG00100000091	-	96	77.460	Heterocephalus_glaber_male
ENSMUSG00000026999	Nup35	96	72.611	ENSHGLG00100010869	-	97	72.611	Heterocephalus_glaber_male
ENSMUSG00000026999	Nup35	100	92.049	ENSHGLG00100012840	NUP35	100	92.049	Heterocephalus_glaber_male
ENSMUSG00000026999	Nup35	96	58.413	ENSHCOG00000003882	nup35	99	58.413	Hippocampus_comes
ENSMUSG00000026999	Nup35	100	65.951	ENSIPUG00000002798	nup35	100	65.951	Ictalurus_punctatus
ENSMUSG00000026999	Nup35	100	93.846	ENSSTOG00000000711	NUP35	100	93.846	Ictidomys_tridecemlineatus
ENSMUSG00000026999	Nup35	100	92.945	ENSJJAG00000016432	-	100	92.945	Jaculus_jaculus
ENSMUSG00000026999	Nup35	99	85.047	ENSJJAG00000017434	-	99	85.047	Jaculus_jaculus
ENSMUSG00000026999	Nup35	100	78.528	ENSJJAG00000007003	-	98	78.528	Jaculus_jaculus
ENSMUSG00000026999	Nup35	85	85.921	ENSJJAG00000006387	-	93	85.921	Jaculus_jaculus
ENSMUSG00000026999	Nup35	96	57.233	ENSKMAG00000011162	nup35	98	58.176	Kryptolebias_marmoratus
ENSMUSG00000026999	Nup35	96	47.484	ENSLBEG00000012416	nup35	99	47.484	Labrus_bergylta
ENSMUSG00000026999	Nup35	95	78.778	ENSLACG00000008247	NUP35	100	78.778	Latimeria_chalumnae
ENSMUSG00000026999	Nup35	96	70.382	ENSLOCG00000006726	nup35	99	70.382	Lepisosteus_oculatus
ENSMUSG00000026999	Nup35	100	91.265	ENSLAFG00000008155	NUP35	100	91.265	Loxodonta_africana
ENSMUSG00000026999	Nup35	100	92.331	ENSMFAG00000000834	NUP35	100	92.880	Macaca_fascicularis
ENSMUSG00000026999	Nup35	100	92.638	ENSMMUG00000004140	NUP35	100	92.638	Macaca_mulatta
ENSMUSG00000026999	Nup35	100	92.638	ENSMNEG00000029014	NUP35	100	92.638	Macaca_nemestrina
ENSMUSG00000026999	Nup35	100	92.638	ENSMLEG00000035422	NUP35	100	93.204	Mandrillus_leucophaeus
ENSMUSG00000026999	Nup35	96	58.280	ENSMAMG00000013232	nup35	99	57.367	Mastacembelus_armatus
ENSMUSG00000026999	Nup35	97	58.385	ENSMZEG00005020619	nup35	95	58.385	Maylandia_zebra
ENSMUSG00000026999	Nup35	100	78.287	ENSMGAG00000004412	NUP35	100	78.287	Meleagris_gallopavo
ENSMUSG00000026999	Nup35	100	96.000	ENSMAUG00000013776	-	100	96.000	Mesocricetus_auratus
ENSMUSG00000026999	Nup35	100	93.272	ENSMICG00000006790	NUP35	100	93.871	Microcebus_murinus
ENSMUSG00000026999	Nup35	100	95.077	ENSMOCG00000014754	-	100	95.077	Microtus_ochrogaster
ENSMUSG00000026999	Nup35	97	56.918	ENSMMOG00000005026	nup35	99	57.006	Mola_mola
ENSMUSG00000026999	Nup35	100	86.769	ENSMODG00000010578	NUP35	100	86.769	Monodelphis_domestica
ENSMUSG00000026999	Nup35	96	58.360	ENSMALG00000020187	nup35	99	58.360	Monopterus_albus
ENSMUSG00000026999	Nup35	100	99.077	MGP_CAROLIEiJ_G0023709	-	100	99.077	Mus_caroli
ENSMUSG00000026999	Nup35	100	98.462	MGP_PahariEiJ_G0025160	-	100	98.462	Mus_pahari
ENSMUSG00000026999	Nup35	81	86.288	MGP_SPRETEiJ_G0033063	-	100	86.288	Mus_spretus
ENSMUSG00000026999	Nup35	100	92.705	ENSMPUG00000002063	NUP35	100	93.313	Mustela_putorius_furo
ENSMUSG00000026999	Nup35	100	92.355	ENSMLUG00000013154	NUP35	100	92.355	Myotis_lucifugus
ENSMUSG00000026999	Nup35	100	92.615	ENSNGAG00000012107	-	100	92.615	Nannospalax_galili
ENSMUSG00000026999	Nup35	96	57.729	ENSNBRG00000020466	nup35	97	58.675	Neolamprologus_brichardi
ENSMUSG00000026999	Nup35	100	92.945	ENSNLEG00000035026	NUP35	100	93.528	Nomascus_leucogenys
ENSMUSG00000026999	Nup35	65	64.789	ENSMEUG00000003001	-	65	64.789	Notamacropus_eugenii
ENSMUSG00000026999	Nup35	78	91.016	ENSOPRG00000016609	NUP35	78	91.016	Ochotona_princeps
ENSMUSG00000026999	Nup35	100	92.355	ENSODEG00000011202	-	100	92.355	Octodon_degus
ENSMUSG00000026999	Nup35	99	66.462	ENSODEG00000000280	-	99	66.462	Octodon_degus
ENSMUSG00000026999	Nup35	96	58.176	ENSONIG00000016251	nup35	99	57.055	Oreochromis_niloticus
ENSMUSG00000026999	Nup35	71	85.593	ENSOANG00000006793	-	97	85.593	Ornithorhynchus_anatinus
ENSMUSG00000026999	Nup35	100	93.272	ENSOCUG00000014407	NUP35	100	93.272	Oryctolagus_cuniculus
ENSMUSG00000026999	Nup35	96	58.991	ENSORLG00000013588	nup35	100	58.974	Oryzias_latipes
ENSMUSG00000026999	Nup35	96	58.991	ENSORLG00020008201	nup35	99	58.991	Oryzias_latipes_hni
ENSMUSG00000026999	Nup35	96	59.748	ENSORLG00015011096	nup35	100	59.744	Oryzias_latipes_hsok
ENSMUSG00000026999	Nup35	96	58.675	ENSOMEG00000007628	nup35	99	58.675	Oryzias_melastigma
ENSMUSG00000026999	Nup35	100	92.661	ENSOGAG00000011920	NUP35	100	92.661	Otolemur_garnettii
ENSMUSG00000026999	Nup35	100	94.190	ENSOARG00000016728	NUP35	100	94.190	Ovis_aries
ENSMUSG00000026999	Nup35	100	92.945	ENSPPAG00000036316	NUP35	100	93.528	Pan_paniscus
ENSMUSG00000026999	Nup35	100	90.881	ENSPPRG00000024726	NUP35	100	92.308	Panthera_pardus
ENSMUSG00000026999	Nup35	100	91.185	ENSPTIG00000017299	NUP35	100	91.793	Panthera_tigris_altaica
ENSMUSG00000026999	Nup35	100	92.945	ENSPTRG00000012711	NUP35	100	93.528	Pan_troglodytes
ENSMUSG00000026999	Nup35	100	92.638	ENSPANG00000013686	NUP35	100	92.638	Papio_anubis
ENSMUSG00000026999	Nup35	95	72.436	ENSPKIG00000022051	nup35	99	72.436	Paramormyrops_kingsleyae
ENSMUSG00000026999	Nup35	95	84.516	ENSPSIG00000002146	NUP35	100	84.516	Pelodiscus_sinensis
ENSMUSG00000026999	Nup35	95	57.051	ENSPMGG00000022915	nup35	97	57.188	Periophthalmus_magnuspinnatus
ENSMUSG00000026999	Nup35	100	96.615	ENSPEMG00000014718	-	100	96.615	Peromyscus_maniculatus_bairdii
ENSMUSG00000026999	Nup35	96	57.975	ENSPMAG00000006604	nup35	97	57.975	Petromyzon_marinus
ENSMUSG00000026999	Nup35	100	87.768	ENSPCIG00000015482	NUP35	100	87.768	Phascolarctos_cinereus
ENSMUSG00000026999	Nup35	96	58.675	ENSPFOG00000010020	nup35	99	59.306	Poecilia_formosa
ENSMUSG00000026999	Nup35	96	58.360	ENSPLAG00000005867	nup35	99	58.991	Poecilia_latipinna
ENSMUSG00000026999	Nup35	96	59.683	ENSPMEG00000010552	nup35	99	60.317	Poecilia_mexicana
ENSMUSG00000026999	Nup35	96	59.425	ENSPREG00000021005	nup35	99	60.064	Poecilia_reticulata
ENSMUSG00000026999	Nup35	100	92.638	ENSPPYG00000012998	-	80	92.638	Pongo_abelii
ENSMUSG00000026999	Nup35	96	64.856	ENSPCAG00000000605	NUP35	96	64.856	Procavia_capensis
ENSMUSG00000026999	Nup35	100	92.966	ENSPCOG00000024097	NUP35	100	92.966	Propithecus_coquereli
ENSMUSG00000026999	Nup35	100	93.578	ENSPVAG00000015908	NUP35	100	93.578	Pteropus_vampyrus
ENSMUSG00000026999	Nup35	97	58.696	ENSPNYG00000012486	nup35	95	58.696	Pundamilia_nyererei
ENSMUSG00000026999	Nup35	96	74.522	ENSPNAG00000005181	nup35	98	74.522	Pygocentrus_nattereri
ENSMUSG00000026999	Nup35	100	97.846	ENSRNOG00000009290	Nup35	100	97.846	Rattus_norvegicus
ENSMUSG00000026999	Nup35	100	92.638	ENSRBIG00000039427	NUP35	100	93.204	Rhinopithecus_bieti
ENSMUSG00000026999	Nup35	100	92.638	ENSRROG00000026525	NUP35	100	92.638	Rhinopithecus_roxellana
ENSMUSG00000026999	Nup35	100	92.331	ENSSBOG00000018676	NUP35	100	92.331	Saimiri_boliviensis_boliviensis
ENSMUSG00000026999	Nup35	100	86.850	ENSSHAG00000009746	NUP35	100	86.850	Sarcophilus_harrisii
ENSMUSG00000026999	Nup35	96	72.930	ENSSFOG00015002390	nup35	99	72.930	Scleropages_formosus
ENSMUSG00000026999	Nup35	96	57.827	ENSSMAG00000015651	nup35	99	57.827	Scophthalmus_maximus
ENSMUSG00000026999	Nup35	99	56.966	ENSSDUG00000013118	nup35	99	57.367	Seriola_dumerili
ENSMUSG00000026999	Nup35	96	58.466	ENSSLDG00000018249	nup35	98	58.466	Seriola_lalandi_dorsalis
ENSMUSG00000026999	Nup35	96	69.231	ENSSARG00000001535	-	100	69.231	Sorex_araneus
ENSMUSG00000026999	Nup35	100	80.428	ENSSPUG00000018651	NUP35	100	80.428	Sphenodon_punctatus
ENSMUSG00000026999	Nup35	96	59.306	ENSSPAG00000018264	nup35	99	59.306	Stegastes_partitus
ENSMUSG00000026999	Nup35	100	92.966	ENSSSCG00000028949	NUP35	100	92.966	Sus_scrofa
ENSMUSG00000026999	Nup35	100	79.331	ENSTGUG00000011278	NUP35	100	79.331	Taeniopygia_guttata
ENSMUSG00000026999	Nup35	90	55.290	ENSTRUG00000014111	nup35	99	55.290	Takifugu_rubripes
ENSMUSG00000026999	Nup35	98	51.572	ENSTNIG00000011568	nup35	97	51.572	Tetraodon_nigroviridis
ENSMUSG00000026999	Nup35	100	88.991	ENSTBEG00000003328	NUP35	100	88.991	Tupaia_belangeri
ENSMUSG00000026999	Nup35	100	79.385	ENSTTRG00000002512	NUP35	100	79.385	Tursiops_truncatus
ENSMUSG00000026999	Nup35	61	93.909	ENSUAMG00000018696	-	96	93.909	Ursus_americanus
ENSMUSG00000026999	Nup35	93	92.157	ENSUMAG00000017104	NUP35	100	92.810	Ursus_maritimus
ENSMUSG00000026999	Nup35	100	93.578	ENSVPAG00000011898	NUP35	100	93.578	Vicugna_pacos
ENSMUSG00000026999	Nup35	95	93.910	ENSVVUG00000016832	NUP35	100	93.910	Vulpes_vulpes
ENSMUSG00000026999	Nup35	100	64.848	ENSXETG00000001335	nup35	100	64.848	Xenopus_tropicalis
ENSMUSG00000026999	Nup35	96	58.991	ENSXMAG00000000409	nup35	99	59.621	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0005543	phospholipid binding	21873635.	IBA	Function
GO:0005652	nuclear lamina	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006607	NLS-bearing protein import into nucleus	21873635.	IBA	Process
GO:0006999	nuclear pore organization	21873635.	IBA	Process
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0031965	nuclear membrane	-	ISO	Component
GO:0042803	protein homodimerization activity	16962612.	IDA	Function
GO:0044613	nuclear pore central transport channel	21873635.	IBA	Component
GO:0044615	nuclear pore nuclear basket	21873635.	IBA	Component
GO:1990830	cellular response to leukemia inhibitory factor	20439489.	IEP	Process