EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027002 (Gene tree)
Gene ID: 50884
Gene Symbol: Nckap1
Alias: H19|Hem-2|Hem2|Nap1|mh19
Full Name: NCK-associated protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 80869
Position: chr2: 80500512-80581380
Accession: 1355333
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000134587	-	498	-	-	- (aa)	-	-
ENSMUST00000154793	-	687	-	-	- (aa)	-	-
ENSMUST00000131872	-	885	-	-	- (aa)	-	-
ENSMUST00000028386	-	4469	XM_006499882	ENSMUSP00000028386	1128 (aa)	-	P28660
ENSMUST00000111760	-	4597	XM_006499881	ENSMUSP00000107390	1134 (aa)	-	A2AS98

Gene Model

Click here to download ENSMUSG00000027002's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027002's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000902	cell morphogenesis	21873635.	IBA	Process
GO:0001701	in utero embryonic development	16831833.	IMP	Process
GO:0001726	ruffle	27927633.	IDA	Component
GO:0001756	somitogenesis	16831833.	IMP	Process
GO:0001843	neural tube closure	16831833.	IMP	Process
GO:0005515	protein binding	21946561.	IPI	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0007354	zygotic determination of anterior/posterior axis, embryo	16831833.	IMP	Process
GO:0007492	endoderm development	16831833.	IMP	Process
GO:0008078	mesodermal cell migration	16831833.	IMP	Process
GO:0010172	embryonic body morphogenesis	16831833.	IMP	Process
GO:0010592	positive regulation of lamellipodium assembly	27927633.	IDA	Process
GO:0010592	positive regulation of lamellipodium assembly	-	ISO	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016477	cell migration	21873635.	IBA	Process
GO:0016601	Rac protein signal transduction	-	ISO	Process
GO:0030027	lamellipodium	14765121.27927633.	IDA	Component
GO:0030031	cell projection assembly	21873635.	IBA	Process
GO:0030032	lamellipodium assembly	14765121.	IDA	Process
GO:0030032	lamellipodium assembly	16831833.	IMP	Process
GO:0030838	positive regulation of actin filament polymerization	27927633.	IDA	Process
GO:0030866	cortical actin cytoskeleton organization	21873635.	IBA	Process
GO:0030903	notochord development	16831833.	IMP	Process
GO:0030950	establishment or maintenance of actin cytoskeleton polarity	16831833.	IMP	Process
GO:0031209	SCAR complex	21873635.	IBA	Component
GO:0031209	SCAR complex	-	ISO	Component
GO:0031941	filamentous actin	27927633.	IDA	Component
GO:0032880	regulation of protein localization	16831833.	IMP	Process
GO:0035050	embryonic heart tube development	16831833.	IMP	Process
GO:0042074	cell migration involved in gastrulation	16831833.	IMP	Process
GO:0042995	cell projection	-	IEA	Component
GO:0045175	basal protein localization	16831833.	IDA	Process
GO:0045176	apical protein localization	16831833.	IDA	Process
GO:0048339	paraxial mesoderm development	16831833.	IMP	Process
GO:0048340	paraxial mesoderm morphogenesis	16831833.	IMP	Process
GO:0048365	Rac GTPase binding	21873635.	IBA	Function
GO:0048365	Rac GTPase binding	-	ISO	Function
GO:0048570	notochord morphogenesis	16831833.	IMP	Process
GO:0048617	embryonic foregut morphogenesis	16831833.	IMP	Process
GO:0048812	neuron projection morphogenesis	21873635.	IBA	Process
GO:0050821	protein stabilization	16831833.	IMP	Process
GO:0098794	postsynapse	24050404.	IDA	Component
GO:2000601	positive regulation of Arp2/3 complex-mediated actin nucleation	-	ISO	Process