EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027012 (Gene tree)
Gene ID: 13427
Gene Symbol: Dync1i2
Alias: 3110079H08Rik|Dncic2
Full Name: dynein cytoplasmic 1 intermediate chain 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 51598
Position: chr2: 71211706-71263303
Accession: 107750
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000149735	-	2248	-	-	- (aa)	-	-
ENSMUST00000137683	-	4523	-	-	- (aa)	-	-
ENSMUST00000112142	-	2585	XM_017315324	ENSMUSP00000107770	632 (aa)	XP_017170813	Q3TPJ8
ENSMUST00000112140	-	2573	XM_017315319	ENSMUSP00000107768	638 (aa)	XP_017170808	A2BFF9
ENSMUST00000112144	-	2565	XM_006498674	ENSMUSP00000107772	638 (aa)	XP_006498737	A2BFF9
ENSMUST00000141619	-	679	-	-	- (aa)	-	-
ENSMUST00000081710	-	2631	-	ENSMUSP00000080410	612 (aa)	-	O88487
ENSMUST00000112139	-	2483	XM_006498679	ENSMUSP00000107767	611 (aa)	XP_006498742	A2BFF8
ENSMUST00000112138	-	2466	-	ENSMUSP00000107766	612 (aa)	-	O88487
ENSMUST00000112136	-	2548	XM_006498676	ENSMUSP00000107764	637 (aa)	XP_006498739	A2BFF5
ENSMUST00000100028	-	2097	XM_006498677	ENSMUSP00000097605	632 (aa)	XP_006498740	Q3TPJ8
ENSMUST00000138613	-	812	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000027012's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04145	Phagosome	KEGG
mmu04962	Vasopressin-regulated water reabsorption	KEGG
mmu05132	Salmonella infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027012's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027012	Dync1i2	100	97.962	ENSG00000077380	DYNC1I2	100	97.962	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003774	motor activity	-	IEA	Function
GO:0005515	protein binding	22956769.	IPI	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005868	cytoplasmic dynein complex	21873635.	IBA	Component
GO:0005874	microtubule	-	IEA	Component
GO:0007018	microtubule-based movement	21873635.	IBA	Process
GO:0008574	ATP-dependent microtubule motor activity, plus-end-directed	21873635.	IBA	Function
GO:0010977	negative regulation of neuron projection development	-	ISO	Process
GO:0030286	dynein complex	21873635.	IBA	Component
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0045503	dynein light chain binding	21873635.	IBA	Function
GO:0045504	dynein heavy chain binding	21873635.	IBA	Function