EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000027014 (Gene tree)
Gene ID
80744
Gene Symbol
Cwc22
Alias
-
Full Name
CWC22 spliceosome-associated protein
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
65217 bases
Position
chr2:77881159-77946375
Accession
2136773
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000107455MA3PF02847.173.9e-2311
ENSMUSP00000107449MA3PF02847.175.4e-2311
ENSMUSP00000107450MA3PF02847.175.4e-2311
ENSMUSP00000064947MA3PF02847.175.5e-2311
ENSMUSP00000107452MA3PF02847.175.5e-2311
ENSMUSP00000107455MIF4GPF02854.192e-1211
ENSMUSP00000107449MIF4GPF02854.192.9e-1211
ENSMUSP00000107450MIF4GPF02854.192.9e-1211
ENSMUSP00000064947MIF4GPF02854.192.9e-1211
ENSMUSP00000107452MIF4GPF02854.192.9e-1211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000137494-2205--- (aa)--
ENSMUST00000149012-409--- (aa)--
ENSMUST00000111821-3388XM_006500434ENSMUSP00000107452908 (aa)XP_006500499Q8C5N3
ENSMUST00000128963-533-ENSMUSP00000115067109 (aa)-B1AYU9
ENSMUST00000111819-3090XM_006500437ENSMUSP00000107450903 (aa)XP_006500500B1AYU7
ENSMUST00000111818-3255XM_011239856ENSMUSP00000107449902 (aa)XP_011238158Q8C5N3
ENSMUST00000111824-2603-ENSMUSP00000107455723 (aa)-B1AYU4
ENSMUST00000065889-3471XM_006500433ENSMUSP00000064947908 (aa)XP_006500496Q8C5N3
ENSMUST00000139842-1066--- (aa)--
ENSMUST00000144727-2094--- (aa)--
ENSMUST00000127289-678-ENSMUSP00000122338139 (aa)-B1AYU8
ENSMUST00000127351-1877--- (aa)--
ENSMUST00000156863-511--- (aa)--
Gene Model
Click here to download ENSMUSG00000027014's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027014's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000027014Cwc229996.286ENSMUSG00000094336Gm136939996.739
ENSMUSG00000027014Cwc229996.286ENSMUSG00000096729Gm136959996.739
ENSMUSG00000027014Cwc229996.286ENSMUSG00000095824Gm136979996.739
ENSMUSG00000027014Cwc229996.286ENSMUSG00000094125Gm136989996.739
ENSMUSG00000027014Cwc229996.286ENSMUSG00000096484Gm136969996.739
ENSMUSG00000027014Cwc229996.286ENSMUSG00000079247Gm136919996.739
ENSMUSG00000027014Cwc229996.286ENSMUSG00000096337Gm136949996.739
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000027014Cwc229292.954ENSG00000163510CWC229987.802Homo_sapiens
ENSMUSG00000027014Cwc227979.791ENSAPOG00000004200cwc226580.379Acanthochromis_polyacanthus
ENSMUSG00000027014Cwc229292.504ENSAMEG00000011004CWC2210082.308Ailuropoda_melanoleuca
ENSMUSG00000027014Cwc228181.525ENSACIG00000020055cwc228570.483Amphilophus_citrinellus
ENSMUSG00000027014Cwc228780.255ENSAPEG00000002673cwc227275.942Amphiprion_percula
ENSMUSG00000027014Cwc228182.051ENSATEG00000005176cwc226476.631Anabas_testudineus
ENSMUSG00000027014Cwc229181.241ENSACAG00000009438CWC229469.428Anolis_carolinensis
ENSMUSG00000027014Cwc229292.492ENSANAG00000028324CWC2210082.068Aotus_nancymaae
ENSMUSG00000027014Cwc228182.222ENSACLG00000025447cwc229178.882Astatotilapia_calliptera
ENSMUSG00000027014Cwc225987.387ENSAMXG00000014957cwc226680.000Astyanax_mexicanus
ENSMUSG00000027014Cwc229292.654ENSBTAG00000021726CWC229981.278Bos_taurus
ENSMUSG00000027014Cwc227455.413WBGene00002957let-8586253.765Caenorhabditis_elegans
ENSMUSG00000027014Cwc229293.253ENSCAFG00000014160CWC229983.187Canis_familiaris
ENSMUSG00000027014Cwc229292.494ENSCAFG00020007223CWC229792.736Canis_lupus_dingo
ENSMUSG00000027014Cwc229292.504ENSCHIG00000017150CWC229981.278Capra_hircus
ENSMUSG00000027014Cwc229293.103ENSTSYG00000000218-10082.857Carlito_syrichta
ENSMUSG00000027014Cwc229574.681ENSTSYG00000028686-9872.938Carlito_syrichta
ENSMUSG00000027014Cwc228983.896ENSTSYG00000035591-9973.782Carlito_syrichta
ENSMUSG00000027014Cwc228681.410ENSTSYG00000026635-9670.012Carlito_syrichta
ENSMUSG00000027014Cwc228089.465ENSCAPG00000002064CWC229678.117Cavia_aperea
ENSMUSG00000027014Cwc229987.275ENSCPOG00000007492CWC2210081.042Cavia_porcellus
ENSMUSG00000027014Cwc229287.538ENSCCAG00000021239CWC2210077.888Cebus_capucinus
ENSMUSG00000027014Cwc229293.253ENSCATG00000035788CWC2210082.838Cercocebus_atys
ENSMUSG00000027014Cwc229292.771ENSCLAG00000011118CWC2210082.948Chinchilla_lanigera
ENSMUSG00000027014Cwc229293.253ENSCSAG00000012925CWC2210083.058Chlorocebus_sabaeus
ENSMUSG00000027014Cwc229283.483ENSCHOG00000006362CWC228883.234Choloepus_hoffmanni
ENSMUSG00000027014Cwc229184.036ENSCPBG00000001765CWC2210070.742Chrysemys_picta_bellii
ENSMUSG00000027014Cwc227668.058ENSCING00000008865-7168.165Ciona_intestinalis
ENSMUSG00000027014Cwc227766.667ENSCSAVG00000003537-8373.182Ciona_savignyi
ENSMUSG00000027014Cwc229293.553ENSCANG00000013762CWC2210082.618Colobus_angolensis_palliatus
ENSMUSG00000027014Cwc2210089.716ENSCGRG00001017005-10089.606Cricetulus_griseus_chok1gshd
ENSMUSG00000027014Cwc2210089.716ENSCGRG00000001934-10089.606Cricetulus_griseus_crigri
ENSMUSG00000027014Cwc227676.354ENSCSEG00000005257cwc226374.271Cynoglossus_semilaevis
ENSMUSG00000027014Cwc228081.443ENSCVAG00000009836cwc226476.169Cyprinodon_variegatus
ENSMUSG00000027014Cwc228082.444ENSDARG00000014008cwc226776.233Danio_rerio
ENSMUSG00000027014Cwc2210083.133ENSDNOG00000003020-10083.461Dasypus_novemcinctus
ENSMUSG00000027014Cwc229266.269ENSDNOG00000032640-9066.319Dasypus_novemcinctus
ENSMUSG00000027014Cwc229193.041ENSDORG00000011483-9982.412Dipodomys_ordii
ENSMUSG00000027014Cwc229280.960ENSETEG00000013355CWC229480.717Echinops_telfairi
ENSMUSG00000027014Cwc229293.403ENSEASG00005022287CWC229982.967Equus_asinus_asinus
ENSMUSG00000027014Cwc229293.553ENSECAG00000010769CWC229983.187Equus_caballus
ENSMUSG00000027014Cwc228294.346ENSEEUG00000005336CWC227893.684Erinaceus_europaeus
ENSMUSG00000027014Cwc228182.064ENSELUG00000010536cwc229179.304Esox_lucius
ENSMUSG00000027014Cwc229293.703ENSFCAG00000018982CWC229982.418Felis_catus
ENSMUSG00000027014Cwc229181.724ENSFALG00000003495CWC229968.811Ficedula_albicollis
ENSMUSG00000027014Cwc229292.319ENSFDAG00000010857CWC2210081.838Fukomys_damarensis
ENSMUSG00000027014Cwc227684.615ENSFHEG00000009620cwc227867.662Fundulus_heteroclitus
ENSMUSG00000027014Cwc228478.783ENSGMOG00000009084cwc229281.756Gadus_morhua
ENSMUSG00000027014Cwc229181.053ENSGALG00000009001CWC2210066.738Gallus_gallus
ENSMUSG00000027014Cwc227683.485ENSGAFG00000021155cwc227181.633Gambusia_affinis
ENSMUSG00000027014Cwc228181.709ENSGACG00000002071cwc226982.100Gasterosteus_aculeatus
ENSMUSG00000027014Cwc229183.183ENSGAGG00000013471CWC2210070.774Gopherus_agassizii
ENSMUSG00000027014Cwc229292.954ENSGGOG00000012484CWC2210082.527Gorilla_gorilla
ENSMUSG00000027014Cwc227981.898ENSHBUG00000010504cwc227377.294Haplochromis_burtoni
ENSMUSG00000027014Cwc229292.459ENSHGLG00000005692CWC2210081.486Heterocephalus_glaber_female
ENSMUSG00000027014Cwc229292.459ENSHGLG00100016497CWC229689.521Heterocephalus_glaber_male
ENSMUSG00000027014Cwc227782.437ENSHCOG00000004206cwc226881.174Hippocampus_comes
ENSMUSG00000027014Cwc227786.201ENSIPUG00000005831cwc227075.959Ictalurus_punctatus
ENSMUSG00000027014Cwc229292.793ENSSTOG00000009788CWC2210083.938Ictidomys_tridecemlineatus
ENSMUSG00000027014Cwc229293.835ENSJJAG00000017012-10083.938Jaculus_jaculus
ENSMUSG00000027014Cwc228280.743ENSKMAG00000005228cwc226475.799Kryptolebias_marmoratus
ENSMUSG00000027014Cwc228080.928ENSLBEG00000020518cwc229858.778Labrus_bergylta
ENSMUSG00000027014Cwc228379.236ENSLACG00000005916CWC226869.935Latimeria_chalumnae
ENSMUSG00000027014Cwc228084.364ENSLOCG00000006456cwc227075.948Lepisosteus_oculatus
ENSMUSG00000027014Cwc229291.754ENSLAFG00000014802CWC2210081.223Loxodonta_africana
ENSMUSG00000027014Cwc229293.233ENSMFAG00000000590CWC229983.746Macaca_fascicularis
ENSMUSG00000027014Cwc2210078.328ENSMMUG00000020642CWC2210078.328Macaca_mulatta
ENSMUSG00000027014Cwc229293.233ENSMNEG00000034567CWC2210082.838Macaca_nemestrina
ENSMUSG00000027014Cwc229293.253ENSMLEG00000042344CWC2210083.058Mandrillus_leucophaeus
ENSMUSG00000027014Cwc229375.668ENSMAMG00000018888cwc227174.532Mastacembelus_armatus
ENSMUSG00000027014Cwc228182.906ENSMZEG00005021449cwc226377.523Maylandia_zebra
ENSMUSG00000027014Cwc228484.754ENSMGAG00000009220CWC229968.263Meleagris_gallopavo
ENSMUSG00000027014Cwc227395.685ENSMAUG00000016154-9589.320Mesocricetus_auratus
ENSMUSG00000027014Cwc229193.778ENSMICG00000016919CWC229982.483Microcebus_murinus
ENSMUSG00000027014Cwc228474.388ENSMMOG00000019720cwc229272.409Mola_mola
ENSMUSG00000027014Cwc227682.727ENSMODG00000020117-9982.727Monodelphis_domestica
ENSMUSG00000027014Cwc229187.820ENSMODG00000010233-10075.960Monodelphis_domestica
ENSMUSG00000027014Cwc227880.961ENSMODG00000003711-10080.961Monodelphis_domestica
ENSMUSG00000027014Cwc2210097.928MGP_CAROLIEiJ_G0023696-10097.566Mus_caroli
ENSMUSG00000027014Cwc2210097.376MGP_PahariEiJ_G0025147-10096.128Mus_pahari
ENSMUSG00000027014Cwc229293.103ENSMPUG00000002432CWC229982.642Mustela_putorius_furo
ENSMUSG00000027014Cwc229192.006ENSMLUG00000024966-9586.508Myotis_lucifugus
ENSMUSG00000027014Cwc227797.487ENSMLUG00000013437-9883.515Myotis_lucifugus
ENSMUSG00000027014Cwc228890.984ENSNGAG00000013881-9890.984Nannospalax_galili
ENSMUSG00000027014Cwc225078.320ENSNBRG00000019380cwc229474.055Neolamprologus_brichardi
ENSMUSG00000027014Cwc229292.354ENSNLEG00000006248CWC2210082.088Nomascus_leucogenys
ENSMUSG00000027014Cwc227884.071ENSMEUG00000011026CWC229984.712Notamacropus_eugenii
ENSMUSG00000027014Cwc227497.234ENSOPRG00000007844CWC228485.784Ochotona_princeps
ENSMUSG00000027014Cwc228690.714ENSODEG00000007673CWC229993.739Octodon_degus
ENSMUSG00000027014Cwc227589.597ENSODEG00000005934-8389.076Octodon_degus
ENSMUSG00000027014Cwc229184.234ENSOANG00000008649CWC2210077.792Ornithorhynchus_anatinus
ENSMUSG00000027014Cwc228478.689ENSORLG00000010538cwc226876.947Oryzias_latipes
ENSMUSG00000027014Cwc228478.689ENSORLG00020015117cwc226876.947Oryzias_latipes_hni
ENSMUSG00000027014Cwc228479.378ENSORLG00015018073cwc226876.947Oryzias_latipes_hsok
ENSMUSG00000027014Cwc228182.021ENSOMEG00000015199cwc226876.417Oryzias_melastigma
ENSMUSG00000027014Cwc229192.846ENSOGAG00000015287CWC229982.111Otolemur_garnettii
ENSMUSG00000027014Cwc229292.515ENSOARG00000016905CWC229981.078Ovis_aries
ENSMUSG00000027014Cwc229192.998ENSPPAG00000027833CWC2210082.088Pan_paniscus
ENSMUSG00000027014Cwc229293.703ENSPPRG00000001389CWC229982.527Panthera_pardus
ENSMUSG00000027014Cwc229293.703ENSPTIG00000019139CWC229982.527Panthera_tigris_altaica
ENSMUSG00000027014Cwc229292.954ENSPTRG00000012698CWC2210082.418Pan_troglodytes
ENSMUSG00000027014Cwc229293.253ENSPANG00000018976CWC2210083.058Papio_anubis
ENSMUSG00000027014Cwc227884.806ENSPKIG00000021346cwc226880.171Paramormyrops_kingsleyae
ENSMUSG00000027014Cwc229481.223ENSPSIG00000008632CWC2210070.390Pelodiscus_sinensis
ENSMUSG00000027014Cwc228077.914ENSPMGG00000020129cwc226572.050Periophthalmus_magnuspinnatus
ENSMUSG00000027014Cwc229979.978ENSPEMG00000023936-9979.348Peromyscus_maniculatus_bairdii
ENSMUSG00000027014Cwc228178.741ENSPMAG00000005914cwc229665.815Petromyzon_marinus
ENSMUSG00000027014Cwc229188.404ENSPCIG00000009903-9189.006Phascolarctos_cinereus
ENSMUSG00000027014Cwc227785.125ENSPFOG00000015025cwc228777.225Poecilia_formosa
ENSMUSG00000027014Cwc227882.716ENSPLAG00000021405cwc227767.980Poecilia_latipinna
ENSMUSG00000027014Cwc227783.513ENSPMEG00000007850cwc228065.489Poecilia_mexicana
ENSMUSG00000027014Cwc227780.576ENSPREG00000004312cwc226878.114Poecilia_reticulata
ENSMUSG00000027014Cwc229292.954ENSPPYG00000012986CWC2210082.637Pongo_abelii
ENSMUSG00000027014Cwc229191.311ENSPCAG00000011882CWC229980.713Procavia_capensis
ENSMUSG00000027014Cwc229284.536ENSPCOG00000010195CWC2210069.138Propithecus_coquereli
ENSMUSG00000027014Cwc229291.004ENSPVAG00000011497CWC229982.398Pteropus_vampyrus
ENSMUSG00000027014Cwc228180.000ENSPNYG00000010435cwc229374.924Pundamilia_nyererei
ENSMUSG00000027014Cwc229990.376ENSRNOG00000012651Cwc2210090.597Rattus_norvegicus
ENSMUSG00000027014Cwc229990.000ENSRNOG00000038322LOC50068410090.177Rattus_norvegicus
ENSMUSG00000027014Cwc229188.128ENSRBIG00000036751CWC229978.738Rhinopithecus_bieti
ENSMUSG00000027014Cwc229293.253ENSRROG00000037520CWC2210082.728Rhinopithecus_roxellana
ENSMUSG00000027014Cwc226930.769YGR278W-8430.667Saccharomyces_cerevisiae
ENSMUSG00000027014Cwc229290.376ENSSBOG00000021683CWC2210080.396Saimiri_boliviensis_boliviensis
ENSMUSG00000027014Cwc229770.270ENSSHAG00000004040-9569.099Sarcophilus_harrisii
ENSMUSG00000027014Cwc228788.994ENSSHAG00000016596-9976.477Sarcophilus_harrisii
ENSMUSG00000027014Cwc227182.812ENSSFOG00015010559cwc226285.019Scleropages_formosus
ENSMUSG00000027014Cwc228178.291ENSSMAG00000004724cwc226673.152Scophthalmus_maximus
ENSMUSG00000027014Cwc228180.475ENSSDUG00000010656cwc226476.876Seriola_dumerili
ENSMUSG00000027014Cwc227782.826ENSSLDG00000023157cwc229176.982Seriola_lalandi_dorsalis
ENSMUSG00000027014Cwc227585.586ENSSARG00000013596-6985.586Sorex_araneus
ENSMUSG00000027014Cwc229079.052ENSSPUG00000006395CWC229968.032Sphenodon_punctatus
ENSMUSG00000027014Cwc228780.096ENSSPAG00000008746cwc227076.532Stegastes_partitus
ENSMUSG00000027014Cwc229292.504ENSSSCG00000016008CWC229981.339Sus_scrofa
ENSMUSG00000027014Cwc229082.362ENSTGUG00000009340-10069.397Taeniopygia_guttata
ENSMUSG00000027014Cwc228477.869ENSTRUG00000014411cwc226874.169Takifugu_rubripes
ENSMUSG00000027014Cwc227680.674ENSTNIG00000005074cwc228872.889Tetraodon_nigroviridis
ENSMUSG00000027014Cwc2210065.714ENSTBEG00000014539CWC229568.245Tupaia_belangeri
ENSMUSG00000027014Cwc229292.204ENSTTRG00000012142CWC229980.989Tursiops_truncatus
ENSMUSG00000027014Cwc229292.665ENSUAMG00000010342CWC229991.479Ursus_americanus
ENSMUSG00000027014Cwc229293.103ENSUMAG00000016730CWC229982.747Ursus_maritimus
ENSMUSG00000027014Cwc229293.103ENSVPAG00000008565CWC227392.825Vicugna_pacos
ENSMUSG00000027014Cwc229292.943ENSVVUG00000009738CWC229982.948Vulpes_vulpes
ENSMUSG00000027014Cwc228680.983ENSXETG00000014099cwc228680.238Xenopus_tropicalis
ENSMUSG00000027014Cwc227882.363ENSXMAG00000013201cwc226476.794Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome21873635.IBAProcess
GO:0000398mRNA splicing, via spliceosome-ISOProcess
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding-ISOFunction
GO:0005634nucleus-ISOComponent
GO:0005681spliceosomal complex-ISOComponent
GO:0005829cytosol-ISOComponent
GO:0006397mRNA processing-IEAProcess
GO:0008380RNA splicing-IEAProcess
GO:0016607nuclear speck-ISOComponent
GO:0071005U2-type precatalytic spliceosome-ISOComponent
GO:0071006U2-type catalytic step 1 spliceosome21873635.IBAComponent
GO:0071006U2-type catalytic step 1 spliceosome-ISOComponent
GO:0071007U2-type catalytic step 2 spliceosome-ISOComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent

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