EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027104 (Gene tree)
Gene ID: 11909
Gene Symbol: Atf2
Alias: ATF-2|CRE-BP|Creb2|D130078H02Rik|mXBP
Full Name: activating transcription factor 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 76131
Position: chr2: 73816509-73892639
Accession: 109349
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000154456	-	775	-	ENSMUSP00000118719	146 (aa)	-	A2AQF1
ENSMUST00000136958	-	935	-	ENSMUSP00000118357	207 (aa)	-	A2AQE9
ENSMUST00000129555	-	658	-	-	- (aa)	-	-
ENSMUST00000173010	-	1658	-	ENSMUSP00000133632	377 (aa)	-	G3UXC3
ENSMUST00000138098	-	656	-	-	- (aa)	-	-
ENSMUST00000156455	-	4003	-	-	- (aa)	-	-
ENSMUST00000124737	-	3151	-	ENSMUSP00000114828	212 (aa)	-	F6Z2B2
ENSMUST00000143714	-	3641	-	-	- (aa)	-	-
ENSMUST00000112010	-	4037	-	ENSMUSP00000107641	447 (aa)	-	P16951
ENSMUST00000154965	-	645	-	-	- (aa)	-	-
ENSMUST00000055833	-	4210	-	ENSMUSP00000058521	487 (aa)	-	P16951
ENSMUST00000112007	-	4195	-	ENSMUSP00000107638	447 (aa)	-	P16951
ENSMUST00000128531	-	863	-	ENSMUSP00000118560	228 (aa)	-	A2AQF0
ENSMUST00000125159	-	660	-	-	- (aa)	-	-
ENSMUST00000090802	-	4016	-	ENSMUSP00000088311	447 (aa)	-	P16951
ENSMUST00000141050	-	1604	-	-	- (aa)	-	-
ENSMUST00000100009	-	3936	-	ENSMUSP00000097588	487 (aa)	-	P16951
ENSMUST00000112016	-	3943	-	ENSMUSP00000107647	389 (aa)	-	P16951
ENSMUST00000112017	-	2396	-	ENSMUSP00000107648	487 (aa)	-	P16951

Gene Model

Click here to download ENSMUSG00000027104's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04010	MAPK signaling pathway	KEGG
mmu04022	cGMP-PKG signaling pathway	KEGG
mmu04151	PI3K-Akt signaling pathway	KEGG
mmu04211	Longevity regulating pathway	KEGG
mmu04261	Adrenergic signaling in cardiomyocytes	KEGG
mmu04668	TNF signaling pathway	KEGG
mmu04714	Thermogenesis	KEGG
mmu04728	Dopaminergic synapse	KEGG
mmu04911	Insulin secretion	KEGG
mmu04915	Estrogen signaling pathway	KEGG
mmu04918	Thyroid hormone synthesis	KEGG
mmu04922	Glucagon signaling pathway	KEGG
mmu04925	Aldosterone synthesis and secretion	KEGG
mmu04926	Relaxin signaling pathway	KEGG
mmu04927	Cortisol synthesis and secretion	KEGG
mmu04928	Parathyroid hormone synthesis, secretion and action	KEGG
mmu04934	Cushing syndrome	KEGG
mmu05030	Cocaine addiction	KEGG
mmu05031	Amphetamine addiction	KEGG
mmu05034	Alcoholism	KEGG
mmu05161	Hepatitis B	KEGG
mmu05163	Human cytomegalovirus infection	KEGG
mmu05166	Human T-cell leukemia virus 1 infection	KEGG
mmu05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027104's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	-	ISO	Function
GO:0000980	RNA polymerase II distal enhancer sequence-specific DNA binding	-	ISO	Function
GO:0001102	RNA polymerase II activating transcription factor binding	-	ISO	Function
GO:0001158	enhancer sequence-specific DNA binding	-	ISO	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	19948881.	IDA	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	-	ISO	Function
GO:0003151	outflow tract morphogenesis	17767158.	IMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	12220541.	IDA	Function
GO:0003682	chromatin binding	17767158.	IDA	Function
GO:0003700	DNA-binding transcription factor activity	8798441.	ISO	Function
GO:0004402	histone acetyltransferase activity	-	IEA	Function
GO:0005515	protein binding	7774816.9524124.11231009.	IPI	Function
GO:0005634	nucleus	19948881.	IDA	Component
GO:0005634	nucleus	8798441.	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005741	mitochondrial outer membrane	-	ISO	Component
GO:0006355	regulation of transcription, DNA-templated	-	ISO	Process
GO:0006357	regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0006970	response to osmotic stress	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	15916964.	IMP	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0008134	transcription factor binding	-	ISO	Function
GO:0008140	cAMP response element binding protein binding	-	ISO	Function
GO:0010628	positive regulation of gene expression	-	ISO	Process
GO:0016020	membrane	15030387.	IDA	Component
GO:0016525	negative regulation of angiogenesis	-	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0019901	protein kinase binding	-	ISO	Function
GO:0031573	intra-S DNA damage checkpoint	-	ISO	Process
GO:0032915	positive regulation of transforming growth factor beta2 production	17767158.	IMP	Process
GO:0035497	cAMP response element binding	-	ISO	Function
GO:0035861	site of double-strand break	15916964.	IMP	Component
GO:0035861	site of double-strand break	-	ISO	Component
GO:0043525	positive regulation of neuron apoptotic process	-	ISO	Process
GO:0043565	sequence-specific DNA binding	15916964.	IMP	Function
GO:0043565	sequence-specific DNA binding	-	ISO	Function
GO:0045444	fat cell differentiation	19948881.	IGI	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	19948881.	IGI	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0046982	protein heterodimerization activity	-	ISO	Function
GO:0050680	negative regulation of epithelial cell proliferation	-	ISO	Process
GO:0051091	positive regulation of DNA-binding transcription factor activity	-	ISO	Process
GO:0060612	adipose tissue development	19948881.	IGI	Process
GO:0097186	amelogenesis	-	ISO	Process
GO:0110024	positive regulation of cardiac muscle myoblast proliferation	-	ISO	Process
GO:1902110	positive regulation of mitochondrial membrane permeability involved in apoptotic process	-	ISO	Process