EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027193 (Gene tree)
Gene ID: 11800
Gene Symbol: Api5
Alias: AAC-11
Full Name: apoptosis inhibitor 5
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 26455
Position: chr2: 94411682-94438136
Accession: 1888993
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000144390	-	1308	-	-	- (aa)	-	-
ENSMUST00000152454	-	1659	-	-	- (aa)	-	-
ENSMUST00000150930	-	730	-	-	- (aa)	-	-
ENSMUST00000028617	-	3736	XM_006498589	ENSMUSP00000028617	504 (aa)	XP_006498652	O35841

Gene Model

Click here to download ENSMUSG00000027193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027193's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027193	Api5	99	82.903	ENSDARG00000033597	api5	95	82.903	Danio_rerio
ENSMUSG00000027193	Api5	99	45.769	FBgn0027885	Aac11	96	45.769	Drosophila_melanogaster
ENSMUSG00000027193	Api5	100	98.413	ENSG00000166181	API5	100	98.413	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005681	spliceosomal complex	11555636.	IDA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006915	apoptotic process	-	IEA	Process
GO:0016607	nuclear speck	-	ISO	Component
GO:0017134	fibroblast growth factor binding	-	ISO	Function
GO:0043066	negative regulation of apoptotic process	21873635.	IBA	Process
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:2000270	negative regulation of fibroblast apoptotic process	9307294.	IDA	Process