EuRBPDB

Description

Ensembl ID: ENSMUSG00000027199 (Gene tree)
Gene ID: 67092
Gene Symbol: Gatm
Alias: 1810003P21Rik
Full Name: glycine amidinotransferase (L-arginine:glycine amidinotransferase)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 16837
Position: chr2: 122594467-122611303
Accession: 1914342
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000140808	-	797	-	-	- (aa)	-	-
ENSMUST00000028624	-	2389	-	ENSMUSP00000028624	423 (aa)	-	Q9D964
ENSMUST00000154598	-	510	-	-	- (aa)	-	-

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu00260	Glycine, serine and threonine metabolism	KEGG
mmu00330	Arginine and proline metabolism	KEGG
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005743	mitochondrial inner membrane	-	IEA	Component
GO:0005758	mitochondrial intermembrane space	-	ISO	Component
GO:0006600	creatine metabolic process	-	ISO	Process
GO:0006601	creatine biosynthetic process	21873635.	IBA	Process
GO:0006601	creatine biosynthetic process	-	ISO	Process
GO:0007275	multicellular organism development	-	ISO	Process
GO:0007584	response to nutrient	-	ISO	Process
GO:0007611	learning or memory	-	ISO	Process
GO:0010033	response to organic substance	-	ISO	Process
GO:0014889	muscle atrophy	-	ISO	Process
GO:0015067	amidinotransferase activity	21873635.	IBA	Function
GO:0015067	amidinotransferase activity	-	ISO	Function
GO:0015068	glycine amidinotransferase activity	-	ISO	Function
GO:0016020	membrane	-	IEA	Component
GO:0016740	transferase activity	-	IEA	Function
GO:0043434	response to peptide hormone	-	ISO	Process
GO:0046689	response to mercury ion	-	ISO	Process
GO:0120162	positive regulation of cold-induced thermogenesis	28844881.	IMP	Process