EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000027201 (Gene tree)
Gene ID
17876
Gene Symbol
Myef2
Alias
-
Full Name
myelin basic protein expression factor 2%2C repressor
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
39034 bases
Position
chr2:125084628-125123661
Accession
104592
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000114817RRM_1PF00076.221.9e-5513
ENSMUSP00000114817RRM_1PF00076.221.9e-5523
ENSMUSP00000114817RRM_1PF00076.221.9e-5533
ENSMUSP00000115519RRM_1PF00076.222.2e-5513
ENSMUSP00000115519RRM_1PF00076.222.2e-5523
ENSMUSP00000115519RRM_1PF00076.222.2e-5533
ENSMUSP00000066312RRM_1PF00076.222.3e-5513
ENSMUSP00000066312RRM_1PF00076.222.3e-5523
ENSMUSP00000066312RRM_1PF00076.222.3e-5533
ENSMUSP00000087258RRM_1PF00076.222.5e-5513
ENSMUSP00000087258RRM_1PF00076.222.5e-5523
ENSMUSP00000087258RRM_1PF00076.222.5e-5533
ENSMUSP00000123088RRM_1PF00076.222.6e-5513
ENSMUSP00000123088RRM_1PF00076.222.6e-5523
ENSMUSP00000123088RRM_1PF00076.222.6e-5533
ENSMUSP00000123222RRM_1PF00076.223.7e-4012
ENSMUSP00000123222RRM_1PF00076.223.7e-4022
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
25993413Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle ProgressionIC & MEF2015Boucas JDOI: 10.1371/journal.pone.0125745
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseRBDmap & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000147105-2928-ENSMUSP00000114817550 (aa)-A2ATP5
ENSMUST00000137091-1337-ENSMUSP00000123222446 (aa)-F6XJA1
ENSMUST00000149911-1801--- (aa)--
ENSMUST00000129945-3424--- (aa)--
ENSMUST00000089825-1631-ENSMUSP00000087258530 (aa)-G8JL68
ENSMUST00000110501-2333-ENSMUSP00000106127574 (aa)-Q8C854
ENSMUST00000142718-2942-ENSMUSP00000115519567 (aa)-A2ATP6
ENSMUST00000067780-2999XM_006498884ENSMUSP00000066312574 (aa)XP_006498947Q8C854
ENSMUST00000152367-2071XM_017316131ENSMUSP00000123088591 (aa)XP_017171620Q8C854
Gene Model
Click here to download ENSMUSG00000027201's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027201's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000027201Myef29952.088ENSMUSG00000059208Hnrnpm9659.322
ENSMUSG00000027201Myef299100.000ENSMUSG00000049230Gm98339793.217
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000027201Myef210090.500ENSG00000104177MYEF29996.000Homo_sapiens
ENSMUSG00000027201Myef29963.430ENSAPOG00000015050myef29866.316Acanthochromis_polyacanthus
ENSMUSG00000027201Myef29991.575ENSAMEG00000001964MYEF210093.750Ailuropoda_melanoleuca
ENSMUSG00000027201Myef29865.283ENSACIG00000020446myef29862.742Amphilophus_citrinellus
ENSMUSG00000027201Myef29964.092ENSAOCG00000017431myef29866.200Amphiprion_ocellaris
ENSMUSG00000027201Myef29963.883ENSAPEG00000024834myef29866.025Amphiprion_percula
ENSMUSG00000027201Myef29962.971ENSATEG00000017892myef29666.192Anabas_testudineus
ENSMUSG00000027201Myef29977.256ENSAPLG00000008935MYEF29980.144Anas_platyrhynchos
ENSMUSG00000027201Myef29969.661ENSACAG00000004806MYEF210069.811Anolis_carolinensis
ENSMUSG00000027201Myef210091.167ENSANAG00000036558MYEF210091.500Aotus_nancymaae
ENSMUSG00000027201Myef29862.430ENSACLG00000017421myef210062.115Astatotilapia_calliptera
ENSMUSG00000027201Myef29961.413ENSAMXG00000038244myef29567.082Astyanax_mexicanus
ENSMUSG00000027201Myef29995.034ENSBTAG00000008771MYEF210091.500Bos_taurus
ENSMUSG00000027201Myef29994.707ENSCJAG00000001875MYEF210091.167Callithrix_jacchus
ENSMUSG00000027201Myef29894.064ENSCAFG00000014008MYEF210093.636Canis_familiaris
ENSMUSG00000027201Myef27492.453ENSCAFG00020022004-9792.248Canis_lupus_dingo
ENSMUSG00000027201Myef29989.888ENSCHIG00000022164MYEF210089.907Capra_hircus
ENSMUSG00000027201Myef210092.154ENSTSYG00000010575MYEF210095.064Carlito_syrichta
ENSMUSG00000027201Myef29890.682ENSCAPG00000017762MYEF29990.682Cavia_aperea
ENSMUSG00000027201Myef29889.091ENSCPOG00000010584MYEF29989.091Cavia_porcellus
ENSMUSG00000027201Myef210091.500ENSCCAG00000033878MYEF210094.881Cebus_capucinus
ENSMUSG00000027201Myef210091.000ENSCATG00000039268MYEF210094.333Cercocebus_atys
ENSMUSG00000027201Myef29994.007ENSCLAG00000008328MYEF29994.064Chinchilla_lanigera
ENSMUSG00000027201Myef210090.667ENSCSAG00000010366MYEF210090.667Chlorocebus_sabaeus
ENSMUSG00000027201Myef28390.476ENSCHOG00000011348-7090.476Choloepus_hoffmanni
ENSMUSG00000027201Myef29981.099ENSCPBG00000024789MYEF210077.683Chrysemys_picta_bellii
ENSMUSG00000027201Myef210091.167ENSCANG00000022275MYEF210094.516Colobus_angolensis_palliatus
ENSMUSG00000027201Myef210098.432ENSCGRG00001024080-10098.432Cricetulus_griseus_chok1gshd
ENSMUSG00000027201Myef29998.866ENSCGRG00000012257-10098.866Cricetulus_griseus_crigri
ENSMUSG00000027201Myef29862.594ENSCSEG00000005597myef29164.461Cynoglossus_semilaevis
ENSMUSG00000027201Myef26467.742ENSCVAG00000010801myef27961.176Cyprinodon_variegatus
ENSMUSG00000027201Myef29962.976ENSDARG00000059398myef29764.464Danio_rerio
ENSMUSG00000027201Myef210090.435ENSDNOG00000038711MYEF210090.435Dasypus_novemcinctus
ENSMUSG00000027201Myef29990.573ENSDORG00000015835-10093.530Dipodomys_ordii
ENSMUSG00000027201Myef29379.765ENSETEG00000005360MYEF210083.765Echinops_telfairi
ENSMUSG00000027201Myef27378.571ENSEBUG00000016563myef28951.171Eptatretus_burgeri
ENSMUSG00000027201Myef29990.075ENSEASG00005017818MYEF210087.245Equus_asinus_asinus
ENSMUSG00000027201Myef29991.758ENSECAG00000034546-10091.500Equus_caballus
ENSMUSG00000027201Myef29991.758ENSECAG00000005741MYEF210091.500Equus_caballus
ENSMUSG00000027201Myef275100.000ENSEEUG00000006405MYEF269100.000Erinaceus_europaeus
ENSMUSG00000027201Myef29861.468ENSELUG00000003712myef28167.797Esox_lucius
ENSMUSG00000027201Myef29991.941ENSFCAG00000027198MYEF210092.361Felis_catus
ENSMUSG00000027201Myef29976.715ENSFALG00000011565MYEF29979.603Ficedula_albicollis
ENSMUSG00000027201Myef29995.274ENSFDAG00000007098MYEF210095.274Fukomys_damarensis
ENSMUSG00000027201Myef29861.060ENSFHEG00000002386myef210062.287Fundulus_heteroclitus
ENSMUSG00000027201Myef27273.041ENSGMOG00000008489myef29961.279Gadus_morhua
ENSMUSG00000027201Myef29977.117ENSGALG00000032546MYEF210075.201Gallus_gallus
ENSMUSG00000027201Myef29962.047ENSGAFG00000005838myef29664.685Gambusia_affinis
ENSMUSG00000027201Myef29863.321ENSGACG00000016759myef210066.667Gasterosteus_aculeatus
ENSMUSG00000027201Myef29980.220ENSGAGG00000015265MYEF210074.497Gopherus_agassizii
ENSMUSG00000027201Myef210091.167ENSGGOG00000014968MYEF210094.516Gorilla_gorilla
ENSMUSG00000027201Myef29963.732ENSHBUG00000015847myef29667.027Haplochromis_burtoni
ENSMUSG00000027201Myef29992.135ENSHGLG00000018166MYEF29993.607Heterocephalus_glaber_female
ENSMUSG00000027201Myef29989.279ENSHGLG00100014102MYEF210092.891Heterocephalus_glaber_male
ENSMUSG00000027201Myef29960.644ENSHCOG00000001652myef29764.171Hippocampus_comes
ENSMUSG00000027201Myef29959.252ENSIPUG00000018589myef29662.101Ictalurus_punctatus
ENSMUSG00000027201Myef29995.463ENSSTOG00000007740MYEF210095.463Ictidomys_tridecemlineatus
ENSMUSG00000027201Myef29990.741ENSJJAG00000015428-10093.365Jaculus_jaculus
ENSMUSG00000027201Myef29965.022ENSKMAG00000002383myef29666.726Kryptolebias_marmoratus
ENSMUSG00000027201Myef29964.366ENSLBEG00000005649myef29664.652Labrus_bergylta
ENSMUSG00000027201Myef29384.354ENSLACG00000006382MYEF210069.620Latimeria_chalumnae
ENSMUSG00000027201Myef29177.879ENSLOCG00000013241myef29869.402Lepisosteus_oculatus
ENSMUSG00000027201Myef29993.679ENSLAFG00000012990MYEF210090.985Loxodonta_africana
ENSMUSG00000027201Myef210091.000ENSMFAG00000046361MYEF210094.333Macaca_fascicularis
ENSMUSG00000027201Myef29993.258ENSMMUG00000018834MYEF29993.258Macaca_mulatta
ENSMUSG00000027201Myef210091.000ENSMNEG00000028845MYEF210091.000Macaca_nemestrina
ENSMUSG00000027201Myef210091.000ENSMLEG00000038724MYEF210094.333Mandrillus_leucophaeus
ENSMUSG00000027201Myef29963.941ENSMAMG00000011476myef29666.788Mastacembelus_armatus
ENSMUSG00000027201Myef29863.388ENSMZEG00005011832myef29666.549Maylandia_zebra
ENSMUSG00000027201Myef29976.937ENSMGAG00000006915MYEF29980.180Meleagris_gallopavo
ENSMUSG00000027201Myef210097.909ENSMAUG00000019642-10097.909Mesocricetus_auratus
ENSMUSG00000027201Myef210091.348ENSMICG00000014513MYEF210094.881Microcebus_murinus
ENSMUSG00000027201Myef210097.387ENSMOCG00000006917-10097.387Microtus_ochrogaster
ENSMUSG00000027201Myef26484.834ENSMOCG00000021295-10084.834Microtus_ochrogaster
ENSMUSG00000027201Myef29859.117ENSMMOG00000021557myef29760.037Mola_mola
ENSMUSG00000027201Myef210074.215ENSMODG00000002744MYEF28374.380Monodelphis_domestica
ENSMUSG00000027201Myef29859.065ENSMALG00000012193myef29662.741Monopterus_albus
ENSMUSG00000027201Myef210099.831MGP_CAROLIEiJ_G0024222Myef2100100.000Mus_caroli
ENSMUSG00000027201Myef210099.831MGP_PahariEiJ_G0025667Myef2100100.000Mus_pahari
ENSMUSG00000027201Myef28598.571MGP_PahariEiJ_G0025668-9998.571Mus_pahari
ENSMUSG00000027201Myef27389.375MGP_SPRETEiJ_G0025142-9989.375Mus_spretus
ENSMUSG00000027201Myef2100100.000MGP_SPRETEiJ_G0025141Myef2100100.000Mus_spretus
ENSMUSG00000027201Myef29987.934ENSMPUG00000011254MYEF210090.364Mustela_putorius_furo
ENSMUSG00000027201Myef29894.412ENSMLUG00000006781MYEF210086.167Myotis_lucifugus
ENSMUSG00000027201Myef29995.652ENSNGAG00000010756-10094.261Nannospalax_galili
ENSMUSG00000027201Myef29862.430ENSNBRG00000023602myef29665.922Neolamprologus_brichardi
ENSMUSG00000027201Myef210090.500ENSNLEG00000005951MYEF210094.333Nomascus_leucogenys
ENSMUSG00000027201Myef27495.219ENSMEUG00000015210-8381.073Notamacropus_eugenii
ENSMUSG00000027201Myef29196.226ENSOPRG00000003919MYEF28596.226Ochotona_princeps
ENSMUSG00000027201Myef29992.322ENSODEG00000007463MYEF29992.184Octodon_degus
ENSMUSG00000027201Myef29860.966ENSONIG00000013374myef29662.619Oreochromis_niloticus
ENSMUSG00000027201Myef29971.344ENSOANG00000007375MYEF210074.704Ornithorhynchus_anatinus
ENSMUSG00000027201Myef29992.857ENSOCUG00000013043MYEF29793.482Oryctolagus_cuniculus
ENSMUSG00000027201Myef29962.996ENSORLG00000002730myef29665.426Oryzias_latipes
ENSMUSG00000027201Myef29962.816ENSORLG00020021524myef29665.248Oryzias_latipes_hni
ENSMUSG00000027201Myef29962.996ENSORLG00015020877myef29665.310Oryzias_latipes_hsok
ENSMUSG00000027201Myef29959.058ENSOMEG00000010072myef29961.579Oryzias_melastigma
ENSMUSG00000027201Myef210091.514ENSOGAG00000010907MYEF210091.514Otolemur_garnettii
ENSMUSG00000027201Myef29992.308ENSOARG00000021027MYEF210094.718Ovis_aries
ENSMUSG00000027201Myef29991.493ENSPPAG00000041556MYEF210094.322Pan_paniscus
ENSMUSG00000027201Myef29991.941ENSPPRG00000011446MYEF210094.313Panthera_pardus
ENSMUSG00000027201Myef29991.941ENSPTIG00000018122MYEF210093.601Panthera_tigris_altaica
ENSMUSG00000027201Myef210091.000ENSPTRG00000007042MYEF210094.333Pan_troglodytes
ENSMUSG00000027201Myef210091.000ENSPANG00000017757MYEF210091.000Papio_anubis
ENSMUSG00000027201Myef29961.852ENSPKIG00000018344MYEF29465.637Paramormyrops_kingsleyae
ENSMUSG00000027201Myef27671.014ENSPKIG00000020643myef28571.014Paramormyrops_kingsleyae
ENSMUSG00000027201Myef29978.919ENSPSIG00000016637MYEF29882.384Pelodiscus_sinensis
ENSMUSG00000027201Myef28668.333ENSPMGG00000001513myef28868.333Periophthalmus_magnuspinnatus
ENSMUSG00000027201Myef29997.164ENSPEMG00000006286-10097.164Peromyscus_maniculatus_bairdii
ENSMUSG00000027201Myef26472.941ENSPMAG00000001364myef29044.660Petromyzon_marinus
ENSMUSG00000027201Myef29993.168ENSPCIG00000022902MYEF210085.430Phascolarctos_cinereus
ENSMUSG00000027201Myef29858.957ENSPFOG00000001754myef29661.695Poecilia_formosa
ENSMUSG00000027201Myef29859.636ENSPLAG00000001538myef29664.014Poecilia_latipinna
ENSMUSG00000027201Myef29859.818ENSPLAG00000001814MYEF29565.472Poecilia_latipinna
ENSMUSG00000027201Myef29859.818ENSPMEG00000014953MYEF29663.834Poecilia_mexicana
ENSMUSG00000027201Myef29859.818ENSPMEG00000014250myef29663.834Poecilia_mexicana
ENSMUSG00000027201Myef29960.841ENSPREG00000010801myef29664.088Poecilia_reticulata
ENSMUSG00000027201Myef210091.000ENSPPYG00000006452MYEF210091.000Pongo_abelii
ENSMUSG00000027201Myef29989.154ENSPCAG00000016660MYEF210088.481Procavia_capensis
ENSMUSG00000027201Myef210091.514ENSPCOG00000024570MYEF210094.881Propithecus_coquereli
ENSMUSG00000027201Myef29991.667ENSPVAG00000004102MYEF210091.575Pteropus_vampyrus
ENSMUSG00000027201Myef29863.602ENSPNYG00000010879myef29666.284Pundamilia_nyererei
ENSMUSG00000027201Myef29276.667ENSPNAG00000026387myef29976.667Pygocentrus_nattereri
ENSMUSG00000027201Myef210098.985ENSRNOG00000005258Myef210098.985Rattus_norvegicus
ENSMUSG00000027201Myef210091.167ENSRBIG00000037503MYEF210094.516Rhinopithecus_bieti
ENSMUSG00000027201Myef210091.167ENSRROG00000042861MYEF210094.516Rhinopithecus_roxellana
ENSMUSG00000027201Myef29991.941ENSSBOG00000029634MYEF210095.238Saimiri_boliviensis_boliviensis
ENSMUSG00000027201Myef29987.363ENSSHAG00000011695MYEF29991.026Sarcophilus_harrisii
ENSMUSG00000027201Myef29856.926ENSSFOG00015017915myef29757.757Scleropages_formosus
ENSMUSG00000027201Myef29963.853ENSSFOG00015012981myef29565.993Scleropages_formosus
ENSMUSG00000027201Myef29862.023ENSSMAG00000021279myef29867.153Scophthalmus_maximus
ENSMUSG00000027201Myef29865.756ENSSDUG00000015983myef29866.960Seriola_dumerili
ENSMUSG00000027201Myef26459.794ENSSLDG00000021862myef29361.137Seriola_lalandi_dorsalis
ENSMUSG00000027201Myef29389.916ENSSARG00000003264MYEF210093.277Sorex_araneus
ENSMUSG00000027201Myef29974.733ENSSPUG00000011966MYEF210077.358Sphenodon_punctatus
ENSMUSG00000027201Myef29960.373ENSSPAG00000021514myef29865.263Stegastes_partitus
ENSMUSG00000027201Myef210091.333ENSSSCG00000004661MYEF29994.444Sus_scrofa
ENSMUSG00000027201Myef29976.854ENSTGUG00000007130MYEF210079.783Taeniopygia_guttata
ENSMUSG00000027201Myef29864.190ENSTRUG00000016967myef28868.116Takifugu_rubripes
ENSMUSG00000027201Myef29865.074ENSTNIG00000009526myef29668.345Tetraodon_nigroviridis
ENSMUSG00000027201Myef26899.174ENSTBEG00000002187MYEF26399.174Tupaia_belangeri
ENSMUSG00000027201Myef29992.308ENSTTRG00000008076MYEF29992.530Tursiops_truncatus
ENSMUSG00000027201Myef29989.139ENSUAMG00000020099MYEF210092.611Ursus_americanus
ENSMUSG00000027201Myef29993.006ENSUMAG00000009804MYEF210092.611Ursus_maritimus
ENSMUSG00000027201Myef29992.491ENSVPAG00000004721MYEF210095.421Vicugna_pacos
ENSMUSG00000027201Myef29988.951ENSVVUG00000014591MYEF210093.750Vulpes_vulpes
ENSMUSG00000027201Myef29873.669ENSXETG00000018412myef29567.000Xenopus_tropicalis
ENSMUSG00000027201Myef29861.738ENSXMAG00000016686myef29664.695Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II7539003.IDAProcess
GO:0000978RNA polymerase II proximal promoter sequence-specific DNA binding21873635.IBAFunction
GO:0000978RNA polymerase II proximal promoter sequence-specific DNA binding7539003.IDAFunction
GO:0001227DNA-binding transcription repressor activity, RNA polymerase II-specific7539003.IDAFunction
GO:0003729mRNA binding21873635.IBAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus-ISOComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0071014post-mRNA release spliceosomal complex21873635.IBAComponent
GO:1990904ribonucleoprotein complex21873635.IBAComponent
GO:2000815regulation of mRNA stability involved in response to oxidative stress21873635.IBAProcess

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