EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027206 (Gene tree)
Gene ID: 12848
Gene Symbol: Cops2
Alias: Csn2|Sgn2|Trip15|alien homologue|alien-like
Full Name: COP9 signalosome subunit 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 28836
Position: chr2: 125830304-125859139
Accession: 1330276
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000139343	-	417	-	-	- (aa)	-	-
ENSMUST00000028635	-	2073	-	ENSMUSP00000028635	443 (aa)	-	P61202
ENSMUST00000110463	-	3392	-	ENSMUSP00000106090	450 (aa)	-	P61202
ENSMUST00000110462	-	1853	-	ENSMUSP00000106089	402 (aa)	-	A2AQE4
ENSMUST00000152683	-	355	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000027206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027206's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027206	Cops2	100	100.000	ENSG00000166200	COPS2	100	100.000	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0001833	inner cell mass cell proliferation	12972599.	IMP	Process
GO:0003714	transcription corepressor activity	21873635.	IBA	Function
GO:0003714	transcription corepressor activity	15062575.	IDA	Function
GO:0005515	protein binding	9707402.12522100.	IPI	Function
GO:0005634	nucleus	12522100.12606288.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0008180	COP9 signalosome	21873635.	IBA	Component
GO:0008180	COP9 signalosome	9707402.	IDA	Component
GO:0008283	cell proliferation	12972599.	IMP	Process
GO:0030182	neuron differentiation	-	ISO	Process
GO:0035914	skeletal muscle cell differentiation	22147266.	IMP	Process
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045892	negative regulation of transcription, DNA-templated	15062575.	IDA	Process
GO:1903507	negative regulation of nucleic acid-templated transcription	-	ISO	Process