EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000027236 (Gene tree)
Gene ID
78655
Gene Symbol
Eif3j1
Alias
1810016I04Rik|2700079K05Rik|Eif3j|Eif3s1|eIF3-alpha|eIF3-p35
Full Name
eukaryotic translation initiation factor 3%2C subunit J1
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
28053 bases
Position
chr2:122028546-122056598
Accession
1925905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000028668eIF3_subunitPF08597.108.5e-6311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000028668-5413-ENSMUSP00000028668261 (aa)-Q3UGC7
ENSMUST00000142747-594--- (aa)--
Gene Model
Click here to download ENSMUSG00000027236's gene model file
Pathways
Pathway IDPathway NameSource
mmu03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027236's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000027236Eif3j199100.000ENSMUSG00000043424Eif3j299100.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000027236Eif3j19896.887ENSG00000104131EIF3J9998.276Homo_sapiens
ENSMUSG00000027236Eif3j19463.200ENSAPOG00000010317eif3jb9963.600Acanthochromis_polyacanthus
ENSMUSG00000027236Eif3j19997.287ENSAMEG00000015104EIF3J9997.287Ailuropoda_melanoleuca
ENSMUSG00000027236Eif3j19362.348ENSACIG00000006469eif3jb9962.753Amphilophus_citrinellus
ENSMUSG00000027236Eif3j19464.257ENSAOCG00000014984eif3jb9965.060Amphiprion_ocellaris
ENSMUSG00000027236Eif3j19464.659ENSAPEG00000015854eif3jb9965.462Amphiprion_percula
ENSMUSG00000027236Eif3j19464.659ENSATEG00000008562eif3jb9965.600Anabas_testudineus
ENSMUSG00000027236Eif3j16291.925ENSAPLG00000008484EIF3J10091.925Anas_platyrhynchos
ENSMUSG00000027236Eif3j18480.455ENSACAG00000013759EIF3J9477.928Anolis_carolinensis
ENSMUSG00000027236Eif3j19896.471ENSANAG00000019682EIF3J9996.471Aotus_nancymaae
ENSMUSG00000027236Eif3j19282.917ENSANAG00000035652-9678.776Aotus_nancymaae
ENSMUSG00000027236Eif3j19363.710ENSACLG00000026284eif3jb9964.516Astatotilapia_calliptera
ENSMUSG00000027236Eif3j19666.798ENSAMXG00000030386eif3ja9867.600Astyanax_mexicanus
ENSMUSG00000027236Eif3j19659.533ENSAMXG00000034194eif3jb9958.366Astyanax_mexicanus
ENSMUSG00000027236Eif3j19897.255ENSBTAG00000000359EIF3J9997.255Bos_taurus
ENSMUSG00000027236Eif3j19996.139ENSCJAG00000002412EIF3J9996.139Callithrix_jacchus
ENSMUSG00000027236Eif3j19997.287ENSCAFG00000013577EIF3J9997.287Canis_familiaris
ENSMUSG00000027236Eif3j19991.120ENSCAFG00020022194EIF3J9891.120Canis_lupus_dingo
ENSMUSG00000027236Eif3j19690.400ENSCHIG00000023791EIF3J9790.400Capra_hircus
ENSMUSG00000027236Eif3j19989.615ENSCHIG00000022155-9793.033Capra_hircus
ENSMUSG00000027236Eif3j19094.492ENSTSYG00000013685EIF3J10094.492Carlito_syrichta
ENSMUSG00000027236Eif3j110096.169ENSCPOG00000012396EIF3J9996.169Cavia_porcellus
ENSMUSG00000027236Eif3j16385.366ENSCCAG00000036406-8577.720Cebus_capucinus
ENSMUSG00000027236Eif3j19978.682ENSCCAG00000014291-9572.000Cebus_capucinus
ENSMUSG00000027236Eif3j19896.471ENSCCAG00000028410EIF3J9996.471Cebus_capucinus
ENSMUSG00000027236Eif3j19897.276ENSCATG00000033376EIF3J9997.276Cercocebus_atys
ENSMUSG00000027236Eif3j18098.086ENSCLAG00000017286EIF3J10098.086Chinchilla_lanigera
ENSMUSG00000027236Eif3j19896.498ENSCSAG00000018642-9996.498Chlorocebus_sabaeus
ENSMUSG00000027236Eif3j19678.175ENSCPBG00000025162EIF3J9978.088Chrysemys_picta_bellii
ENSMUSG00000027236Eif3j19535.200ENSCING00000020776-9738.400Ciona_intestinalis
ENSMUSG00000027236Eif3j19436.694ENSCSAVG00000003021-9736.842Ciona_savignyi
ENSMUSG00000027236Eif3j19896.124ENSCANG00000036763EIF3J9996.124Colobus_angolensis_palliatus
ENSMUSG00000027236Eif3j110097.701ENSCGRG00001009334-10097.701Cricetulus_griseus_chok1gshd
ENSMUSG00000027236Eif3j18196.682ENSCGRG00000016980-6496.682Cricetulus_griseus_crigri
ENSMUSG00000027236Eif3j19463.008ENSCSEG00000002171eif3jb9964.777Cynoglossus_semilaevis
ENSMUSG00000027236Eif3j19652.400ENSCVAG00000016639eif3jb9950.400Cyprinodon_variegatus
ENSMUSG00000027236Eif3j19658.303ENSDARG00000053370eif3jb9956.554Danio_rerio
ENSMUSG00000027236Eif3j19666.798ENSDARG00000012603eif3ja9965.613Danio_rerio
ENSMUSG00000027236Eif3j19693.651ENSDNOG00000042545EIF3J9495.238Dasypus_novemcinctus
ENSMUSG00000027236Eif3j19540.161FBgn0027619eIF3j9939.044Drosophila_melanogaster
ENSMUSG00000027236Eif3j18074.163ENSETEG00000005052EIF3J10074.163Echinops_telfairi
ENSMUSG00000027236Eif3j19644.841ENSEBUG00000001522eif3jb9943.651Eptatretus_burgeri
ENSMUSG00000027236Eif3j19891.829ENSEASG00005018015EIF3J9891.829Equus_asinus_asinus
ENSMUSG00000027236Eif3j18095.714ENSEEUG00000000932EIF3J10095.714Erinaceus_europaeus
ENSMUSG00000027236Eif3j19665.476ENSELUG00000005499eif3ja9962.302Esox_lucius
ENSMUSG00000027236Eif3j19663.281ENSELUG00000017273eif3jb9964.062Esox_lucius
ENSMUSG00000027236Eif3j19898.039ENSFCAG00000034878EIF3J9998.039Felis_catus
ENSMUSG00000027236Eif3j18180.189ENSFALG00000004996EIF3J9975.225Ficedula_albicollis
ENSMUSG00000027236Eif3j18095.694ENSFDAG00000006854EIF3J9397.423Fukomys_damarensis
ENSMUSG00000027236Eif3j19465.714ENSFHEG00000019467eif3jb9966.667Fundulus_heteroclitus
ENSMUSG00000027236Eif3j19458.400ENSGMOG00000016027eif3jb9958.400Gadus_morhua
ENSMUSG00000027236Eif3j19552.016ENSGMOG00000018865-9847.791Gadus_morhua
ENSMUSG00000027236Eif3j19680.159ENSGALG00000008187EIF3J9979.681Gallus_gallus
ENSMUSG00000027236Eif3j19465.447ENSGAFG00000013574eif3jb9965.992Gambusia_affinis
ENSMUSG00000027236Eif3j19461.753ENSGACG00000015551eif3jb9965.351Gasterosteus_aculeatus
ENSMUSG00000027236Eif3j19278.423ENSGAGG00000015010EIF3J9878.313Gopherus_agassizii
ENSMUSG00000027236Eif3j18698.214ENSGGOG00000000548EIF3J10098.214Gorilla_gorilla
ENSMUSG00000027236Eif3j19464.659ENSHBUG00000014433eif3jb9965.462Haplochromis_burtoni
ENSMUSG00000027236Eif3j19785.375ENSHGLG00000020813-9785.772Heterocephalus_glaber_female
ENSMUSG00000027236Eif3j19971.923ENSHGLG00000003445-9477.108Heterocephalus_glaber_female
ENSMUSG00000027236Eif3j19996.139ENSHGLG00000015053-9996.139Heterocephalus_glaber_female
ENSMUSG00000027236Eif3j19368.313ENSHGLG00000003602-9469.547Heterocephalus_glaber_female
ENSMUSG00000027236Eif3j19483.265ENSHGLG00100019163-9683.613Heterocephalus_glaber_male
ENSMUSG00000027236Eif3j19969.615ENSHGLG00100008711-9473.494Heterocephalus_glaber_male
ENSMUSG00000027236Eif3j18096.172ENSHGLG00100007538-10096.172Heterocephalus_glaber_male
ENSMUSG00000027236Eif3j19971.154ENSHGLG00100007247-9568.800Heterocephalus_glaber_male
ENSMUSG00000027236Eif3j19461.789ENSHCOG00000008338eif3jb9965.041Hippocampus_comes
ENSMUSG00000027236Eif3j19653.125ENSIPUG00000015427eif3jb9953.125Ictalurus_punctatus
ENSMUSG00000027236Eif3j19665.217ENSIPUG00000020304eif3ja9965.217Ictalurus_punctatus
ENSMUSG00000027236Eif3j19996.538ENSSTOG00000025483EIF3J9996.538Ictidomys_tridecemlineatus
ENSMUSG00000027236Eif3j19665.476ENSKMAG00000002556eif3jb9166.534Kryptolebias_marmoratus
ENSMUSG00000027236Eif3j19462.651ENSLBEG00000001665eif3jb9961.446Labrus_bergylta
ENSMUSG00000027236Eif3j19863.462ENSLACG00000011985EIF3J9864.314Latimeria_chalumnae
ENSMUSG00000027236Eif3j19772.835ENSLOCG00000013769eif3ja9773.307Lepisosteus_oculatus
ENSMUSG00000027236Eif3j18097.129ENSLAFG00000009268EIF3J10097.129Loxodonta_africana
ENSMUSG00000027236Eif3j19897.276ENSMFAG00000031049EIF3J9997.276Macaca_fascicularis
ENSMUSG00000027236Eif3j19897.276ENSMMUG00000014288EIF3J9997.276Macaca_mulatta
ENSMUSG00000027236Eif3j19897.276ENSMNEG00000022347EIF3J9997.276Macaca_nemestrina
ENSMUSG00000027236Eif3j18098.086ENSMLEG00000040280EIF3J10098.086Mandrillus_leucophaeus
ENSMUSG00000027236Eif3j19463.745ENSMAMG00000000869eif3jb9962.550Mastacembelus_armatus
ENSMUSG00000027236Eif3j19465.060ENSMZEG00005001694eif3jb9965.060Maylandia_zebra
ENSMUSG00000027236Eif3j18085.714ENSMGAG00000010307EIF3J10082.432Meleagris_gallopavo
ENSMUSG00000027236Eif3j110098.084ENSMAUG00000019190-10098.084Mesocricetus_auratus
ENSMUSG00000027236Eif3j19871.053ENSMICG00000026531-9672.481Microcebus_murinus
ENSMUSG00000027236Eif3j19895.736ENSMICG00000005006-9995.736Microcebus_murinus
ENSMUSG00000027236Eif3j110096.552ENSMOCG00000022505-10096.552Microtus_ochrogaster
ENSMUSG00000027236Eif3j19354.251ENSMMOG00000017326eif3jb9959.109Mola_mola
ENSMUSG00000027236Eif3j110057.358ENSMALG00000018222eif3jb9459.600Monopterus_albus
ENSMUSG00000027236Eif3j165100.000MGP_CAROLIEiJ_G0024202-99100.000Mus_caroli
ENSMUSG00000027236Eif3j19999.228MGP_CAROLIEiJ_G0024201-9999.228Mus_caroli
ENSMUSG00000027236Eif3j19998.456MGP_PahariEiJ_G0025645-9998.456Mus_pahari
ENSMUSG00000027236Eif3j16598.000MGP_PahariEiJ_G0025646-9998.000Mus_pahari
ENSMUSG00000027236Eif3j15093.130MGP_SPRETEiJ_G0025120-8993.130Mus_spretus
ENSMUSG00000027236Eif3j18083.732ENSMPUG00000010765EIF3J9783.251Mustela_putorius_furo
ENSMUSG00000027236Eif3j19694.000ENSMLUG00000023600EIF3J9594.000Myotis_lucifugus
ENSMUSG00000027236Eif3j110098.084ENSNGAG00000017917-10098.084Nannospalax_galili
ENSMUSG00000027236Eif3j19560.700ENSNBRG00000014228eif3jb9861.479Neolamprologus_brichardi
ENSMUSG00000027236Eif3j19877.432ENSNLEG00000031859-9676.587Nomascus_leucogenys
ENSMUSG00000027236Eif3j19997.287ENSNLEG00000005568EIF3J9997.287Nomascus_leucogenys
ENSMUSG00000027236Eif3j16493.976ENSMEUG00000010372EIF3J8695.804Notamacropus_eugenii
ENSMUSG00000027236Eif3j16474.096ENSOPRG00000001978-9374.096Ochotona_princeps
ENSMUSG00000027236Eif3j15579.720ENSODEG00000000653-7586.301Octodon_degus
ENSMUSG00000027236Eif3j17991.220ENSODEG00000019255-9193.434Octodon_degus
ENSMUSG00000027236Eif3j110094.636ENSODEG00000018669-10094.636Octodon_degus
ENSMUSG00000027236Eif3j19395.492ENSODEG00000016386-9795.492Octodon_degus
ENSMUSG00000027236Eif3j19463.855ENSONIG00000006245eif3jb9964.257Oreochromis_niloticus
ENSMUSG00000027236Eif3j18085.514ENSOANG00000007805-8790.769Ornithorhynchus_anatinus
ENSMUSG00000027236Eif3j19889.844ENSOCUG00000005376EIF3J9791.600Oryctolagus_cuniculus
ENSMUSG00000027236Eif3j19361.943ENSORLG00000006244eif3jb9861.943Oryzias_latipes
ENSMUSG00000027236Eif3j19461.694ENSORLG00020013628eif3jb9261.694Oryzias_latipes_hni
ENSMUSG00000027236Eif3j19460.081ENSORLG00015012204eif3jb9261.694Oryzias_latipes_hsok
ENSMUSG00000027236Eif3j19461.355ENSOMEG00000019427eif3jb9859.231Oryzias_melastigma
ENSMUSG00000027236Eif3j19896.109ENSOGAG00000004694EIF3J9896.109Otolemur_garnettii
ENSMUSG00000027236Eif3j18095.694ENSOARG00000003638EIF3J9397.423Ovis_aries
ENSMUSG00000027236Eif3j19897.647ENSPPRG00000001550EIF3J9997.647Panthera_pardus
ENSMUSG00000027236Eif3j19997.287ENSPTRG00000051845EIF3J9997.287Pan_troglodytes
ENSMUSG00000027236Eif3j19997.287ENSPANG00000018029EIF3J9997.287Papio_anubis
ENSMUSG00000027236Eif3j19664.368ENSPKIG00000015047-9964.368Paramormyrops_kingsleyae
ENSMUSG00000027236Eif3j19658.392ENSPKIG00000016009EIF3J9958.246Paramormyrops_kingsleyae
ENSMUSG00000027236Eif3j16192.500ENSPSIG00000007786EIF3J10076.923Pelodiscus_sinensis
ENSMUSG00000027236Eif3j19354.800ENSPMGG00000004930eif3jb9957.200Periophthalmus_magnuspinnatus
ENSMUSG00000027236Eif3j15751.316ENSPMAG00000000533eif3jb10050.000Petromyzon_marinus
ENSMUSG00000027236Eif3j19787.402ENSPCIG00000018265-9587.200Phascolarctos_cinereus
ENSMUSG00000027236Eif3j19665.476ENSPFOG00000003061eif3jb9965.737Poecilia_formosa
ENSMUSG00000027236Eif3j19466.122ENSPLAG00000013586eif3jb9966.667Poecilia_latipinna
ENSMUSG00000027236Eif3j19466.260ENSPMEG00000007601eif3jb9966.260Poecilia_mexicana
ENSMUSG00000027236Eif3j19466.397ENSPREG00000022834eif3jb9967.206Poecilia_reticulata
ENSMUSG00000027236Eif3j19688.800ENSPPYG00000006431EIF3J9788.400Pongo_abelii
ENSMUSG00000027236Eif3j19896.887ENSPCAG00000016156EIF3J9996.887Procavia_capensis
ENSMUSG00000027236Eif3j19678.400ENSPCOG00000021934EIF3J9678.000Propithecus_coquereli
ENSMUSG00000027236Eif3j19996.899ENSPVAG00000014177EIF3J9996.899Pteropus_vampyrus
ENSMUSG00000027236Eif3j19361.943ENSPNYG00000006813eif3jb9962.753Pundamilia_nyererei
ENSMUSG00000027236Eif3j19667.984ENSPNAG00000017022eif3ja9967.984Pygocentrus_nattereri
ENSMUSG00000027236Eif3j19654.615ENSPNAG00000013230eif3jb9953.462Pygocentrus_nattereri
ENSMUSG00000027236Eif3j19999.612ENSRNOG00000016459Eif3j9999.612Rattus_norvegicus
ENSMUSG00000027236Eif3j18098.086ENSRBIG00000044268EIF3J10098.086Rhinopithecus_bieti
ENSMUSG00000027236Eif3j17987.500ENSRROG00000028981-8888.500Rhinopithecus_roxellana
ENSMUSG00000027236Eif3j110080.460ENSRROG00000029397-9583.133Rhinopithecus_roxellana
ENSMUSG00000027236Eif3j19296.250ENSSBOG00000035282EIF3J9795.984Saimiri_boliviensis_boliviensis
ENSMUSG00000027236Eif3j19665.339ENSSBOG00000032137-9260.630Saimiri_boliviensis_boliviensis
ENSMUSG00000027236Eif3j18491.781ENSSHAG00000016772EIF3J8995.876Sarcophilus_harrisii
ENSMUSG00000027236Eif3j19665.600ENSSFOG00015015383EIF3J9965.600Scleropages_formosus
ENSMUSG00000027236Eif3j19762.738ENSSFOG00015024043eif3j9961.508Scleropages_formosus
ENSMUSG00000027236Eif3j19360.484ENSSMAG00000021380eif3jb9160.729Scophthalmus_maximus
ENSMUSG00000027236Eif3j19657.874ENSSDUG00000008165eif3jb9965.200Seriola_dumerili
ENSMUSG00000027236Eif3j19463.200ENSSLDG00000000656eif3jb9964.000Seriola_lalandi_dorsalis
ENSMUSG00000027236Eif3j19695.200ENSSARG00000005130EIF3J9795.200Sorex_araneus
ENSMUSG00000027236Eif3j19865.134ENSSPAG00000019827eif3jb9966.667Stegastes_partitus
ENSMUSG00000027236Eif3j19991.120ENSSSCG00000004691EIF3J9297.895Sus_scrofa
ENSMUSG00000027236Eif3j18167.453ENSTGUG00000009878EIF3J9963.063Taeniopygia_guttata
ENSMUSG00000027236Eif3j17759.024ENSTRUG00000017281eif3jb6257.143Takifugu_rubripes
ENSMUSG00000027236Eif3j19463.347ENSTNIG00000009400eif3jb9763.347Tetraodon_nigroviridis
ENSMUSG00000027236Eif3j19690.400ENSTBEG00000013922EIF3J9790.400Tupaia_belangeri
ENSMUSG00000027236Eif3j17094.536ENSTTRG00000015233EIF3J9795.082Tursiops_truncatus
ENSMUSG00000027236Eif3j19891.406ENSUAMG00000028179EIF3J9991.406Ursus_americanus
ENSMUSG00000027236Eif3j18098.565ENSVPAG00000006308EIF3J10098.565Vicugna_pacos
ENSMUSG00000027236Eif3j19891.440ENSVVUG00000010868EIF3J9891.440Vulpes_vulpes
ENSMUSG00000027236Eif3j19965.038ENSXETG00000007840eif3j9661.923Xenopus_tropicalis
ENSMUSG00000027236Eif3j17268.041ENSXCOG00000011013eif3jb9567.500Xiphophorus_couchianus
ENSMUSG00000027236Eif3j19662.934ENSXMAG00000001192eif3jb9963.953Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005829cytosol-ISOComponent
GO:0005852eukaryotic translation initiation factor 3 complex21873635.IBAComponent
GO:0005852eukaryotic translation initiation factor 3 complex-ISOComponent

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