EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027248 (Gene tree)
Gene ID: 14827
Gene Symbol: Pdia3
Alias: ERp57|ERp60|ERp61|Erp|Grp58|PDI|PDI-Q2|Plca
Full Name: protein disulfide isomerase associated 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 24913
Position: chr2: 121413775-121438687
Accession: 95834
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000130450	-	736	-	-	- (aa)	-	-
ENSMUST00000135079	-	722	-	ENSMUSP00000119337	124 (aa)	-	F6Q404
ENSMUST00000153378	-	400	-	-	- (aa)	-	-
ENSMUST00000028683	-	2770	-	ENSMUSP00000028683	505 (aa)	-	P27773

Gene Model

Click here to download ENSMUSG00000027248's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04141	Protein processing in endoplasmic reticulum	KEGG
mmu04612	Antigen processing and presentation	KEGG
mmu05163	Human cytomegalovirus infection	KEGG
mmu05168	Herpes simplex virus 1 infection	KEGG
mmu05169	Epstein-Barr virus infection	KEGG
mmu05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027248's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027248	Pdia3	100	93.069	ENSG00000167004	PDIA3	100	93.069	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001669	acrosomal vesicle	-	ISO	Component
GO:0003756	protein disulfide isomerase activity	21873635.	IBA	Function
GO:0005515	protein binding	21093319.23395171.	IPI	Function
GO:0005576	extracellular region	-	ISO	Component
GO:0005615	extracellular space	-	ISO	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005758	mitochondrial intermembrane space	-	ISO	Component
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005783	endoplasmic reticulum	9493907.	IDA	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005790	smooth endoplasmic reticulum	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006457	protein folding	21873635.	IBA	Process
GO:0008233	peptidase activity	-	ISO	Function
GO:0009986	cell surface	21873635.	IBA	Component
GO:0009986	cell surface	19995400.	IDA	Component
GO:0009986	cell surface	-	ISO	Component
GO:0015037	peptide disulfide oxidoreductase activity	-	ISO	Function
GO:0016324	apical plasma membrane	-	ISO	Component
GO:0016853	isomerase activity	-	IEA	Function
GO:0019153	protein-disulfide reductase (glutathione) activity	-	ISO	Function
GO:0034976	response to endoplasmic reticulum stress	21873635.	IBA	Process
GO:0042288	MHC class I protein binding	-	ISO	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0042824	MHC class I peptide loading complex	-	ISO	Component
GO:0042825	TAP complex	-	ISO	Component
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0045454	cell redox homeostasis	-	IEA	Process
GO:0071305	cellular response to vitamin D	-	ISO	Process
GO:0098761	cellular response to interleukin-7	29581031.	IDA	Process
GO:1903334	positive regulation of protein folding	-	ISO	Process
GO:2001238	positive regulation of extrinsic apoptotic signaling pathway	15858817.	IMP	Process