EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027288 (Gene tree)
Gene ID: 20402
Gene Symbol: Zfp106
Alias: Cd-1|H3a|Sh3bp3|sirm
Full Name: zinc finger protein 106
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 57024
Position: chr2: 120506820-120563843
Accession: 1270153
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000167241	-	505	-	ENSMUSP00000127803	168 (aa)	-	F6SID8
ENSMUST00000055241	-	9085	XM_006499042	ENSMUSP00000055602	1888 (aa)	XP_006499105	R4GML0
ENSMUST00000141874	-	4375	-	-	- (aa)	-	-
ENSMUST00000135625	-	641	-	ENSMUSP00000126939	151 (aa)	-	E9PVH6
ENSMUST00000139942	-	467	-	-	- (aa)	-	-
ENSMUST00000171215	-	6391	-	ENSMUSP00000128995	1865 (aa)	-	E9Q7S1
ENSMUST00000152347	-	794	-	ENSMUSP00000132902	264 (aa)	-	F6UL00
ENSMUST00000163384	-	677	-	ENSMUSP00000128291	163 (aa)	-	F6QFS1
ENSMUST00000149210	-	460	-	-	- (aa)	-	-
ENSMUST00000130303	-	458	-	-	- (aa)	-	-
ENSMUST00000147353	-	691	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000027288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027288's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027288	Zfp106	100	97.436	ENSG00000103994	ZNF106	100	97.436	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001515	opioid peptide activity	9507006.	IPI	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	9507006.	IDA	Component
GO:0008286	insulin receptor signaling pathway	21873635.	IBA	Process
GO:0008286	insulin receptor signaling pathway	9507006.	IDA	Process
GO:0016020	membrane	21873635.	IBA	Component
GO:0016020	membrane	9507006.	IDA	Component
GO:0017124	SH3 domain binding	21873635.	IBA	Function
GO:0017124	SH3 domain binding	9507006.	IDA	Function
GO:0046872	metal ion binding	-	IEA	Function