EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027430 (Gene tree)
Gene ID: 66044
Gene Symbol: Dtd1
Alias: 0610006H08Rik|Hars2
Full Name: D-tyrosyl-tRNA deacylase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 168862
Position: chr2: 144599897-144768758
Accession: 1913294
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000028917	-	1350	-	ENSMUSP00000028917	209 (aa)	-	Q9DD18
ENSMUST00000145814	-	788	-	-	- (aa)	-	-
ENSMUST00000125683	-	754	-	-	- (aa)	-	-
ENSMUST00000137406	-	601	-	-	- (aa)	-	-
ENSMUST00000145602	-	408	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000027430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027430's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027430	Dtd1	100	95.215	ENSG00000125821	DTD1	100	95.215	Homo_sapiens
ENSMUSG00000027430	Dtd1	70	46.622	YDL219W	DTD1	99	46.622	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0002161	aminoacyl-tRNA editing activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006260	DNA replication	-	IEA	Process
GO:0006399	tRNA metabolic process	21873635.	IBA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0051499	D-aminoacyl-tRNA deacylase activity	-	IEA	Function
GO:0051500	D-tyrosyl-tRNA(Tyr) deacylase activity	21873635.	IBA	Function