EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027439 (Gene tree)
Gene ID: 74533
Gene Symbol: Gzf1
Alias: 8430437G08Rik|Zfp336
Full Name: GDNF-inducible zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 11927 bases
Position: chr2:148681023-148692949
Accession: 1921783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000028928	zf-C2H2	PF00096.26	4e-34	1	6
ENSMUSP00000028928	zf-C2H2	PF00096.26	4e-34	2	6
ENSMUSP00000028928	zf-C2H2	PF00096.26	4e-34	3	6
ENSMUSP00000028928	zf-C2H2	PF00096.26	4e-34	4	6
ENSMUSP00000028928	zf-C2H2	PF00096.26	4e-34	5	6
ENSMUSP00000028928	zf-C2H2	PF00096.26	4e-34	6	6
ENSMUSP00000028928	zf-met	PF12874.7	7.8e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000131292	-	701	-	ENSMUSP00000121799	146 (aa)	-	A2ASL5
ENSMUST00000151362	-	734	-	-	- (aa)	-	-
ENSMUST00000028928	-	4232	XM_006500304	ENSMUSP00000028928	706 (aa)	XP_006500367	Q4VBD9

Gene Model

Click here to download ENSMUSG00000027439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000027439	Gzf1	83	39.568	ENSMUSG00000006215	Zbtb17	78	39.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027439	Gzf1	100	82.022	ENSG00000125812	GZF1	100	87.500	Homo_sapiens
ENSMUSG00000027439	Gzf1	85	49.507	ENSAPOG00000012930	GZF1	94	49.507	Acanthochromis_polyacanthus
ENSMUSG00000027439	Gzf1	100	75.000	ENSAMEG00000009853	GZF1	100	75.000	Ailuropoda_melanoleuca
ENSMUSG00000027439	Gzf1	89	46.429	ENSACIG00000004753	-	76	46.429	Amphilophus_citrinellus
ENSMUSG00000027439	Gzf1	84	49.333	ENSAOCG00000024275	GZF1	93	49.236	Amphiprion_ocellaris
ENSMUSG00000027439	Gzf1	97	42.818	ENSAPEG00000017195	GZF1	85	42.954	Amphiprion_percula
ENSMUSG00000027439	Gzf1	100	39.704	ENSATEG00000018374	GZF1	88	77.596	Anabas_testudineus
ENSMUSG00000027439	Gzf1	100	80.309	ENSANAG00000028240	GZF1	100	80.591	Aotus_nancymaae
ENSMUSG00000027439	Gzf1	99	41.482	ENSACLG00000025866	GZF1	76	46.280	Astatotilapia_calliptera
ENSMUSG00000027439	Gzf1	87	47.161	ENSAMXG00000017178	GZF1	81	47.326	Astyanax_mexicanus
ENSMUSG00000027439	Gzf1	100	80.169	ENSCJAG00000000733	GZF1	100	80.309	Callithrix_jacchus
ENSMUSG00000027439	Gzf1	100	78.561	ENSCAFG00000005142	GZF1	100	78.561	Canis_familiaris
ENSMUSG00000027439	Gzf1	56	82.273	ENSCAFG00020027463	-	100	82.273	Canis_lupus_dingo
ENSMUSG00000027439	Gzf1	100	76.783	ENSTSYG00000028054	GZF1	100	75.312	Carlito_syrichta
ENSMUSG00000027439	Gzf1	100	74.860	ENSCAPG00000002173	GZF1	100	74.721	Cavia_aperea
ENSMUSG00000027439	Gzf1	100	74.721	ENSCPOG00000010790	GZF1	100	74.581	Cavia_porcellus
ENSMUSG00000027439	Gzf1	100	80.028	ENSCCAG00000035601	GZF1	100	80.169	Cebus_capucinus
ENSMUSG00000027439	Gzf1	100	81.627	ENSCATG00000039279	GZF1	100	81.627	Cercocebus_atys
ENSMUSG00000027439	Gzf1	100	74.454	ENSCLAG00000014714	GZF1	100	73.770	Chinchilla_lanigera
ENSMUSG00000027439	Gzf1	100	81.601	ENSCSAG00000011054	GZF1	100	81.601	Chlorocebus_sabaeus
ENSMUSG00000027439	Gzf1	90	55.034	ENSCPBG00000023418	-	66	55.517	Chrysemys_picta_bellii
ENSMUSG00000027439	Gzf1	100	72.486	ENSCPBG00000023415	GZF1	100	72.207	Chrysemys_picta_bellii
ENSMUSG00000027439	Gzf1	100	81.575	ENSCANG00000041260	GZF1	100	81.575	Colobus_angolensis_palliatus
ENSMUSG00000027439	Gzf1	100	88.385	ENSCGRG00001003944	Gzf1	100	88.102	Cricetulus_griseus_chok1gshd
ENSMUSG00000027439	Gzf1	100	88.385	ENSCGRG00000012721	Gzf1	100	88.102	Cricetulus_griseus_crigri
ENSMUSG00000027439	Gzf1	80	77.178	ENSDNOG00000014290	GZF1	100	77.352	Dasypus_novemcinctus
ENSMUSG00000027439	Gzf1	100	81.907	ENSDORG00000011855	Gzf1	100	82.048	Dipodomys_ordii
ENSMUSG00000027439	Gzf1	64	75.093	ENSEBUG00000004858	GZF1	58	75.093	Eptatretus_burgeri
ENSMUSG00000027439	Gzf1	56	86.818	ENSECAG00000040045	-	100	86.818	Equus_caballus
ENSMUSG00000027439	Gzf1	83	47.455	ENSELUG00000013581	GZF1	86	48.333	Esox_lucius
ENSMUSG00000027439	Gzf1	100	79.161	ENSFCAG00000006484	GZF1	100	79.161	Felis_catus
ENSMUSG00000027439	Gzf1	93	76.029	ENSFDAG00000019468	GZF1	96	75.441	Fukomys_damarensis
ENSMUSG00000027439	Gzf1	89	45.783	ENSFHEG00000020498	GZF1	76	46.190	Fundulus_heteroclitus
ENSMUSG00000027439	Gzf1	87	47.826	ENSGMOG00000011017	GZF1	100	47.987	Gadus_morhua
ENSMUSG00000027439	Gzf1	100	73.184	ENSGALG00000053640	GZF1	100	72.905	Gallus_gallus
ENSMUSG00000027439	Gzf1	89	46.677	ENSGAFG00000008725	GZF1	73	46.311	Gambusia_affinis
ENSMUSG00000027439	Gzf1	86	47.847	ENSGACG00000012415	GZF1	99	70.408	Gasterosteus_aculeatus
ENSMUSG00000027439	Gzf1	100	81.907	ENSGGOG00000023248	GZF1	100	81.882	Gorilla_gorilla
ENSMUSG00000027439	Gzf1	99	42.536	ENSHBUG00000016502	-	88	42.373	Haplochromis_burtoni
ENSMUSG00000027439	Gzf1	100	74.457	ENSHGLG00000008891	GZF1	100	74.488	Heterocephalus_glaber_female
ENSMUSG00000027439	Gzf1	100	74.457	ENSHGLG00100015117	GZF1	100	74.488	Heterocephalus_glaber_male
ENSMUSG00000027439	Gzf1	100	82.188	ENSSTOG00000009820	GZF1	100	82.188	Ictidomys_tridecemlineatus
ENSMUSG00000027439	Gzf1	100	84.248	ENSJJAG00000008172	Gzf1	100	84.196	Jaculus_jaculus
ENSMUSG00000027439	Gzf1	50	71.579	ENSKMAG00000001453	-	59	71.579	Kryptolebias_marmoratus
ENSMUSG00000027439	Gzf1	86	48.718	ENSLBEG00000025803	-	81	45.493	Labrus_bergylta
ENSMUSG00000027439	Gzf1	100	81.523	ENSLAFG00000002458	GZF1	100	81.523	Loxodonta_africana
ENSMUSG00000027439	Gzf1	100	81.627	ENSMFAG00000042408	GZF1	100	81.627	Macaca_fascicularis
ENSMUSG00000027439	Gzf1	100	81.627	ENSMMUG00000022387	GZF1	100	81.627	Macaca_mulatta
ENSMUSG00000027439	Gzf1	100	81.742	ENSMNEG00000033117	GZF1	100	81.742	Macaca_nemestrina
ENSMUSG00000027439	Gzf1	100	81.742	ENSMLEG00000036831	GZF1	100	81.742	Mandrillus_leucophaeus
ENSMUSG00000027439	Gzf1	99	44.414	ENSMAMG00000011931	-	87	44.507	Mastacembelus_armatus
ENSMUSG00000027439	Gzf1	99	41.940	ENSMZEG00005010711	-	88	41.915	Maylandia_zebra
ENSMUSG00000027439	Gzf1	85	90.556	ENSMAUG00000019656	Gzf1	100	90.894	Mesocricetus_auratus
ENSMUSG00000027439	Gzf1	100	82.138	ENSMICG00000046070	GZF1	100	82.419	Microcebus_murinus
ENSMUSG00000027439	Gzf1	100	88.119	ENSMOCG00000017816	Gzf1	100	87.977	Microtus_ochrogaster
ENSMUSG00000027439	Gzf1	87	48.936	ENSMMOG00000004395	-	75	48.613	Mola_mola
ENSMUSG00000027439	Gzf1	100	74.441	ENSMODG00000006238	GZF1	100	80.769	Monodelphis_domestica
ENSMUSG00000027439	Gzf1	100	97.599	MGP_CAROLIEiJ_G0024409	Gzf1	100	97.599	Mus_caroli
ENSMUSG00000027439	Gzf1	100	97.878	MGP_PahariEiJ_G0025852	Gzf1	100	97.878	Mus_pahari
ENSMUSG00000027439	Gzf1	100	99.292	MGP_SPRETEiJ_G0025327	Gzf1	100	99.292	Mus_spretus
ENSMUSG00000027439	Gzf1	100	78.631	ENSMPUG00000001160	GZF1	89	78.322	Mustela_putorius_furo
ENSMUSG00000027439	Gzf1	98	77.429	ENSMLUG00000002194	GZF1	100	77.286	Myotis_lucifugus
ENSMUSG00000027439	Gzf1	100	86.601	ENSNGAG00000024012	Gzf1	100	86.319	Nannospalax_galili
ENSMUSG00000027439	Gzf1	85	42.679	ENSNBRG00000019987	GZF1	98	44.951	Neolamprologus_brichardi
ENSMUSG00000027439	Gzf1	100	81.294	ENSNLEG00000011565	GZF1	100	81.294	Nomascus_leucogenys
ENSMUSG00000027439	Gzf1	100	74.550	ENSOPRG00000004697	GZF1	100	75.724	Ochotona_princeps
ENSMUSG00000027439	Gzf1	100	71.791	ENSODEG00000013020	GZF1	100	72.214	Octodon_degus
ENSMUSG00000027439	Gzf1	87	48.460	ENSONIG00000000989	GZF1	100	48.460	Oreochromis_niloticus
ENSMUSG00000027439	Gzf1	100	79.014	ENSOCUG00000025214	GZF1	100	78.873	Oryctolagus_cuniculus
ENSMUSG00000027439	Gzf1	89	46.401	ENSORLG00000010006	-	76	44.817	Oryzias_latipes
ENSMUSG00000027439	Gzf1	100	80.423	ENSOGAG00000028389	GZF1	100	80.704	Otolemur_garnettii
ENSMUSG00000027439	Gzf1	100	81.857	ENSPPAG00000028487	GZF1	100	81.690	Pan_paniscus
ENSMUSG00000027439	Gzf1	100	79.161	ENSPPRG00000010040	GZF1	100	79.161	Panthera_pardus
ENSMUSG00000027439	Gzf1	100	79.301	ENSPTIG00000019328	GZF1	100	79.301	Panthera_tigris_altaica
ENSMUSG00000027439	Gzf1	100	81.601	ENSPTRG00000013320	GZF1	100	81.575	Pan_troglodytes
ENSMUSG00000027439	Gzf1	100	81.601	ENSPANG00000017419	GZF1	100	81.601	Papio_anubis
ENSMUSG00000027439	Gzf1	89	50.230	ENSPKIG00000003781	GZF1	79	49.538	Paramormyrops_kingsleyae
ENSMUSG00000027439	Gzf1	100	72.433	ENSPSIG00000014455	GZF1	100	72.486	Pelodiscus_sinensis
ENSMUSG00000027439	Gzf1	61	53.409	ENSPMGG00000003778	-	66	54.733	Periophthalmus_magnuspinnatus
ENSMUSG00000027439	Gzf1	100	90.227	ENSPEMG00000011285	Gzf1	100	90.227	Peromyscus_maniculatus_bairdii
ENSMUSG00000027439	Gzf1	100	74.860	ENSPCIG00000013803	GZF1	100	74.441	Phascolarctos_cinereus
ENSMUSG00000027439	Gzf1	87	48.529	ENSPFOG00000002393	GZF1	100	47.549	Poecilia_formosa
ENSMUSG00000027439	Gzf1	87	46.338	ENSPLAG00000005232	GZF1	93	46.338	Poecilia_latipinna
ENSMUSG00000027439	Gzf1	88	41.206	ENSPMEG00000020017	-	70	41.206	Poecilia_mexicana
ENSMUSG00000027439	Gzf1	89	31.464	ENSPREG00000016398	GZF1	72	42.698	Poecilia_reticulata
ENSMUSG00000027439	Gzf1	100	80.519	ENSPPYG00000010766	GZF1	72	81.858	Pongo_abelii
ENSMUSG00000027439	Gzf1	82	82.504	ENSPCAG00000007544	GZF1	100	81.818	Procavia_capensis
ENSMUSG00000027439	Gzf1	100	82.394	ENSPCOG00000024180	GZF1	100	82.676	Propithecus_coquereli
ENSMUSG00000027439	Gzf1	100	79.972	ENSPVAG00000014056	GZF1	100	79.972	Pteropus_vampyrus
ENSMUSG00000027439	Gzf1	55	45.418	ENSPNYG00000000788	-	63	45.418	Pundamilia_nyererei
ENSMUSG00000027439	Gzf1	100	97.030	ENSRNOG00000004735	Gzf1	100	97.030	Rattus_norvegicus
ENSMUSG00000027439	Gzf1	100	81.678	ENSRBIG00000028715	GZF1	100	81.678	Rhinopithecus_bieti
ENSMUSG00000027439	Gzf1	100	81.907	ENSRROG00000030533	GZF1	100	81.907	Rhinopithecus_roxellana
ENSMUSG00000027439	Gzf1	100	79.859	ENSSBOG00000018893	GZF1	100	80.000	Saimiri_boliviensis_boliviensis
ENSMUSG00000027439	Gzf1	100	74.225	ENSSHAG00000009367	GZF1	100	74.126	Sarcophilus_harrisii
ENSMUSG00000027439	Gzf1	97	46.694	ENSSFOG00015008631	gzf1	81	46.207	Scleropages_formosus
ENSMUSG00000027439	Gzf1	96	45.049	ENSSDUG00000008186	GZF1	81	44.708	Seriola_dumerili
ENSMUSG00000027439	Gzf1	96	45.455	ENSSLDG00000002382	GZF1	81	44.993	Seriola_lalandi_dorsalis
ENSMUSG00000027439	Gzf1	81	86.089	ENSSARG00000010285	GZF1	79	86.089	Sorex_araneus
ENSMUSG00000027439	Gzf1	99	64.228	ENSSPUG00000004147	GZF1	100	67.125	Sphenodon_punctatus
ENSMUSG00000027439	Gzf1	85	45.971	ENSSPAG00000011759	GZF1	75	46.239	Stegastes_partitus
ENSMUSG00000027439	Gzf1	85	74.551	ENSSSCG00000007117	GZF1	100	74.062	Sus_scrofa
ENSMUSG00000027439	Gzf1	87	45.586	ENSTNIG00000010722	GZF1	100	45.323	Tetraodon_nigroviridis
ENSMUSG00000027439	Gzf1	100	75.522	ENSTTRG00000011345	GZF1	100	75.382	Tursiops_truncatus
ENSMUSG00000027439	Gzf1	56	82.727	ENSUAMG00000021858	-	100	82.727	Ursus_americanus
ENSMUSG00000027439	Gzf1	100	78.352	ENSUMAG00000004065	GZF1	100	78.182	Ursus_maritimus
ENSMUSG00000027439	Gzf1	100	78.702	ENSVVUG00000012086	GZF1	100	78.702	Vulpes_vulpes
ENSMUSG00000027439	Gzf1	99	59.007	ENSXETG00000004510	gzf1	99	59.007	Xenopus_tropicalis
ENSMUSG00000027439	Gzf1	88	46.967	ENSXMAG00000023249	GZF1	74	46.262	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	14522971.	IDA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0000980	RNA polymerase II distal enhancer sequence-specific DNA binding	-	ISO	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISO	Function
GO:0001658	branching involved in ureteric bud morphogenesis	14522971.	IMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	14522971.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0043565	sequence-specific DNA binding	21873635.	IBA	Function
GO:0043565	sequence-specific DNA binding	-	ISO	Function
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045892	negative regulation of transcription, DNA-templated	-	ISO	Process
GO:0045893	positive regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function