EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000136407	-	380	-	-	- (aa)	-	-
ENSMUST00000143740	-	358	-	-	- (aa)	-	-
ENSMUST00000178997	-	4161	-	ENSMUSP00000136457	745 (aa)	-	A2APB8
ENSMUST00000109816	-	3483	XM_006500213	ENSMUSP00000105441	745 (aa)	XP_006500276	A2APB8
ENSMUST00000028969	-	3654	XM_006500214	ENSMUSP00000028969	745 (aa)	XP_006500277	A2APB8
ENSMUST00000144848	-	733	-	-	- (aa)	-	-
ENSMUST00000164120	-	4365	-	ENSMUSP00000128888	745 (aa)	-	A2APB8

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027469	Tpx2	100	78.667	ENSG00000088325	TPX2	99	78.800	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000922	spindle pole	-	ISO	Component
GO:0005515	protein binding	19668197.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005815	microtubule organizing center	-	ISO	Component
GO:0005818	aster	-	ISO	Component
GO:0005819	spindle	18663142.	IDA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005874	microtubule	-	IEA	Component
GO:0005876	spindle microtubule	-	ISO	Component
GO:0006915	apoptotic process	-	IEA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0015630	microtubule cytoskeleton	-	ISO	Component
GO:0019901	protein kinase binding	18663142.	IPI	Function
GO:0019901	protein kinase binding	-	ISO	Function
GO:0032147	activation of protein kinase activity	-	ISO	Process
GO:0043203	axon hillock	19668197.	IDA	Component
GO:0045171	intercellular bridge	-	ISO	Component
GO:0051225	spindle assembly	-	ISO	Process
GO:0051301	cell division	-	IEA	Process
GO:0060236	regulation of mitotic spindle organization	18663142.	IMP	Process
GO:0061676	importin-alpha family protein binding	26165940.	IDA	Function
GO:0061676	importin-alpha family protein binding	-	ISO	Function
GO:0072686	mitotic spindle	-	ISO	Component
GO:0090307	mitotic spindle assembly	26165940.	IMP	Process
GO:0090307	mitotic spindle assembly	-	ISO	Process