EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027498 (Gene tree)
Gene ID: 67337
Gene Symbol: Cstf1
Alias: 1700057K18Rik
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 11768
Position: chr2: 172370681-172382448
Accession: 1914587
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000151511	-	674	-	ENSMUSP00000121178	155 (aa)	-	A2APA3
ENSMUST00000116375	-	3451	XM_006500072	ENSMUSP00000112076	431 (aa)	XP_006500135	Q99LC2

Gene Model

Click here to download ENSMUSG00000027498's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027498's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027498	Cstf1	100	100.000	ENSG00000101138	CSTF1	100	100.000	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005848	mRNA cleavage stimulating factor complex	21873635.	IBA	Component
GO:0006397	mRNA processing	-	IEA	Process