EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027649 (Gene tree)
Gene ID: 66642
Gene Symbol: Ctnnbl1
Alias: 5730471K09Rik|FLJ21108|NYD-SP19|P14L
Full Name: catenin%2C beta like 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 154214
Position: chr2: 157737401-157891614
Accession: 1913892
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000129842	-	374	-	-	- (aa)	-	-
ENSMUST00000156300	-	801	-	-	- (aa)	-	-
ENSMUST00000155479	-	344	-	-	- (aa)	-	-
ENSMUST00000029178	-	2442	XM_006500022	ENSMUSP00000029178	563 (aa)	XP_006500085	Q9CWL8

Gene Model

Click here to download ENSMUSG00000027649's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027649's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027649	Ctnnbl1	100	96.092	ENSG00000132792	CTNNBL1	100	97.106	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000974	Prp19 complex	-	ISO	Component
GO:0005515	protein binding	9488439.	IPI	Function
GO:0005634	nucleus	12659813.	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0005681	spliceosomal complex	-	ISO	Component
GO:0006915	apoptotic process	12659813.	ISO	Process
GO:0016445	somatic diversification of immunoglobulins	-	ISO	Process
GO:0019899	enzyme binding	-	ISO	Function
GO:0043065	positive regulation of apoptotic process	-	ISO	Process