EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027706 (Gene tree)
Gene ID: 69276
Gene Symbol: Sec62
Alias: 3100002M17Rik|Dtrp1|HTP1|SEC62|Tloc1
Full Name: SEC62 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 28389
Position: chr3: 30792875-30821263
Accession: 1916526
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000191730	-	639	-	-	- (aa)	-	-
ENSMUST00000029256	-	3967	XM_006535534	ENSMUSP00000029256	398 (aa)	-	Q8BU14
ENSMUST00000195072	-	558	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000027706's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03060	Protein export	KEGG
mmu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027706's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027706	Sec62	100	92.481	ENSG00000008952	SEC62	99	97.619	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0006620	posttranslational protein targeting to endoplasmic reticulum membrane	22375059.	ISO	Process
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0015031	protein transport	-	IEA	Process
GO:0016020	membrane	21873635.	IBA	Component
GO:0016020	membrane	22375059.	ISO	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0030176	integral component of endoplasmic reticulum membrane	-	IEA	Component
GO:0031204	posttranslational protein targeting to membrane, translocation	21873635.	IBA	Process
GO:0031204	posttranslational protein targeting to membrane, translocation	-	ISO	Process