EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027709 (Gene tree)
Gene ID: 72039
Gene Symbol: Mccc1
Alias: 1810045E08Rik|2310058B18Rik|MCCA|MCCalpha
Full Name: methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 41367 bases
Position: chr3:35959312-36000678
Accession: 1919289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000029259	RimK	PF08443.11	0.00015	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000199113	-	2934	-	ENSMUSP00000143266	255 (aa)	-	A0A0G2JFQ5
ENSMUST00000200162	-	757	-	ENSMUSP00000143396	84 (aa)	-	A0A0G2JG24
ENSMUST00000200163	-	802	-	ENSMUSP00000143039	201 (aa)	-	A0A0G2JF64
ENSMUST00000198515	-	2114	-	-	- (aa)	-	-
ENSMUST00000200552	-	468	-	-	- (aa)	-	-
ENSMUST00000199092	-	6751	-	-	- (aa)	-	-
ENSMUST00000197580	-	821	-	-	- (aa)	-	-
ENSMUST00000029259	-	2455	-	ENSMUSP00000029259	717 (aa)	-	Q99MR8

Gene Model

Click here to download ENSMUSG00000027709's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00280	Valine, leucine and isoleucine degradation	KEGG
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000027709	Mccc1	93	40.228	ENSMUSG00000041650	Pcca	92	40.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027709	Mccc1	99	84.637	ENSG00000078070	MCCC1	98	91.765	Homo_sapiens
ENSMUSG00000027709	Mccc1	99	82.542	ENSAMEG00000015967	MCCC1	98	83.027	Ailuropoda_melanoleuca
ENSMUSG00000027709	Mccc1	76	69.526	ENSACIG00000023146	mccc1	93	81.840	Amphilophus_citrinellus
ENSMUSG00000027709	Mccc1	96	76.547	ENSAPLG00000008989	MCCC1	97	76.547	Anas_platyrhynchos
ENSMUSG00000027709	Mccc1	99	83.876	ENSANAG00000028235	MCCC1	98	90.353	Aotus_nancymaae
ENSMUSG00000027709	Mccc1	95	71.366	ENSACLG00000026110	mccc1	98	73.621	Astatotilapia_calliptera
ENSMUSG00000027709	Mccc1	92	74.510	ENSAMXG00000001531	mccc1	94	74.701	Astyanax_mexicanus
ENSMUSG00000027709	Mccc1	99	84.174	ENSBTAG00000006548	MCCC1	98	84.583	Bos_taurus
ENSMUSG00000027709	Mccc1	99	80.622	ENSCJAG00000005103	MCCC1	98	90.824	Callithrix_jacchus
ENSMUSG00000027709	Mccc1	99	83.876	ENSCAFG00000011749	MCCC1	98	83.876	Canis_familiaris
ENSMUSG00000027709	Mccc1	99	83.876	ENSCAFG00020001000	MCCC1	98	83.876	Canis_lupus_dingo
ENSMUSG00000027709	Mccc1	99	83.799	ENSCHIG00000025794	MCCC1	99	83.880	Capra_hircus
ENSMUSG00000027709	Mccc1	99	84.777	ENSTSYG00000012606	MCCC1	97	93.128	Carlito_syrichta
ENSMUSG00000027709	Mccc1	94	80.966	ENSCAPG00000012269	MCCC1	98	80.966	Cavia_aperea
ENSMUSG00000027709	Mccc1	99	80.447	ENSCPOG00000010866	MCCC1	98	80.905	Cavia_porcellus
ENSMUSG00000027709	Mccc1	99	85.615	ENSCATG00000037699	MCCC1	98	92.471	Cercocebus_atys
ENSMUSG00000027709	Mccc1	82	81.664	ENSCLAG00000014174	MCCC1	99	81.849	Chinchilla_lanigera
ENSMUSG00000027709	Mccc1	99	86.173	ENSCSAG00000013226	MCCC1	98	86.704	Chlorocebus_sabaeus
ENSMUSG00000027709	Mccc1	99	75.524	ENSCPBG00000000534	MCCC1	98	76.538	Chrysemys_picta_bellii
ENSMUSG00000027709	Mccc1	93	58.174	ENSCING00000019260	-	92	58.174	Ciona_intestinalis
ENSMUSG00000027709	Mccc1	93	57.687	ENSCING00000020099	-	99	57.687	Ciona_intestinalis
ENSMUSG00000027709	Mccc1	93	56.214	ENSCSAVG00000007062	-	99	54.318	Ciona_savignyi
ENSMUSG00000027709	Mccc1	85	86.928	ENSCANG00000037917	MCCC1	98	93.548	Colobus_angolensis_palliatus
ENSMUSG00000027709	Mccc1	97	92.837	ENSCGRG00001012469	Mccc1	98	92.908	Cricetulus_griseus_chok1gshd
ENSMUSG00000027709	Mccc1	97	92.120	ENSCGRG00000002616	Mccc1	98	92.199	Cricetulus_griseus_crigri
ENSMUSG00000027709	Mccc1	95	72.328	ENSCSEG00000019501	mccc1	95	72.409	Cynoglossus_semilaevis
ENSMUSG00000027709	Mccc1	95	73.167	ENSDARG00000102538	mccc1	96	73.285	Danio_rerio
ENSMUSG00000027709	Mccc1	100	83.149	ENSDNOG00000012070	MCCC1	98	83.803	Dasypus_novemcinctus
ENSMUSG00000027709	Mccc1	100	82.802	ENSDORG00000000473	Mccc1	98	85.251	Dipodomys_ordii
ENSMUSG00000027709	Mccc1	99	76.955	ENSETEG00000008384	MCCC1	98	77.119	Echinops_telfairi
ENSMUSG00000027709	Mccc1	53	77.807	ENSEBUG00000016250	-	90	77.807	Eptatretus_burgeri
ENSMUSG00000027709	Mccc1	100	82.410	ENSEASG00005015339	MCCC1	99	93.473	Equus_asinus_asinus
ENSMUSG00000027709	Mccc1	99	83.520	ENSECAG00000008214	MCCC1	97	84.136	Equus_caballus
ENSMUSG00000027709	Mccc1	87	73.430	ENSEEUG00000011233	MCCC1	91	73.492	Erinaceus_europaeus
ENSMUSG00000027709	Mccc1	94	72.000	ENSELUG00000010299	mccc1	99	73.512	Esox_lucius
ENSMUSG00000027709	Mccc1	85	85.294	ENSFCAG00000000940	MCCC1	97	93.365	Felis_catus
ENSMUSG00000027709	Mccc1	96	77.890	ENSFALG00000008252	MCCC1	97	77.890	Ficedula_albicollis
ENSMUSG00000027709	Mccc1	99	77.086	ENSFDAG00000009183	MCCC1	98	77.479	Fukomys_damarensis
ENSMUSG00000027709	Mccc1	95	70.029	ENSGMOG00000008521	mccc1	98	70.029	Gadus_morhua
ENSMUSG00000027709	Mccc1	99	75.838	ENSGALG00000008785	MCCC1	92	77.410	Gallus_gallus
ENSMUSG00000027709	Mccc1	95	72.035	ENSGAFG00000010643	mccc1	97	72.134	Gambusia_affinis
ENSMUSG00000027709	Mccc1	91	78.593	ENSGAGG00000000770	MCCC1	99	78.593	Gopherus_agassizii
ENSMUSG00000027709	Mccc1	99	85.335	ENSGGOG00000002784	MCCC1	98	92.706	Gorilla_gorilla
ENSMUSG00000027709	Mccc1	95	71.366	ENSHBUG00000000956	mccc1	96	71.408	Haplochromis_burtoni
ENSMUSG00000027709	Mccc1	99	83.380	ENSHGLG00000014650	MCCC1	98	83.876	Heterocephalus_glaber_female
ENSMUSG00000027709	Mccc1	99	83.380	ENSHGLG00100015295	MCCC1	98	83.876	Heterocephalus_glaber_male
ENSMUSG00000027709	Mccc1	93	72.823	ENSHCOG00000010503	mccc1	98	72.876	Hippocampus_comes
ENSMUSG00000027709	Mccc1	99	72.034	ENSIPUG00000024615	mccc1	99	72.301	Ictalurus_punctatus
ENSMUSG00000027709	Mccc1	99	86.280	ENSSTOG00000010361	MCCC1	98	86.280	Ictidomys_tridecemlineatus
ENSMUSG00000027709	Mccc1	98	82.361	ENSJJAG00000003543	Mccc1	98	82.361	Jaculus_jaculus
ENSMUSG00000027709	Mccc1	92	73.454	ENSLBEG00000001741	mccc1	91	73.472	Labrus_bergylta
ENSMUSG00000027709	Mccc1	96	76.274	ENSLACG00000018119	MCCC1	96	76.274	Latimeria_chalumnae
ENSMUSG00000027709	Mccc1	96	67.049	ENSLOCG00000000778	mccc1	96	67.049	Lepisosteus_oculatus
ENSMUSG00000027709	Mccc1	99	81.425	ENSLAFG00000018018	MCCC1	99	81.754	Loxodonta_africana
ENSMUSG00000027709	Mccc1	99	86.034	ENSMFAG00000000043	MCCC1	98	92.941	Macaca_fascicularis
ENSMUSG00000027709	Mccc1	85	87.582	ENSMMUG00000010553	MCCC1	98	92.941	Macaca_mulatta
ENSMUSG00000027709	Mccc1	99	82.123	ENSMNEG00000017163	MCCC1	99	87.418	Macaca_nemestrina
ENSMUSG00000027709	Mccc1	99	82.402	ENSMLEG00000039351	MCCC1	98	92.471	Mandrillus_leucophaeus
ENSMUSG00000027709	Mccc1	95	71.366	ENSMZEG00005015532	mccc1	96	71.408	Maylandia_zebra
ENSMUSG00000027709	Mccc1	96	78.035	ENSMGAG00000009494	MCCC1	99	78.035	Meleagris_gallopavo
ENSMUSG00000027709	Mccc1	99	84.218	ENSMICG00000048884	MCCC1	98	90.376	Microcebus_murinus
ENSMUSG00000027709	Mccc1	98	90.085	ENSMOCG00000003671	Mccc1	99	90.099	Microtus_ochrogaster
ENSMUSG00000027709	Mccc1	99	80.112	ENSMODG00000021288	MCCC1	95	81.241	Monodelphis_domestica
ENSMUSG00000027709	Mccc1	100	99.303	MGP_CAROLIEiJ_G0024932	Mccc1	100	99.303	Mus_caroli
ENSMUSG00000027709	Mccc1	100	99.721	MGP_SPRETEiJ_G0025866	Mccc1	100	99.721	Mus_spretus
ENSMUSG00000027709	Mccc1	97	83.671	ENSMPUG00000002371	MCCC1	87	83.671	Mustela_putorius_furo
ENSMUSG00000027709	Mccc1	99	83.077	ENSMLUG00000012257	MCCC1	97	84.023	Myotis_lucifugus
ENSMUSG00000027709	Mccc1	97	87.948	ENSNGAG00000001216	Mccc1	99	87.429	Nannospalax_galili
ENSMUSG00000027709	Mccc1	99	82.845	ENSNLEG00000005989	MCCC1	98	92.471	Nomascus_leucogenys
ENSMUSG00000027709	Mccc1	99	78.249	ENSOPRG00000007258	MCCC1	98	78.249	Ochotona_princeps
ENSMUSG00000027709	Mccc1	99	81.425	ENSODEG00000012286	MCCC1	98	81.895	Octodon_degus
ENSMUSG00000027709	Mccc1	95	71.659	ENSONIG00000008395	mccc1	96	71.698	Oreochromis_niloticus
ENSMUSG00000027709	Mccc1	92	80.822	ENSOANG00000011253	MCCC1	99	80.822	Ornithorhynchus_anatinus
ENSMUSG00000027709	Mccc1	99	78.631	ENSOCUG00000012393	MCCC1	98	79.066	Oryctolagus_cuniculus
ENSMUSG00000027709	Mccc1	96	71.304	ENSORLG00000011678	mccc1	99	71.594	Oryzias_latipes
ENSMUSG00000027709	Mccc1	96	71.304	ENSORLG00020005680	mccc1	98	71.594	Oryzias_latipes_hni
ENSMUSG00000027709	Mccc1	93	73.343	ENSORLG00015003526	mccc1	96	73.105	Oryzias_latipes_hsok
ENSMUSG00000027709	Mccc1	96	71.076	ENSOMEG00000011470	mccc1	97	71.182	Oryzias_melastigma
ENSMUSG00000027709	Mccc1	91	83.767	ENSOGAG00000000659	MCCC1	99	83.767	Otolemur_garnettii
ENSMUSG00000027709	Mccc1	97	85.260	ENSOARG00000020660	MCCC1	99	85.260	Ovis_aries
ENSMUSG00000027709	Mccc1	99	84.637	ENSPPAG00000036167	MCCC1	98	91.765	Pan_paniscus
ENSMUSG00000027709	Mccc1	85	84.804	ENSPPRG00000000127	MCCC1	97	92.891	Panthera_pardus
ENSMUSG00000027709	Mccc1	99	83.240	ENSPTIG00000018514	MCCC1	97	92.180	Panthera_tigris_altaica
ENSMUSG00000027709	Mccc1	99	84.637	ENSPTRG00000015662	MCCC1	98	92.000	Pan_troglodytes
ENSMUSG00000027709	Mccc1	99	86.173	ENSPANG00000006870	MCCC1	98	92.941	Papio_anubis
ENSMUSG00000027709	Mccc1	96	76.522	ENSPSIG00000017510	MCCC1	99	77.523	Pelodiscus_sinensis
ENSMUSG00000027709	Mccc1	92	68.684	ENSPMGG00000000155	mccc1	96	68.507	Periophthalmus_magnuspinnatus
ENSMUSG00000027709	Mccc1	99	92.847	ENSPEMG00000014164	Mccc1	98	93.040	Peromyscus_maniculatus_bairdii
ENSMUSG00000027709	Mccc1	99	79.132	ENSPCIG00000013027	MCCC1	83	79.349	Phascolarctos_cinereus
ENSMUSG00000027709	Mccc1	95	72.459	ENSPFOG00000019171	mccc1	96	72.384	Poecilia_formosa
ENSMUSG00000027709	Mccc1	95	72.312	ENSPLAG00000022735	mccc1	96	72.238	Poecilia_latipinna
ENSMUSG00000027709	Mccc1	95	72.312	ENSPMEG00000000664	mccc1	96	72.238	Poecilia_mexicana
ENSMUSG00000027709	Mccc1	99	85.615	ENSPPYG00000014331	MCCC1	98	86.139	Pongo_abelii
ENSMUSG00000027709	Mccc1	99	72.843	ENSPCAG00000003195	MCCC1	97	73.011	Procavia_capensis
ENSMUSG00000027709	Mccc1	100	84.743	ENSPCOG00000020095	MCCC1	98	90.610	Propithecus_coquereli
ENSMUSG00000027709	Mccc1	98	80.141	ENSPVAG00000013436	MCCC1	98	80.747	Pteropus_vampyrus
ENSMUSG00000027709	Mccc1	95	67.251	ENSPNAG00000025069	mccc1	97	67.197	Pygocentrus_nattereri
ENSMUSG00000027709	Mccc1	99	95.378	ENSRNOG00000013293	Mccc1	99	95.378	Rattus_norvegicus
ENSMUSG00000027709	Mccc1	99	85.615	ENSRBIG00000038726	MCCC1	98	92.706	Rhinopithecus_bieti
ENSMUSG00000027709	Mccc1	99	85.335	ENSRROG00000041247	MCCC1	98	92.471	Rhinopithecus_roxellana
ENSMUSG00000027709	Mccc1	92	85.997	ENSSBOG00000026219	MCCC1	98	92.308	Saimiri_boliviensis_boliviensis
ENSMUSG00000027709	Mccc1	96	79.942	ENSSHAG00000016104	MCCC1	99	79.942	Sarcophilus_harrisii
ENSMUSG00000027709	Mccc1	98	72.119	ENSSFOG00015007784	mccc1	97	73.555	Scleropages_formosus
ENSMUSG00000027709	Mccc1	98	70.822	ENSSMAG00000019667	mccc1	93	73.991	Scophthalmus_maximus
ENSMUSG00000027709	Mccc1	92	77.778	ENSSPUG00000014366	MCCC1	99	77.778	Sphenodon_punctatus
ENSMUSG00000027709	Mccc1	95	71.576	ENSSPAG00000011206	mccc1	98	70.888	Stegastes_partitus
ENSMUSG00000027709	Mccc1	100	80.474	ENSSSCG00000025942	MCCC1	99	84.471	Sus_scrofa
ENSMUSG00000027709	Mccc1	94	78.667	ENSTGUG00000010506	MCCC1	99	78.667	Taeniopygia_guttata
ENSMUSG00000027709	Mccc1	93	78.657	ENSTBEG00000007988	MCCC1	99	78.657	Tupaia_belangeri
ENSMUSG00000027709	Mccc1	100	84.605	ENSTTRG00000016518	MCCC1	98	85.431	Tursiops_truncatus
ENSMUSG00000027709	Mccc1	64	88.646	ENSUAMG00000008378	MCCC1	98	92.029	Ursus_americanus
ENSMUSG00000027709	Mccc1	99	82.542	ENSUMAG00000006927	MCCC1	98	83.027	Ursus_maritimus
ENSMUSG00000027709	Mccc1	99	83.027	ENSVVUG00000006835	MCCC1	98	83.027	Vulpes_vulpes
ENSMUSG00000027709	Mccc1	97	75.144	ENSXETG00000016826	mccc1	97	75.144	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0002169	3-methylcrotonyl-CoA carboxylase complex, mitochondrial	-	ISO	Component
GO:0004485	methylcrotonoyl-CoA carboxylase activity	-	ISO	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005743	mitochondrial inner membrane	12865426.	HDA	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0016874	ligase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:1905202	methylcrotonoyl-CoA carboxylase complex	-	ISO	Component