EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027804 (Gene tree)
Gene ID: 67738
Gene Symbol: Ppid
Alias: 4930564J03Rik|CYP-40|Ppidl|cyclophilin 40|cytoplasmic cyclophilin D
Full Name: peptidylprolyl isomerase D (cyclophilin D)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 12309
Position: chr3: 79591342-79603650
Accession: 1914988
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000161876	-	546	-	-	- (aa)	-	-
ENSMUST00000162690	-	407	-	-	- (aa)	-	-
ENSMUST00000161460	-	3777	-	-	- (aa)	-	-
ENSMUST00000160799	-	512	-	-	- (aa)	-	-
ENSMUST00000159505	-	353	-	ENSMUSP00000141423	73 (aa)	-	A0A0A6YW70
ENSMUST00000029382	-	1752	XM_006501943	ENSMUSP00000029382	370 (aa)	XP_006502006	Q9CR16

Gene Model

Click here to download ENSMUSG00000027804's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04217	Necroptosis	KEGG
mmu04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027804's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027804	Ppid	96	45.676	YLR216C	CPR6	99	45.676	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000413	protein peptidyl-prolyl isomerization	-	ISO	Process
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	21873635.	IBA	Function
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	-	ISO	Function
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	8812478.	ISS	Function
GO:0005528	FK506 binding	8812478.	TAS	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006457	protein folding	-	IEA	Process
GO:0006915	apoptotic process	-	IEA	Process
GO:0008134	transcription factor binding	-	ISO	Function
GO:0015031	protein transport	-	IEA	Process
GO:0016018	cyclosporin A binding	21873635.	IBA	Function
GO:0016018	cyclosporin A binding	-	ISO	Function
GO:0016853	isomerase activity	-	IEA	Function
GO:0019899	enzyme binding	-	ISO	Function
GO:0031072	heat shock protein binding	-	ISO	Function
GO:0034389	lipid droplet organization	-	ISO	Process
GO:0042026	protein refolding	21873635.	IBA	Process
GO:0043065	positive regulation of apoptotic process	-	ISO	Process
GO:0045070	positive regulation of viral genome replication	-	ISO	Process
GO:0050714	positive regulation of protein secretion	-	ISO	Process
GO:0051082	unfolded protein binding	21873635.	IBA	Function
GO:0051879	Hsp90 protein binding	-	ISO	Function
GO:0061077	chaperone-mediated protein folding	-	ISO	Process
GO:0065003	protein-containing complex assembly	-	ISO	Process
GO:0071492	cellular response to UV-A	-	ISO	Process