EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027933 (Gene tree)
Gene ID: 229543
Gene Symbol: Ints3
Alias: -
Full Name: integrator complex subunit 3
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 42235 bases
Position: chr3:90391388-90433622
Accession: 2140050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000143196	Ints3	PF10189.9	1.4e-106	1	1
ENSMUSP00000029542	Ints3	PF10189.9	1.4e-106	1	1
ENSMUSP00000071422	Ints3	PF10189.9	1.4e-106	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000199992	-	1891	-	-	- (aa)	-	-
ENSMUST00000029542	-	4337	-	ENSMUSP00000029542	1041 (aa)	-	Q7TPD0
ENSMUST00000071488	-	4038	-	ENSMUSP00000071422	1041 (aa)	-	Q7TPD0
ENSMUST00000198776	-	556	-	-	- (aa)	-	-
ENSMUST00000198562	-	2226	-	-	- (aa)	-	-
ENSMUST00000199158	-	619	-	-	- (aa)	-	-
ENSMUST00000196530	-	3778	-	ENSMUSP00000143196	1035 (aa)	-	A0A0G2JFJ6

Gene Model

Click here to download ENSMUSG00000027933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027933's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027933	Ints3	100	98.656	ENSG00000143624	INTS3	100	100.000	Homo_sapiens
ENSMUSG00000027933	Ints3	98	84.267	ENSAPOG00000018838	ints3	99	84.623	Acanthochromis_polyacanthus
ENSMUSG00000027933	Ints3	100	97.887	ENSAMEG00000012085	INTS3	100	97.887	Ailuropoda_melanoleuca
ENSMUSG00000027933	Ints3	98	84.169	ENSAOCG00000013168	ints3	99	84.524	Amphiprion_ocellaris
ENSMUSG00000027933	Ints3	98	81.121	ENSAPEG00000018538	ints3	99	81.448	Amphiprion_percula
ENSMUSG00000027933	Ints3	100	98.464	ENSANAG00000037379	INTS3	100	98.464	Aotus_nancymaae
ENSMUSG00000027933	Ints3	98	84.464	ENSACLG00000006786	ints3	99	84.821	Astatotilapia_calliptera
ENSMUSG00000027933	Ints3	94	85.451	ENSAMXG00000011437	ints3	100	85.451	Astyanax_mexicanus
ENSMUSG00000027933	Ints3	100	98.463	ENSBTAG00000006235	INTS3	100	98.463	Bos_taurus
ENSMUSG00000027933	Ints3	100	98.656	ENSCJAG00000010155	INTS3	100	98.656	Callithrix_jacchus
ENSMUSG00000027933	Ints3	97	90.705	ENSCAFG00000017453	INTS3	100	90.047	Canis_familiaris
ENSMUSG00000027933	Ints3	95	98.278	ENSCAFG00020010273	INTS3	100	98.278	Canis_lupus_dingo
ENSMUSG00000027933	Ints3	100	98.559	ENSCHIG00000025770	INTS3	100	98.559	Capra_hircus
ENSMUSG00000027933	Ints3	100	98.847	ENSTSYG00000037547	INTS3	100	98.847	Carlito_syrichta
ENSMUSG00000027933	Ints3	95	81.643	ENSCAPG00000013132	INTS3	99	80.629	Cavia_aperea
ENSMUSG00000027933	Ints3	100	94.919	ENSCPOG00000009450	INTS3	100	94.919	Cavia_porcellus
ENSMUSG00000027933	Ints3	100	96.150	ENSCCAG00000024830	INTS3	100	96.150	Cebus_capucinus
ENSMUSG00000027933	Ints3	100	98.562	ENSCATG00000043517	INTS3	100	98.886	Cercocebus_atys
ENSMUSG00000027933	Ints3	100	98.274	ENSCLAG00000003620	INTS3	100	98.274	Chinchilla_lanigera
ENSMUSG00000027933	Ints3	77	99.123	ENSCSAG00000001872	INTS3	100	99.123	Chlorocebus_sabaeus
ENSMUSG00000027933	Ints3	96	91.759	ENSCPBG00000024695	INTS3	98	91.759	Chrysemys_picta_bellii
ENSMUSG00000027933	Ints3	81	49.601	ENSCING00000002537	-	99	48.791	Ciona_intestinalis
ENSMUSG00000027933	Ints3	84	50.113	ENSCSAVG00000011100	-	100	50.113	Ciona_savignyi
ENSMUSG00000027933	Ints3	100	98.466	ENSCANG00000025992	INTS3	100	98.466	Colobus_angolensis_palliatus
ENSMUSG00000027933	Ints3	100	99.424	ENSCGRG00001024236	Ints3	100	99.424	Cricetulus_griseus_chok1gshd
ENSMUSG00000027933	Ints3	100	99.424	ENSCGRG00000004920	Ints3	100	99.424	Cricetulus_griseus_crigri
ENSMUSG00000027933	Ints3	98	80.728	ENSCSEG00000018322	ints3	99	81.151	Cynoglossus_semilaevis
ENSMUSG00000027933	Ints3	98	83.481	ENSCVAG00000004832	ints3	99	83.829	Cyprinodon_variegatus
ENSMUSG00000027933	Ints3	98	85.222	ENSDARG00000016811	ints3	99	85.615	Danio_rerio
ENSMUSG00000027933	Ints3	100	97.409	ENSDNOG00000013903	INTS3	100	97.409	Dasypus_novemcinctus
ENSMUSG00000027933	Ints3	100	98.463	ENSDORG00000001484	Ints3	100	98.463	Dipodomys_ordii
ENSMUSG00000027933	Ints3	84	53.632	FBgn0262117	IntS3	78	53.747	Drosophila_melanogaster
ENSMUSG00000027933	Ints3	88	97.345	ENSETEG00000002204	INTS3	91	97.345	Echinops_telfairi
ENSMUSG00000027933	Ints3	95	66.231	ENSEBUG00000003412	ints3	96	65.126	Eptatretus_burgeri
ENSMUSG00000027933	Ints3	100	98.559	ENSEASG00005000830	INTS3	100	98.559	Equus_asinus_asinus
ENSMUSG00000027933	Ints3	100	98.559	ENSECAG00000022270	INTS3	100	98.559	Equus_caballus
ENSMUSG00000027933	Ints3	100	95.389	ENSEEUG00000004649	INTS3	100	95.389	Erinaceus_europaeus
ENSMUSG00000027933	Ints3	97	84.555	ENSELUG00000000616	ints3	99	84.540	Esox_lucius
ENSMUSG00000027933	Ints3	100	97.791	ENSFCAG00000002744	INTS3	100	97.791	Felis_catus
ENSMUSG00000027933	Ints3	100	97.990	ENSFDAG00000005767	INTS3	100	97.990	Fukomys_damarensis
ENSMUSG00000027933	Ints3	91	79.692	ENSFHEG00000016968	ints3	98	80.139	Fundulus_heteroclitus
ENSMUSG00000027933	Ints3	98	79.765	ENSGMOG00000004467	ints3	99	80.178	Gadus_morhua
ENSMUSG00000027933	Ints3	95	92.951	ENSGALG00000027046	INTS3	100	88.107	Gallus_gallus
ENSMUSG00000027933	Ints3	85	83.730	ENSGAFG00000012876	ints3	92	83.620	Gambusia_affinis
ENSMUSG00000027933	Ints3	98	82.566	ENSGACG00000010341	ints3	99	82.922	Gasterosteus_aculeatus
ENSMUSG00000027933	Ints3	96	94.721	ENSGAGG00000000206	INTS3	99	94.841	Gopherus_agassizii
ENSMUSG00000027933	Ints3	100	98.656	ENSGGOG00000003835	INTS3	100	98.656	Gorilla_gorilla
ENSMUSG00000027933	Ints3	98	80.747	ENSHBUG00000015312	ints3	99	81.070	Haplochromis_burtoni
ENSMUSG00000027933	Ints3	100	97.697	ENSHGLG00000008354	INTS3	100	97.697	Heterocephalus_glaber_female
ENSMUSG00000027933	Ints3	99	97.589	ENSHGLG00100018661	INTS3	100	97.589	Heterocephalus_glaber_male
ENSMUSG00000027933	Ints3	98	81.791	ENSHCOG00000009084	ints3	99	82.557	Hippocampus_comes
ENSMUSG00000027933	Ints3	98	83.431	ENSIPUG00000016699	ints3	99	83.972	Ictalurus_punctatus
ENSMUSG00000027933	Ints3	100	98.847	ENSSTOG00000000670	INTS3	100	98.847	Ictidomys_tridecemlineatus
ENSMUSG00000027933	Ints3	100	97.214	ENSJJAG00000019885	Ints3	100	97.214	Jaculus_jaculus
ENSMUSG00000027933	Ints3	98	85.054	ENSKMAG00000001336	ints3	99	85.417	Kryptolebias_marmoratus
ENSMUSG00000027933	Ints3	98	83.677	ENSLBEG00000024260	ints3	99	84.028	Labrus_bergylta
ENSMUSG00000027933	Ints3	97	87.759	ENSLACG00000004421	INTS3	99	87.822	Latimeria_chalumnae
ENSMUSG00000027933	Ints3	100	98.367	ENSLAFG00000002663	INTS3	100	98.367	Loxodonta_africana
ENSMUSG00000027933	Ints3	100	98.562	ENSMFAG00000008338	INTS3	100	98.562	Macaca_fascicularis
ENSMUSG00000027933	Ints3	100	98.562	ENSMMUG00000019482	INTS3	100	98.562	Macaca_mulatta
ENSMUSG00000027933	Ints3	100	92.905	ENSMNEG00000042397	INTS3	100	93.480	Macaca_nemestrina
ENSMUSG00000027933	Ints3	100	98.562	ENSMLEG00000041804	INTS3	100	98.562	Mandrillus_leucophaeus
ENSMUSG00000027933	Ints3	98	84.857	ENSMAMG00000022219	ints3	99	85.218	Mastacembelus_armatus
ENSMUSG00000027933	Ints3	98	84.464	ENSMZEG00005012255	ints3	99	84.821	Maylandia_zebra
ENSMUSG00000027933	Ints3	100	99.135	ENSMAUG00000003190	Ints3	100	99.135	Mesocricetus_auratus
ENSMUSG00000027933	Ints3	100	99.039	ENSMICG00000008832	INTS3	100	99.039	Microcebus_murinus
ENSMUSG00000027933	Ints3	100	99.520	ENSMOCG00000013737	Ints3	100	99.520	Microtus_ochrogaster
ENSMUSG00000027933	Ints3	98	83.744	ENSMMOG00000017619	ints3	99	84.028	Mola_mola
ENSMUSG00000027933	Ints3	100	96.926	ENSMODG00000017354	INTS3	100	96.926	Monodelphis_domestica
ENSMUSG00000027933	Ints3	98	85.054	ENSMALG00000011873	ints3	99	85.417	Monopterus_albus
ENSMUSG00000027933	Ints3	100	100.000	MGP_CAROLIEiJ_G0025235	Ints3	100	100.000	Mus_caroli
ENSMUSG00000027933	Ints3	100	97.022	MGP_PahariEiJ_G0026679	Ints3	100	97.022	Mus_pahari
ENSMUSG00000027933	Ints3	100	99.904	MGP_SPRETEiJ_G0026178	Ints3	100	99.904	Mus_spretus
ENSMUSG00000027933	Ints3	95	98.176	ENSMPUG00000008221	INTS3	100	98.176	Mustela_putorius_furo
ENSMUSG00000027933	Ints3	98	97.544	ENSMLUG00000001857	INTS3	100	97.544	Myotis_lucifugus
ENSMUSG00000027933	Ints3	100	98.847	ENSNGAG00000023917	Ints3	100	98.847	Nannospalax_galili
ENSMUSG00000027933	Ints3	98	82.498	ENSNBRG00000021301	ints3	99	82.837	Neolamprologus_brichardi
ENSMUSG00000027933	Ints3	97	95.252	ENSNLEG00000010578	INTS3	100	94.168	Nomascus_leucogenys
ENSMUSG00000027933	Ints3	100	90.586	ENSMEUG00000006202	INTS3	100	90.586	Notamacropus_eugenii
ENSMUSG00000027933	Ints3	100	92.795	ENSOPRG00000003801	INTS3	100	92.795	Ochotona_princeps
ENSMUSG00000027933	Ints3	97	95.536	ENSODEG00000012581	INTS3	100	93.607	Octodon_degus
ENSMUSG00000027933	Ints3	98	84.169	ENSONIG00000007567	ints3	99	84.524	Oreochromis_niloticus
ENSMUSG00000027933	Ints3	100	98.367	ENSOCUG00000005436	INTS3	100	98.367	Oryctolagus_cuniculus
ENSMUSG00000027933	Ints3	98	83.776	ENSORLG00000001502	ints3	99	84.127	Oryzias_latipes
ENSMUSG00000027933	Ints3	98	83.972	ENSORLG00020010774	ints3	99	84.325	Oryzias_latipes_hni
ENSMUSG00000027933	Ints3	98	83.874	ENSORLG00015017985	ints3	99	84.226	Oryzias_latipes_hsok
ENSMUSG00000027933	Ints3	98	84.366	ENSOMEG00000009881	ints3	99	84.722	Oryzias_melastigma
ENSMUSG00000027933	Ints3	100	98.367	ENSOGAG00000001080	INTS3	100	98.367	Otolemur_garnettii
ENSMUSG00000027933	Ints3	100	98.559	ENSOARG00000001095	INTS3	100	98.559	Ovis_aries
ENSMUSG00000027933	Ints3	100	98.656	ENSPPAG00000034436	INTS3	100	98.656	Pan_paniscus
ENSMUSG00000027933	Ints3	100	97.791	ENSPPRG00000023995	INTS3	100	97.791	Panthera_pardus
ENSMUSG00000027933	Ints3	99	98.155	ENSPTIG00000012061	INTS3	99	98.155	Panthera_tigris_altaica
ENSMUSG00000027933	Ints3	100	98.656	ENSPTRG00000001360	INTS3	100	98.656	Pan_troglodytes
ENSMUSG00000027933	Ints3	94	98.876	ENSPANG00000016455	INTS3	91	100.000	Papio_anubis
ENSMUSG00000027933	Ints3	97	85.419	ENSPKIG00000014552	ints3	99	85.629	Paramormyrops_kingsleyae
ENSMUSG00000027933	Ints3	98	83.023	ENSPMGG00000008191	ints3	99	83.399	Periophthalmus_magnuspinnatus
ENSMUSG00000027933	Ints3	100	99.328	ENSPEMG00000009736	Ints3	100	99.328	Peromyscus_maniculatus_bairdii
ENSMUSG00000027933	Ints3	95	75.250	ENSPMAG00000008569	ints3	100	73.952	Petromyzon_marinus
ENSMUSG00000027933	Ints3	100	96.926	ENSPCIG00000029360	INTS3	100	96.926	Phascolarctos_cinereus
ENSMUSG00000027933	Ints3	98	83.092	ENSPFOG00000009261	ints3	99	83.431	Poecilia_formosa
ENSMUSG00000027933	Ints3	98	84.562	ENSPLAG00000006426	ints3	99	84.921	Poecilia_latipinna
ENSMUSG00000027933	Ints3	98	84.562	ENSPMEG00000015206	ints3	99	84.921	Poecilia_mexicana
ENSMUSG00000027933	Ints3	98	84.366	ENSPREG00000015731	ints3	99	84.722	Poecilia_reticulata
ENSMUSG00000027933	Ints3	100	98.562	ENSPPYG00000000797	INTS3	100	98.562	Pongo_abelii
ENSMUSG00000027933	Ints3	97	95.833	ENSPCAG00000016615	INTS3	100	94.909	Procavia_capensis
ENSMUSG00000027933	Ints3	100	96.350	ENSPCOG00000022153	INTS3	100	96.350	Propithecus_coquereli
ENSMUSG00000027933	Ints3	97	91.700	ENSPVAG00000011079	INTS3	100	91.100	Pteropus_vampyrus
ENSMUSG00000027933	Ints3	98	84.366	ENSPNYG00000010499	ints3	99	84.722	Pundamilia_nyererei
ENSMUSG00000027933	Ints3	98	85.378	ENSPNAG00000027555	ints3	99	85.927	Pygocentrus_nattereri
ENSMUSG00000027933	Ints3	100	99.616	ENSRNOG00000015153	Ints3	100	99.616	Rattus_norvegicus
ENSMUSG00000027933	Ints3	100	86.769	ENSRBIG00000034979	INTS3	93	100.000	Rhinopithecus_bieti
ENSMUSG00000027933	Ints3	100	100.000	ENSRROG00000032561	INTS3	100	98.562	Rhinopithecus_roxellana
ENSMUSG00000027933	Ints3	100	98.656	ENSSBOG00000027353	INTS3	100	98.656	Saimiri_boliviensis_boliviensis
ENSMUSG00000027933	Ints3	97	96.226	ENSSHAG00000010628	INTS3	100	96.226	Sarcophilus_harrisii
ENSMUSG00000027933	Ints3	94	83.737	ENSSFOG00015009936	ints3	100	86.162	Scleropages_formosus
ENSMUSG00000027933	Ints3	98	78.663	ENSSMAG00000014949	ints3	99	78.968	Scophthalmus_maximus
ENSMUSG00000027933	Ints3	98	84.562	ENSSDUG00000000498	ints3	99	84.921	Seriola_dumerili
ENSMUSG00000027933	Ints3	98	84.562	ENSSLDG00000000547	ints3	99	84.921	Seriola_lalandi_dorsalis
ENSMUSG00000027933	Ints3	98	84.169	ENSSPAG00000005927	ints3	99	84.524	Stegastes_partitus
ENSMUSG00000027933	Ints3	100	98.271	ENSSSCG00000006571	INTS3	100	98.271	Sus_scrofa
ENSMUSG00000027933	Ints3	98	82.031	ENSTNIG00000019793	ints3	99	82.266	Tetraodon_nigroviridis
ENSMUSG00000027933	Ints3	78	100.000	ENSTBEG00000016928	INTS3	81	100.000	Tupaia_belangeri
ENSMUSG00000027933	Ints3	100	93.282	ENSTTRG00000014769	INTS3	100	93.282	Tursiops_truncatus
ENSMUSG00000027933	Ints3	100	97.887	ENSUAMG00000019821	INTS3	100	97.887	Ursus_americanus
ENSMUSG00000027933	Ints3	100	97.887	ENSUMAG00000020431	INTS3	100	97.887	Ursus_maritimus
ENSMUSG00000027933	Ints3	98	84.661	ENSXMAG00000017462	ints3	99	85.020	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006281	DNA repair	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0007093	mitotic cell cycle checkpoint	-	ISO	Process
GO:0010212	response to ionizing radiation	-	ISO	Process
GO:0016180	snRNA processing	-	ISO	Process
GO:0032039	integrator complex	-	ISO	Component
GO:0070876	SOSS complex	-	ISO	Component