EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000027998 (Gene tree)
Gene ID: 53317
Gene Symbol: Plrg1
Alias: Tango4
Full Name: pleiotropic regulator 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 16834
Position: chr3: 83055522-83072355
Accession: 1858197
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000135813	-	564	-	-	- (aa)	-	-
ENSMUST00000151915	-	911	-	-	- (aa)	-	-
ENSMUST00000029628	-	1749	-	ENSMUSP00000029628	383 (aa)	-	F8WI31
ENSMUST00000122128	-	1608	-	ENSMUSP00000113614	504 (aa)	-	D3Z4V1
ENSMUST00000150268	-	1851	-	ENSMUSP00000114968	513 (aa)	-	Q922V4

Gene Model

Click here to download ENSMUSG00000027998's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000027998's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000027998	Plrg1	100	96.597	ENSG00000171566	PLRG1	99	99.346	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0000974	Prp19 complex	21873635.	IBA	Component
GO:0001650	fibrillar center	-	ISO	Component
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005662	DNA replication factor A complex	21873635.	IBA	Component
GO:0005662	DNA replication factor A complex	-	ISO	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016607	nuclear speck	-	ISO	Component
GO:0031965	nuclear membrane	-	ISO	Component
GO:0034504	protein localization to nucleus	19307306.	IMP	Process
GO:0071007	U2-type catalytic step 2 spliceosome	-	ISO	Component
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	21873635.	IBA	Component
GO:1900087	positive regulation of G1/S transition of mitotic cell cycle	19307306.	IMP	Process