EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028069 (Gene tree)
Gene ID: 66614
Gene Symbol: Gpatch4
Alias: 2610029K21Rik|Gpatc4
Full Name: G patch domain containing 4
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 12886 bases
Position: chr3:88043108-88055993
Accession: 1913864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000141477	G-patch	PF01585.23	2.6e-09	1	1
ENSMUSP00000029707	G-patch	PF01585.23	4.5e-09	1	1
ENSMUSP00000132699	G-patch	PF01585.23	4.5e-09	1	1
ENSMUSP00000141786	G-patch	PF01585.23	4.5e-09	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000194258	-	959	-	ENSMUSP00000141477	239 (aa)	-	A0A0A6YWB3
ENSMUST00000029707	-	1630	-	ENSMUSP00000029707	415 (aa)	-	Q3TFK5
ENSMUST00000193398	-	2210	-	ENSMUSP00000141786	415 (aa)	-	Q3TFK5
ENSMUST00000194380	-	745	-	-	- (aa)	-	-
ENSMUST00000166021	-	1768	-	ENSMUSP00000132699	415 (aa)	-	Q3TFK5

Gene Model

Click here to download ENSMUSG00000028069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028069	Gpatch4	78	83.422	ENSG00000160818	GPATCH4	95	85.841	Homo_sapiens
ENSMUSG00000028069	Gpatch4	87	43.694	ENSAPOG00000008436	gpatch4	51	47.030	Acanthochromis_polyacanthus
ENSMUSG00000028069	Gpatch4	78	85.027	ENSAMEG00000014829	GPATCH4	61	73.180	Ailuropoda_melanoleuca
ENSMUSG00000028069	Gpatch4	51	47.581	ENSACIG00000017309	-	63	59.740	Amphilophus_citrinellus
ENSMUSG00000028069	Gpatch4	87	43.111	ENSAOCG00000015494	gpatch4	54	44.186	Amphiprion_ocellaris
ENSMUSG00000028069	Gpatch4	90	42.241	ENSAPEG00000022243	gpatch4	51	46.305	Amphiprion_percula
ENSMUSG00000028069	Gpatch4	84	45.413	ENSATEG00000006359	gpatch4	50	46.330	Anabas_testudineus
ENSMUSG00000028069	Gpatch4	78	83.957	ENSANAG00000035354	GPATCH4	83	64.725	Aotus_nancymaae
ENSMUSG00000028069	Gpatch4	82	44.811	ENSACLG00000010456	gpatch4	58	52.525	Astatotilapia_calliptera
ENSMUSG00000028069	Gpatch4	78	83.422	ENSBTAG00000000406	GPATCH4	87	61.708	Bos_taurus
ENSMUSG00000028069	Gpatch4	51	81.818	ENSCJAG00000031662	-	84	81.818	Callithrix_jacchus
ENSMUSG00000028069	Gpatch4	82	80.711	ENSCJAG00000006048	GPATCH4	92	84.821	Callithrix_jacchus
ENSMUSG00000028069	Gpatch4	82	82.051	ENSCAFG00000016788	GPATCH4	68	68.166	Canis_familiaris
ENSMUSG00000028069	Gpatch4	78	82.353	ENSCHIG00000021295	GPATCH4	87	62.185	Capra_hircus
ENSMUSG00000028069	Gpatch4	97	76.496	ENSCCAG00000036114	GPATCH4	92	84.821	Cebus_capucinus
ENSMUSG00000028069	Gpatch4	95	77.632	ENSCATG00000042152	GPATCH4	82	82.051	Cercocebus_atys
ENSMUSG00000028069	Gpatch4	99	77.824	ENSCLAG00000002967	-	56	77.917	Chinchilla_lanigera
ENSMUSG00000028069	Gpatch4	84	80.500	ENSCSAG00000002161	GPATCH4	91	61.139	Chlorocebus_sabaeus
ENSMUSG00000028069	Gpatch4	77	51.531	ENSCPBG00000025803	GPATCH4	64	52.041	Chrysemys_picta_bellii
ENSMUSG00000028069	Gpatch4	82	36.087	ENSCING00000004717	-	94	36.402	Ciona_intestinalis
ENSMUSG00000028069	Gpatch4	67	42.515	ENSCSAVG00000003297	-	64	42.515	Ciona_savignyi
ENSMUSG00000028069	Gpatch4	95	77.193	ENSCANG00000030031	GPATCH4	82	82.906	Colobus_angolensis_palliatus
ENSMUSG00000028069	Gpatch4	99	89.076	ENSCGRG00001016898	Gpatch4	97	77.387	Cricetulus_griseus_chok1gshd
ENSMUSG00000028069	Gpatch4	99	89.076	ENSCGRG00000008399	Gpatch4	97	77.387	Cricetulus_griseus_crigri
ENSMUSG00000028069	Gpatch4	80	43.939	ENSCSEG00000012030	gpatch4	98	35.329	Cynoglossus_semilaevis
ENSMUSG00000028069	Gpatch4	76	46.465	ENSDARG00000091931	gpatch4	69	47.727	Danio_rerio
ENSMUSG00000028069	Gpatch4	99	77.119	ENSDNOG00000034673	GPATCH4	68	68.065	Dasypus_novemcinctus
ENSMUSG00000028069	Gpatch4	73	39.487	FBgn0039829	CG15561	54	39.487	Drosophila_melanogaster
ENSMUSG00000028069	Gpatch4	94	70.815	ENSETEG00000000659	-	75	58.383	Echinops_telfairi
ENSMUSG00000028069	Gpatch4	65	44.048	ENSEBUG00000006498	-	55	44.118	Eptatretus_burgeri
ENSMUSG00000028069	Gpatch4	99	78.992	ENSEASG00005018284	GPATCH4	71	71.617	Equus_asinus_asinus
ENSMUSG00000028069	Gpatch4	84	82.000	ENSECAG00000011135	GPATCH4	88	71.761	Equus_caballus
ENSMUSG00000028069	Gpatch4	82	79.082	ENSEEUG00000003221	-	60	70.518	Erinaceus_europaeus
ENSMUSG00000028069	Gpatch4	90	79.070	ENSFCAG00000006554	GPATCH4	71	70.588	Felis_catus
ENSMUSG00000028069	Gpatch4	95	41.224	ENSFHEG00000003097	gpatch4	69	40.449	Fundulus_heteroclitus
ENSMUSG00000028069	Gpatch4	81	43.689	ENSGALG00000048365	GPATCH4	56	44.390	Gallus_gallus
ENSMUSG00000028069	Gpatch4	84	43.062	ENSGAFG00000021732	gpatch4	69	43.062	Gambusia_affinis
ENSMUSG00000028069	Gpatch4	77	47.500	ENSGACG00000013318	gpatch4	60	48.500	Gasterosteus_aculeatus
ENSMUSG00000028069	Gpatch4	77	51.531	ENSGAGG00000020710	GPATCH4	87	43.561	Gopherus_agassizii
ENSMUSG00000028069	Gpatch4	80	82.199	ENSGGOG00000000753	GPATCH4	82	82.906	Gorilla_gorilla
ENSMUSG00000028069	Gpatch4	82	44.811	ENSHBUG00000009675	gpatch4	57	52.525	Haplochromis_burtoni
ENSMUSG00000028069	Gpatch4	77	45.078	ENSHCOG00000007016	gpatch4	73	40.873	Hippocampus_comes
ENSMUSG00000028069	Gpatch4	85	46.544	ENSIPUG00000006348	gpatch4	71	45.238	Ictalurus_punctatus
ENSMUSG00000028069	Gpatch4	99	72.034	ENSSTOG00000020510	GPATCH4	89	82.051	Ictidomys_tridecemlineatus
ENSMUSG00000028069	Gpatch4	84	44.843	ENSKMAG00000015765	gpatch4	59	45.291	Kryptolebias_marmoratus
ENSMUSG00000028069	Gpatch4	83	44.292	ENSLBEG00000009364	-	65	45.581	Labrus_bergylta
ENSMUSG00000028069	Gpatch4	82	48.792	ENSLACG00000009700	GPATCH4	60	48.792	Latimeria_chalumnae
ENSMUSG00000028069	Gpatch4	81	43.662	ENSLOCG00000008820	gpatch4	61	44.131	Lepisosteus_oculatus
ENSMUSG00000028069	Gpatch4	99	59.244	ENSLAFG00000028327	-	84	51.791	Loxodonta_africana
ENSMUSG00000028069	Gpatch4	80	80.628	ENSMFAG00000030965	GPATCH4	82	82.051	Macaca_fascicularis
ENSMUSG00000028069	Gpatch4	84	80.000	ENSMMUG00000002624	GPATCH4	82	82.906	Macaca_mulatta
ENSMUSG00000028069	Gpatch4	82	79.487	ENSMNEG00000028844	GPATCH4	82	82.051	Macaca_nemestrina
ENSMUSG00000028069	Gpatch4	93	77.130	ENSMLEG00000037909	GPATCH4	82	81.197	Mandrillus_leucophaeus
ENSMUSG00000028069	Gpatch4	92	38.750	ENSMZEG00005017452	gpatch4	55	44.601	Maylandia_zebra
ENSMUSG00000028069	Gpatch4	68	71.605	ENSMICG00000034025	-	93	74.775	Microcebus_murinus
ENSMUSG00000028069	Gpatch4	92	56.818	ENSMICG00000038615	-	95	62.698	Microcebus_murinus
ENSMUSG00000028069	Gpatch4	97	75.536	ENSMICG00000013624	GPATCH4	92	65.418	Microcebus_murinus
ENSMUSG00000028069	Gpatch4	85	44.344	ENSMMOG00000017095	gpatch4	96	50.467	Mola_mola
ENSMUSG00000028069	Gpatch4	78	61.376	ENSMODG00000014154	-	93	61.376	Monodelphis_domestica
ENSMUSG00000028069	Gpatch4	99	59.751	ENSMODG00000016818	-	88	59.684	Monodelphis_domestica
ENSMUSG00000028069	Gpatch4	90	43.348	ENSMALG00000003793	gpatch4	50	45.933	Monopterus_albus
ENSMUSG00000028069	Gpatch4	100	94.940	MGP_CAROLIEiJ_G0025152	Gpatch4	100	94.940	Mus_caroli
ENSMUSG00000028069	Gpatch4	99	95.798	MGP_PahariEiJ_G0026595	-	99	95.798	Mus_pahari
ENSMUSG00000028069	Gpatch4	100	99.582	MGP_SPRETEiJ_G0026093	Gpatch4	100	99.582	Mus_spretus
ENSMUSG00000028069	Gpatch4	78	82.353	ENSMPUG00000004136	-	60	71.875	Mustela_putorius_furo
ENSMUSG00000028069	Gpatch4	85	79.703	ENSMLUG00000009571	GPATCH4	69	65.902	Myotis_lucifugus
ENSMUSG00000028069	Gpatch4	51	77.049	ENSNGAG00000019958	-	92	77.049	Nannospalax_galili
ENSMUSG00000028069	Gpatch4	93	76.682	ENSNLEG00000027678	GPATCH4	89	62.985	Nomascus_leucogenys
ENSMUSG00000028069	Gpatch4	83	58.794	ENSMEUG00000006861	-	90	52.800	Notamacropus_eugenii
ENSMUSG00000028069	Gpatch4	82	79.592	ENSOPRG00000000586	GPATCH4	58	71.032	Ochotona_princeps
ENSMUSG00000028069	Gpatch4	77	45.771	ENSONIG00000002261	gpatch4	51	46.766	Oreochromis_niloticus
ENSMUSG00000028069	Gpatch4	80	81.771	ENSOCUG00000025781	-	70	65.064	Oryctolagus_cuniculus
ENSMUSG00000028069	Gpatch4	82	43.256	ENSORLG00020013892	gpatch4	59	43.925	Oryzias_latipes_hni
ENSMUSG00000028069	Gpatch4	85	41.256	ENSORLG00015019725	gpatch4	60	43.925	Oryzias_latipes_hsok
ENSMUSG00000028069	Gpatch4	95	36.364	ENSOMEG00000000529	gpatch4	53	39.286	Oryzias_melastigma
ENSMUSG00000028069	Gpatch4	82	83.673	ENSOGAG00000006698	-	72	71.704	Otolemur_garnettii
ENSMUSG00000028069	Gpatch4	78	82.353	ENSOARG00000006123	GPATCH4	87	62.570	Ovis_aries
ENSMUSG00000028069	Gpatch4	76	84.066	ENSPPAG00000028364	-	82	82.906	Pan_paniscus
ENSMUSG00000028069	Gpatch4	90	79.070	ENSPPRG00000002106	GPATCH4	71	71.094	Panthera_pardus
ENSMUSG00000028069	Gpatch4	92	79.545	ENSPTIG00000006717	GPATCH4	79	85.586	Panthera_tigris_altaica
ENSMUSG00000028069	Gpatch4	76	84.066	ENSPTRG00000001464	GPATCH4	82	82.906	Pan_troglodytes
ENSMUSG00000028069	Gpatch4	93	78.027	ENSPANG00000018543	GPATCH4	82	82.906	Papio_anubis
ENSMUSG00000028069	Gpatch4	84	52.632	ENSPSIG00000011317	GPATCH4	74	50.467	Pelodiscus_sinensis
ENSMUSG00000028069	Gpatch4	85	41.704	ENSPMAG00000009175	gpatch4	67	45.408	Petromyzon_marinus
ENSMUSG00000028069	Gpatch4	84	43.119	ENSPFOG00000011835	gpatch4	56	43.119	Poecilia_formosa
ENSMUSG00000028069	Gpatch4	84	42.661	ENSPLAG00000019504	gpatch4	56	42.661	Poecilia_latipinna
ENSMUSG00000028069	Gpatch4	84	43.119	ENSPMEG00000001375	gpatch4	57	43.119	Poecilia_mexicana
ENSMUSG00000028069	Gpatch4	84	41.284	ENSPREG00000017029	gpatch4	59	42.202	Poecilia_reticulata
ENSMUSG00000028069	Gpatch4	95	77.632	ENSPPYG00000000711	-	78	62.178	Pongo_abelii
ENSMUSG00000028069	Gpatch4	67	74.534	ENSPCOG00000013948	-	89	73.810	Propithecus_coquereli
ENSMUSG00000028069	Gpatch4	66	82.166	ENSPCOG00000023130	-	76	84.821	Propithecus_coquereli
ENSMUSG00000028069	Gpatch4	91	74.654	ENSPVAG00000007505	-	65	65.000	Pteropus_vampyrus
ENSMUSG00000028069	Gpatch4	82	44.811	ENSPNYG00000018461	gpatch4	54	45.755	Pundamilia_nyererei
ENSMUSG00000028069	Gpatch4	99	93.277	ENSRNOG00000018969	Gpatch4	97	86.835	Rattus_norvegicus
ENSMUSG00000028069	Gpatch4	95	78.070	ENSRBIG00000005742	GPATCH4	82	82.051	Rhinopithecus_bieti
ENSMUSG00000028069	Gpatch4	95	78.070	ENSRROG00000044157	GPATCH4	82	82.051	Rhinopithecus_roxellana
ENSMUSG00000028069	Gpatch4	85	81.683	ENSSBOG00000024840	GPATCH4	70	68.690	Saimiri_boliviensis_boliviensis
ENSMUSG00000028069	Gpatch4	93	59.556	ENSSHAG00000015436	-	89	57.312	Sarcophilus_harrisii
ENSMUSG00000028069	Gpatch4	93	40.239	ENSSMAG00000016329	gpatch4	54	43.333	Scophthalmus_maximus
ENSMUSG00000028069	Gpatch4	77	44.608	ENSSDUG00000006583	gpatch4	53	46.119	Seriola_dumerili
ENSMUSG00000028069	Gpatch4	77	44.608	ENSSLDG00000012365	gpatch4	53	46.119	Seriola_lalandi_dorsalis
ENSMUSG00000028069	Gpatch4	67	64.375	ENSSARG00000008606	-	73	50.658	Sorex_araneus
ENSMUSG00000028069	Gpatch4	78	51.269	ENSSPUG00000002674	GPATCH4	66	51.777	Sphenodon_punctatus
ENSMUSG00000028069	Gpatch4	87	40.969	ENSSPAG00000011683	gpatch4	51	44.390	Stegastes_partitus
ENSMUSG00000028069	Gpatch4	82	82.051	ENSSSCG00000006481	GPATCH4	56	75.918	Sus_scrofa
ENSMUSG00000028069	Gpatch4	75	44.828	ENSTNIG00000005156	gpatch4	69	46.000	Tetraodon_nigroviridis
ENSMUSG00000028069	Gpatch4	78	82.888	ENSTTRG00000001113	GPATCH4	86	65.130	Tursiops_truncatus
ENSMUSG00000028069	Gpatch4	78	84.492	ENSUAMG00000013407	GPATCH4	98	55.787	Ursus_americanus
ENSMUSG00000028069	Gpatch4	78	84.492	ENSUMAG00000017797	GPATCH4	65	70.629	Ursus_maritimus
ENSMUSG00000028069	Gpatch4	82	71.429	ENSVVUG00000006004	-	84	82.301	Vulpes_vulpes
ENSMUSG00000028069	Gpatch4	77	46.734	ENSXETG00000020397	gpatch4	91	37.710	Xenopus_tropicalis
ENSMUSG00000028069	Gpatch4	92	41.453	ENSXCOG00000003911	gpatch4	57	43.458	Xiphophorus_couchianus
ENSMUSG00000028069	Gpatch4	92	40.756	ENSXMAG00000024520	gpatch4	57	42.661	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002244	hematopoietic progenitor cell differentiation	24029230.	IGI	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component