EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028085 (Gene tree)
Gene ID: 229487
Gene Symbol: Gatb
Alias: 9430026F02Rik|Pet112|Pet112l
Full Name: glutamyl-tRNA(Gln) amidotransferase%2C subunit B
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 81504 bases
Position: chr3:85574119-85655622
Accession: 2442496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000119949	GatB_Yqey	PF02637.18	1.2e-44	1	1
ENSMUSP00000103301	GatB_Yqey	PF02637.18	3e-33	1	1
ENSMUSP00000103299	GatB_Yqey	PF02637.18	2.7e-15	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000127348	-	3469	XM_006501330	ENSMUSP00000119949	557 (aa)	XP_006501393	Q99JT1
ENSMUST00000107674	-	1980	XM_006501329	ENSMUSP00000103301	553 (aa)	XP_006501392	Q8BW84
ENSMUST00000134273	-	366	-	-	- (aa)	-	-
ENSMUST00000107672	-	1820	-	ENSMUSP00000103299	472 (aa)	-	Q3TLZ6
ENSMUST00000029726	-	1856	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028085's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00970	Aminoacyl-tRNA biosynthesis	KEGG
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028085	Gatb	99	87.021	ENSG00000059691	GATB	100	85.458	Homo_sapiens
ENSMUSG00000028085	Gatb	93	67.727	ENSAPOG00000022676	gatb	96	64.259	Acanthochromis_polyacanthus
ENSMUSG00000028085	Gatb	99	84.778	ENSAMEG00000018434	GATB	99	82.826	Ailuropoda_melanoleuca
ENSMUSG00000028085	Gatb	74	69.801	ENSACIG00000015827	gatb	100	64.531	Amphilophus_citrinellus
ENSMUSG00000028085	Gatb	87	71.046	ENSAOCG00000009635	gatb	95	66.801	Amphiprion_ocellaris
ENSMUSG00000028085	Gatb	87	68.127	ENSAPEG00000023666	gatb	93	64.315	Amphiprion_percula
ENSMUSG00000028085	Gatb	91	68.056	ENSATEG00000011821	gatb	96	64.159	Anabas_testudineus
ENSMUSG00000028085	Gatb	86	77.451	ENSAPLG00000003933	GATB	99	74.089	Anas_platyrhynchos
ENSMUSG00000028085	Gatb	99	70.253	ENSACAG00000002772	GATB	100	67.679	Anolis_carolinensis
ENSMUSG00000028085	Gatb	99	86.809	ENSANAG00000020953	GATB	100	84.740	Aotus_nancymaae
ENSMUSG00000028085	Gatb	82	65.208	ENSACLG00000026091	gatb	92	65.208	Astatotilapia_calliptera
ENSMUSG00000028085	Gatb	83	67.766	ENSAMXG00000021662	gatb	89	61.523	Astyanax_mexicanus
ENSMUSG00000028085	Gatb	99	85.106	ENSBTAG00000013914	GATB	99	82.554	Bos_taurus
ENSMUSG00000028085	Gatb	99	86.596	ENSCJAG00000002147	GATB	99	84.532	Callithrix_jacchus
ENSMUSG00000028085	Gatb	99	83.830	ENSCAFG00000008088	GATB	99	81.295	Canis_familiaris
ENSMUSG00000028085	Gatb	99	83.830	ENSCAFG00020026686	GATB	98	83.864	Canis_lupus_dingo
ENSMUSG00000028085	Gatb	99	85.106	ENSCHIG00000020111	GATB	99	82.554	Capra_hircus
ENSMUSG00000028085	Gatb	99	88.511	ENSTSYG00000009976	GATB	99	86.151	Carlito_syrichta
ENSMUSG00000028085	Gatb	99	70.705	ENSCAPG00000010977	GATB	99	70.705	Cavia_aperea
ENSMUSG00000028085	Gatb	99	81.702	ENSCPOG00000005023	GATB	99	81.555	Cavia_porcellus
ENSMUSG00000028085	Gatb	99	84.681	ENSCCAG00000021445	GATB	95	84.713	Cebus_capucinus
ENSMUSG00000028085	Gatb	99	86.809	ENSCATG00000034281	GATB	99	85.072	Cercocebus_atys
ENSMUSG00000028085	Gatb	100	85.169	ENSCLAG00000005772	GATB	100	85.169	Chinchilla_lanigera
ENSMUSG00000028085	Gatb	99	87.021	ENSCSAG00000003318	GATB	99	84.532	Chlorocebus_sabaeus
ENSMUSG00000028085	Gatb	99	82.766	ENSCHOG00000008476	GATB	99	80.576	Choloepus_hoffmanni
ENSMUSG00000028085	Gatb	94	71.681	ENSCPBG00000025824	GATB	97	69.517	Chrysemys_picta_bellii
ENSMUSG00000028085	Gatb	99	86.596	ENSCANG00000029227	GATB	99	84.353	Colobus_angolensis_palliatus
ENSMUSG00000028085	Gatb	100	91.949	ENSCGRG00001024051	GATB	100	91.949	Cricetulus_griseus_chok1gshd
ENSMUSG00000028085	Gatb	100	91.949	ENSCGRG00000012974	GATB	100	91.949	Cricetulus_griseus_crigri
ENSMUSG00000028085	Gatb	90	69.249	ENSCSEG00000004009	gatb	100	62.929	Cynoglossus_semilaevis
ENSMUSG00000028085	Gatb	87	69.830	ENSCVAG00000017180	gatb	99	65.996	Cyprinodon_variegatus
ENSMUSG00000028085	Gatb	87	72.195	ENSDARG00000037309	gatb	90	66.465	Danio_rerio
ENSMUSG00000028085	Gatb	99	82.839	ENSDNOG00000012683	GATB	100	81.183	Dasypus_novemcinctus
ENSMUSG00000028085	Gatb	99	86.200	ENSDORG00000010241	Gatb	99	85.199	Dipodomys_ordii
ENSMUSG00000028085	Gatb	88	51.807	FBgn0039153	GatB	97	46.589	Drosophila_melanogaster
ENSMUSG00000028085	Gatb	99	61.871	ENSETEG00000002356	GATB	99	61.871	Echinops_telfairi
ENSMUSG00000028085	Gatb	99	85.957	ENSEASG00005015868	GATB	99	84.532	Equus_asinus_asinus
ENSMUSG00000028085	Gatb	99	84.043	ENSECAG00000003539	GATB	99	82.914	Equus_caballus
ENSMUSG00000028085	Gatb	85	71.026	ENSEEUG00000002311	GATB	85	71.026	Erinaceus_europaeus
ENSMUSG00000028085	Gatb	90	67.453	ENSELUG00000013584	gatb	98	63.725	Esox_lucius
ENSMUSG00000028085	Gatb	99	84.894	ENSFCAG00000003207	GATB	99	82.374	Felis_catus
ENSMUSG00000028085	Gatb	80	71.365	ENSFALG00000002209	GATB	99	71.365	Ficedula_albicollis
ENSMUSG00000028085	Gatb	100	84.110	ENSFDAG00000006426	GATB	100	84.110	Fukomys_damarensis
ENSMUSG00000028085	Gatb	90	68.545	ENSFHEG00000008643	GATB	93	64.453	Fundulus_heteroclitus
ENSMUSG00000028085	Gatb	86	70.443	ENSGMOG00000001575	gatb	100	65.244	Gadus_morhua
ENSMUSG00000028085	Gatb	89	73.482	ENSGALG00000010097	GATB	91	73.482	Gallus_gallus
ENSMUSG00000028085	Gatb	90	67.366	ENSGAFG00000014422	gatb	94	63.495	Gambusia_affinis
ENSMUSG00000028085	Gatb	86	69.458	ENSGACG00000017143	gatb	99	65.102	Gasterosteus_aculeatus
ENSMUSG00000028085	Gatb	99	70.190	ENSGAGG00000007826	GATB	99	68.515	Gopherus_agassizii
ENSMUSG00000028085	Gatb	99	87.021	ENSGGOG00000011099	GATB	100	85.278	Gorilla_gorilla
ENSMUSG00000028085	Gatb	93	68.636	ENSHBUG00000009656	gatb	94	65.511	Haplochromis_burtoni
ENSMUSG00000028085	Gatb	99	84.501	ENSHGLG00000001316	GATB	100	84.322	Heterocephalus_glaber_female
ENSMUSG00000028085	Gatb	100	84.322	ENSHGLG00100004289	GATB	100	84.322	Heterocephalus_glaber_male
ENSMUSG00000028085	Gatb	87	69.024	ENSHCOG00000006270	gatb	90	64.588	Hippocampus_comes
ENSMUSG00000028085	Gatb	92	67.206	ENSIPUG00000013560	gatb	94	63.269	Ictalurus_punctatus
ENSMUSG00000028085	Gatb	99	85.745	ENSSTOG00000005689	GATB	100	84.201	Ictidomys_tridecemlineatus
ENSMUSG00000028085	Gatb	99	86.170	ENSJJAG00000016979	Gatb	99	86.170	Jaculus_jaculus
ENSMUSG00000028085	Gatb	92	69.178	ENSKMAG00000004727	gatb	96	65.267	Kryptolebias_marmoratus
ENSMUSG00000028085	Gatb	89	69.194	ENSLBEG00000019511	gatb	93	64.961	Labrus_bergylta
ENSMUSG00000028085	Gatb	89	63.380	ENSLACG00000004352	GATB	97	63.052	Latimeria_chalumnae
ENSMUSG00000028085	Gatb	86	63.747	ENSLOCG00000008564	gatb	89	60.241	Lepisosteus_oculatus
ENSMUSG00000028085	Gatb	99	84.043	ENSLAFG00000022607	GATB	99	82.914	Loxodonta_africana
ENSMUSG00000028085	Gatb	99	86.809	ENSMMUG00000011048	GATB	99	84.892	Macaca_mulatta
ENSMUSG00000028085	Gatb	99	87.021	ENSMNEG00000040147	GATB	99	85.072	Macaca_nemestrina
ENSMUSG00000028085	Gatb	99	86.383	ENSMLEG00000042135	GATB	99	84.173	Mandrillus_leucophaeus
ENSMUSG00000028085	Gatb	91	68.822	ENSMAMG00000013256	gatb	95	64.547	Mastacembelus_armatus
ENSMUSG00000028085	Gatb	93	68.864	ENSMZEG00005008495	gatb	96	65.209	Maylandia_zebra
ENSMUSG00000028085	Gatb	89	74.494	ENSMGAG00000004276	GATB	98	74.494	Meleagris_gallopavo
ENSMUSG00000028085	Gatb	100	91.102	ENSMAUG00000019099	Gatb	100	91.102	Mesocricetus_auratus
ENSMUSG00000028085	Gatb	99	87.234	ENSMICG00000004311	GATB	99	85.791	Microcebus_murinus
ENSMUSG00000028085	Gatb	100	92.373	ENSMOCG00000017566	Gatb	100	92.373	Microtus_ochrogaster
ENSMUSG00000028085	Gatb	87	58.881	ENSMMOG00000005376	gatb	87	56.338	Mola_mola
ENSMUSG00000028085	Gatb	99	76.744	ENSMODG00000001031	GATB	99	74.014	Monodelphis_domestica
ENSMUSG00000028085	Gatb	90	69.176	ENSMALG00000003418	gatb	91	67.308	Monopterus_albus
ENSMUSG00000028085	Gatb	100	98.553	MGP_CAROLIEiJ_G0025120	Gatb	100	98.553	Mus_caroli
ENSMUSG00000028085	Gatb	100	97.034	MGP_PahariEiJ_G0026563	Gatb	100	97.034	Mus_pahari
ENSMUSG00000028085	Gatb	100	99.461	MGP_SPRETEiJ_G0026062	Gatb	100	99.461	Mus_spretus
ENSMUSG00000028085	Gatb	99	84.681	ENSMPUG00000007394	GATB	99	83.633	Mustela_putorius_furo
ENSMUSG00000028085	Gatb	99	85.532	ENSMLUG00000008194	GATB	99	83.633	Myotis_lucifugus
ENSMUSG00000028085	Gatb	100	87.076	ENSNGAG00000002152	Gatb	100	87.076	Nannospalax_galili
ENSMUSG00000028085	Gatb	74	70.085	ENSNBRG00000005947	gatb	100	65.148	Neolamprologus_brichardi
ENSMUSG00000028085	Gatb	99	87.021	ENSNLEG00000005836	GATB	100	84.919	Nomascus_leucogenys
ENSMUSG00000028085	Gatb	87	80.976	ENSMEUG00000001479	GATB	99	77.374	Notamacropus_eugenii
ENSMUSG00000028085	Gatb	99	84.043	ENSOPRG00000011496	GATB	99	82.944	Ochotona_princeps
ENSMUSG00000028085	Gatb	100	85.169	ENSODEG00000005429	GATB	100	85.169	Octodon_degus
ENSMUSG00000028085	Gatb	93	68.636	ENSONIG00000010059	gatb	96	64.829	Oreochromis_niloticus
ENSMUSG00000028085	Gatb	74	81.143	ENSOANG00000005282	GATB	99	75.632	Ornithorhynchus_anatinus
ENSMUSG00000028085	Gatb	99	84.043	ENSOCUG00000016875	GATB	99	82.374	Oryctolagus_cuniculus
ENSMUSG00000028085	Gatb	87	66.667	ENSORLG00000007740	gatb	99	64.097	Oryzias_latipes
ENSMUSG00000028085	Gatb	91	66.897	ENSORLG00020016385	gatb	94	64.286	Oryzias_latipes_hni
ENSMUSG00000028085	Gatb	93	65.682	ENSOMEG00000003089	gatb	95	63.340	Oryzias_melastigma
ENSMUSG00000028085	Gatb	99	84.043	ENSOGAG00000014181	GATB	99	82.914	Otolemur_garnettii
ENSMUSG00000028085	Gatb	99	84.894	ENSOARG00000004355	GATB	99	81.574	Ovis_aries
ENSMUSG00000028085	Gatb	99	87.021	ENSPPAG00000041690	GATB	100	85.458	Pan_paniscus
ENSMUSG00000028085	Gatb	99	84.468	ENSPPRG00000004993	GATB	99	82.014	Panthera_pardus
ENSMUSG00000028085	Gatb	99	84.894	ENSPTIG00000021433	GATB	99	82.554	Panthera_tigris_altaica
ENSMUSG00000028085	Gatb	100	81.329	ENSPTRG00000016513	GATB	100	81.329	Pan_troglodytes
ENSMUSG00000028085	Gatb	99	83.191	ENSPANG00000024036	GATB	99	81.835	Papio_anubis
ENSMUSG00000028085	Gatb	88	69.544	ENSPKIG00000017076	gatb	96	65.927	Paramormyrops_kingsleyae
ENSMUSG00000028085	Gatb	97	69.935	ENSPSIG00000017832	GATB	98	67.523	Pelodiscus_sinensis
ENSMUSG00000028085	Gatb	87	59.367	ENSPMGG00000016497	gatb	89	56.539	Periophthalmus_magnuspinnatus
ENSMUSG00000028085	Gatb	100	92.585	ENSPEMG00000011096	Gatb	100	92.585	Peromyscus_maniculatus_bairdii
ENSMUSG00000028085	Gatb	99	77.021	ENSPCIG00000015213	GATB	99	74.054	Phascolarctos_cinereus
ENSMUSG00000028085	Gatb	87	70.290	ENSPFOG00000009933	gatb	91	66.000	Poecilia_formosa
ENSMUSG00000028085	Gatb	87	71.046	ENSPLAG00000015569	gatb	94	64.789	Poecilia_latipinna
ENSMUSG00000028085	Gatb	87	70.073	ENSPMEG00000006100	gatb	94	63.984	Poecilia_mexicana
ENSMUSG00000028085	Gatb	87	69.586	ENSPREG00000000128	gatb	94	63.454	Poecilia_reticulata
ENSMUSG00000028085	Gatb	99	87.234	ENSPPYG00000015121	GATB	100	85.099	Pongo_abelii
ENSMUSG00000028085	Gatb	100	63.734	ENSPCAG00000005950	GATB	100	63.734	Procavia_capensis
ENSMUSG00000028085	Gatb	96	88.791	ENSPCOG00000021777	GATB	98	86.876	Propithecus_coquereli
ENSMUSG00000028085	Gatb	99	84.468	ENSPVAG00000006891	GATB	99	82.914	Pteropus_vampyrus
ENSMUSG00000028085	Gatb	93	68.864	ENSPNYG00000013884	gatb	96	65.209	Pundamilia_nyererei
ENSMUSG00000028085	Gatb	86	68.966	ENSPNAG00000020150	gatb	89	64.097	Pygocentrus_nattereri
ENSMUSG00000028085	Gatb	100	93.537	ENSRNOG00000037655	Gatb	100	93.537	Rattus_norvegicus
ENSMUSG00000028085	Gatb	99	86.596	ENSRBIG00000006453	GATB	99	84.532	Rhinopithecus_bieti
ENSMUSG00000028085	Gatb	99	86.596	ENSRROG00000041575	GATB	99	84.532	Rhinopithecus_roxellana
ENSMUSG00000028085	Gatb	91	32.314	YBL080C	-	91	30.769	Saccharomyces_cerevisiae
ENSMUSG00000028085	Gatb	99	85.957	ENSSBOG00000022495	GATB	99	83.813	Saimiri_boliviensis_boliviensis
ENSMUSG00000028085	Gatb	99	76.383	ENSSHAG00000011763	GATB	99	74.054	Sarcophilus_harrisii
ENSMUSG00000028085	Gatb	90	70.093	ENSSFOG00015015565	gatb	93	66.408	Scleropages_formosus
ENSMUSG00000028085	Gatb	99	63.843	ENSSMAG00000003609	gatb	79	60.877	Scophthalmus_maximus
ENSMUSG00000028085	Gatb	88	70.024	ENSSDUG00000019847	gatb	91	65.538	Seriola_dumerili
ENSMUSG00000028085	Gatb	87	70.803	ENSSLDG00000010253	gatb	95	66.465	Seriola_lalandi_dorsalis
ENSMUSG00000028085	Gatb	76	70.149	ENSSARG00000003212	GATB	76	70.149	Sorex_araneus
ENSMUSG00000028085	Gatb	86	76.716	ENSSPUG00000014453	GATB	96	73.631	Sphenodon_punctatus
ENSMUSG00000028085	Gatb	87	71.533	ENSSPAG00000014465	gatb	99	66.801	Stegastes_partitus
ENSMUSG00000028085	Gatb	99	84.255	ENSSSCG00000009015	GATB	99	83.486	Sus_scrofa
ENSMUSG00000028085	Gatb	86	77.941	ENSTGUG00000004986	GATB	99	74.291	Taeniopygia_guttata
ENSMUSG00000028085	Gatb	86	63.614	ENSTRUG00000015238	gatb	92	59.566	Takifugu_rubripes
ENSMUSG00000028085	Gatb	68	66.769	ENSTNIG00000003378	gatb	100	61.557	Tetraodon_nigroviridis
ENSMUSG00000028085	Gatb	87	62.864	ENSTBEG00000009804	GATB	88	62.731	Tupaia_belangeri
ENSMUSG00000028085	Gatb	99	83.830	ENSTTRG00000010679	GATB	99	81.655	Tursiops_truncatus
ENSMUSG00000028085	Gatb	99	86.170	ENSUAMG00000021441	GATB	99	83.813	Ursus_americanus
ENSMUSG00000028085	Gatb	99	86.170	ENSUMAG00000016157	GATB	99	83.453	Ursus_maritimus
ENSMUSG00000028085	Gatb	76	92.308	ENSVPAG00000010844	GATB	80	75.224	Vicugna_pacos
ENSMUSG00000028085	Gatb	99	84.255	ENSVVUG00000025083	GATB	99	81.655	Vulpes_vulpes
ENSMUSG00000028085	Gatb	85	74.627	ENSXETG00000034167	GATB	98	70.243	Xenopus_tropicalis
ENSMUSG00000028085	Gatb	95	64.143	ENSXMAG00000008071	gatb	92	76.074	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	24579914.	IDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006412	translation	-	IEA	Process
GO:0016874	ligase activity	-	IEA	Function
GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	-	IEA	Function
GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex	21873635.	IBA	Component
GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex	-	ISO	Component
GO:0032543	mitochondrial translation	21873635.	IBA	Process
GO:0032543	mitochondrial translation	-	ISO	Process
GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	21873635.	IBA	Function
GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	-	ISO	Function
GO:0070681	glutaminyl-tRNAGln biosynthesis via transamidation	21873635.	IBA	Process
GO:0070681	glutaminyl-tRNAGln biosynthesis via transamidation	-	ISO	Process