EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028104 (Gene tree)
Gene ID: 69870
Gene Symbol: Polr3gl
Alias: 2010003I19Rik
Full Name: polymerase (RNA) III (DNA directed) polypeptide G like
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 16310 bases
Position: chr3:96577872-96594181
Accession: 1917120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000089544	RNA_pol_3_Rpc31	PF11705.8	5.8e-38	1	1
ENSMUSP00000118943	RNA_pol_3_Rpc31	PF11705.8	8.9e-19	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000091924	-	1427	-	ENSMUSP00000089544	218 (aa)	-	Q8R0C0
ENSMUST00000131641	-	647	-	-	- (aa)	-	-
ENSMUST00000145001	-	607	-	ENSMUSP00000118943	148 (aa)	-	D3YXS1
ENSMUST00000141579	-	545	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028104's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03020	RNA polymerase	KEGG
mmu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000028104	Polr3gl	98	48.899	ENSMUSG00000035834	Polr3g	95	46.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028104	Polr3gl	100	96.789	ENSMOCG00000001317	Polr3gl	100	96.789	Microtus_ochrogaster
ENSMUSG00000028104	Polr3gl	100	100.000	MGP_CAROLIEiJ_G0025380	Polr3gl	100	100.000	Mus_caroli
ENSMUSG00000028104	Polr3gl	100	99.541	MGP_PahariEiJ_G0026825	Polr3gl	100	99.541	Mus_pahari
ENSMUSG00000028104	Polr3gl	100	100.000	MGP_SPRETEiJ_G0026327	Polr3gl	100	100.000	Mus_spretus
ENSMUSG00000028104	Polr3gl	99	96.774	ENSPEMG00000014489	Polr3gl	100	96.774	Peromyscus_maniculatus_bairdii
ENSMUSG00000028104	Polr3gl	100	99.541	ENSRNOG00000021209	Polr3gl	100	99.541	Rattus_norvegicus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0000790	nuclear chromatin	24107381.	IDA	Component
GO:0000790	nuclear chromatin	24107381.	ISO	Component
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005666	RNA polymerase III complex	24107381.	ISO	Component
GO:0006383	transcription by RNA polymerase III	-	ISO	Process