EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028106 (Gene tree)
Gene ID: 75137
Gene Symbol: Rprd2
Alias: 2810036A19Rik|4930535B03Rik|6720469I21Rik
Full Name: regulation of nuclear pre-mRNA domain containing 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 58523
Position: chr3: 95760341-95818863
Accession: 1922387
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000197449	-	3298	-	ENSMUSP00000143240	473 (aa)	-	A0A0G2JFN1
ENSMUST00000198740	-	2167	-	-	- (aa)	-	-
ENSMUST00000200428	-	589	-	-	- (aa)	-	-
ENSMUST00000198741	-	1052	-	-	- (aa)	-	-
ENSMUST00000200164	-	7498	XM_006502228	ENSMUSP00000143333	1386 (aa)	XP_006502291	A0A0G2JFW6
ENSMUST00000090791	-	7756	XM_006502227	ENSMUSP00000088297	1469 (aa)	XP_006502290	Q6NXI6

Gene Model

Click here to download ENSMUSG00000028106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028106's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028106	Rprd2	99	90.258	ENSG00000163125	RPRD2	96	97.945	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000993	RNA polymerase II complex binding	21873635.	IBA	Function
GO:0016591	RNA polymerase II, holoenzyme	21873635.	IBA	Component
GO:0016591	RNA polymerase II, holoenzyme	-	ISO	Component
GO:0031124	mRNA 3'-end processing	21873635.	IBA	Process