EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028140 (Gene tree)
Gene ID: 78523
Gene Symbol: Mrpl9
Alias: 8030480E20Rik|C330013D18Rik
Full Name: mitochondrial ribosomal protein L9
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 7813 bases
Position: chr3:94443318-94451130
Accession: 2137211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000029786	Ribosomal_L9_N	PF01281.19	1.4e-13	1	1
ENSMUSP00000142859	Ribosomal_L9_N	PF01281.19	1.6e-13	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000029786	-	1612	XM_006502322	ENSMUSP00000029786	265 (aa)	XP_006502385	Q99N94
ENSMUST00000196143	-	1657	-	ENSMUSP00000142859	268 (aa)	-	Q3UK02
ENSMUST00000199009	-	716	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028140's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028140's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028140	Mrpl9	99	82.022	ENSG00000143436	MRPL9	97	88.095	Homo_sapiens
ENSMUSG00000028140	Mrpl9	75	57.214	ENSAPOG00000000834	mrpl9	70	57.214	Acanthochromis_polyacanthus
ENSMUSG00000028140	Mrpl9	97	80.233	ENSAMEG00000000491	MRPL9	97	80.233	Ailuropoda_melanoleuca
ENSMUSG00000028140	Mrpl9	68	55.556	ENSACIG00000002519	mrpl9	79	54.945	Amphilophus_citrinellus
ENSMUSG00000028140	Mrpl9	83	55.405	ENSAOCG00000020766	mrpl9	75	55.405	Amphiprion_ocellaris
ENSMUSG00000028140	Mrpl9	83	55.405	ENSAPEG00000007650	mrpl9	76	55.405	Amphiprion_percula
ENSMUSG00000028140	Mrpl9	85	54.185	ENSATEG00000010505	mrpl9	73	54.185	Anabas_testudineus
ENSMUSG00000028140	Mrpl9	100	81.041	ENSANAG00000022559	MRPL9	100	81.041	Aotus_nancymaae
ENSMUSG00000028140	Mrpl9	78	58.654	ENSACLG00000010920	mrpl9	78	55.310	Astatotilapia_calliptera
ENSMUSG00000028140	Mrpl9	86	54.783	ENSAMXG00000041268	mrpl9	92	54.783	Astyanax_mexicanus
ENSMUSG00000028140	Mrpl9	76	83.981	ENSBTAG00000000797	MRPL9	89	83.981	Bos_taurus
ENSMUSG00000028140	Mrpl9	100	81.784	ENSCJAG00000007926	MRPL9	100	81.784	Callithrix_jacchus
ENSMUSG00000028140	Mrpl9	98	69.057	ENSCAFG00020015940	-	95	69.057	Canis_lupus_dingo
ENSMUSG00000028140	Mrpl9	91	86.992	ENSCAFG00020009687	-	79	79.787	Canis_lupus_dingo
ENSMUSG00000028140	Mrpl9	98	81.887	ENSCHIG00000011797	MRPL9	99	81.887	Capra_hircus
ENSMUSG00000028140	Mrpl9	94	84.127	ENSTSYG00000006296	MRPL9	99	82.576	Carlito_syrichta
ENSMUSG00000028140	Mrpl9	99	78.788	ENSCPOG00000021168	MRPL9	97	78.788	Cavia_porcellus
ENSMUSG00000028140	Mrpl9	84	83.700	ENSCCAG00000021688	MRPL9	99	83.700	Cebus_capucinus
ENSMUSG00000028140	Mrpl9	99	81.648	ENSCATG00000043909	MRPL9	99	81.648	Cercocebus_atys
ENSMUSG00000028140	Mrpl9	100	79.026	ENSCLAG00000000458	MRPL9	100	79.026	Chinchilla_lanigera
ENSMUSG00000028140	Mrpl9	85	80.176	ENSCSAG00000001816	MRPL9	82	80.176	Chlorocebus_sabaeus
ENSMUSG00000028140	Mrpl9	60	77.640	ENSCHOG00000007166	-	100	77.640	Choloepus_hoffmanni
ENSMUSG00000028140	Mrpl9	83	79.372	ENSCHOG00000000258	-	100	79.372	Choloepus_hoffmanni
ENSMUSG00000028140	Mrpl9	85	74.009	ENSCPBG00000008844	MRPL9	88	74.009	Chrysemys_picta_bellii
ENSMUSG00000028140	Mrpl9	99	81.818	ENSCANG00000037263	MRPL9	99	81.818	Colobus_angolensis_palliatus
ENSMUSG00000028140	Mrpl9	100	89.434	ENSCGRG00001017649	Mrpl9	100	89.434	Cricetulus_griseus_chok1gshd
ENSMUSG00000028140	Mrpl9	88	80.508	ENSCGRG00000007695	Mrpl9	100	80.508	Cricetulus_griseus_crigri
ENSMUSG00000028140	Mrpl9	75	53.960	ENSCSEG00000006967	mrpl9	66	53.960	Cynoglossus_semilaevis
ENSMUSG00000028140	Mrpl9	74	57.576	ENSCVAG00000013421	mrpl9	69	57.576	Cyprinodon_variegatus
ENSMUSG00000028140	Mrpl9	76	56.863	ENSDARG00000063249	mrpl9	82	56.863	Danio_rerio
ENSMUSG00000028140	Mrpl9	79	56.808	ENSDNOG00000033935	-	98	56.808	Dasypus_novemcinctus
ENSMUSG00000028140	Mrpl9	100	81.273	ENSDNOG00000011403	-	100	81.273	Dasypus_novemcinctus
ENSMUSG00000028140	Mrpl9	99	80.608	ENSDORG00000015320	Mrpl9	99	80.608	Dipodomys_ordii
ENSMUSG00000028140	Mrpl9	95	77.647	ENSETEG00000016013	MRPL9	99	77.647	Echinops_telfairi
ENSMUSG00000028140	Mrpl9	97	84.496	ENSEASG00005005246	MRPL9	100	83.521	Equus_asinus_asinus
ENSMUSG00000028140	Mrpl9	97	84.109	ENSECAG00000016263	MRPL9	100	83.146	Equus_caballus
ENSMUSG00000028140	Mrpl9	88	52.119	ENSELUG00000014367	mrpl9	98	46.154	Esox_lucius
ENSMUSG00000028140	Mrpl9	94	79.762	ENSFCAG00000043355	MRPL9	98	79.762	Felis_catus
ENSMUSG00000028140	Mrpl9	93	80.081	ENSFDAG00000008439	MRPL9	100	80.081	Fukomys_damarensis
ENSMUSG00000028140	Mrpl9	81	53.241	ENSFHEG00000010344	mrpl9	75	53.241	Fundulus_heteroclitus
ENSMUSG00000028140	Mrpl9	75	58.209	ENSGMOG00000016956	mrpl9	84	58.209	Gadus_morhua
ENSMUSG00000028140	Mrpl9	79	72.038	ENSGALG00000042941	MRPL9	89	72.350	Gallus_gallus
ENSMUSG00000028140	Mrpl9	85	53.744	ENSGAFG00000006437	mrpl9	78	53.744	Gambusia_affinis
ENSMUSG00000028140	Mrpl9	84	53.333	ENSGACG00000004192	mrpl9	93	53.333	Gasterosteus_aculeatus
ENSMUSG00000028140	Mrpl9	67	73.596	ENSGAGG00000019667	MRPL9	67	73.596	Gopherus_agassizii
ENSMUSG00000028140	Mrpl9	99	82.397	ENSGGOG00000001902	MRPL9	99	82.397	Gorilla_gorilla
ENSMUSG00000028140	Mrpl9	78	58.654	ENSHBUG00000021568	mrpl9	78	55.310	Haplochromis_burtoni
ENSMUSG00000028140	Mrpl9	94	80.400	ENSHGLG00000004827	MRPL9	96	80.400	Heterocephalus_glaber_female
ENSMUSG00000028140	Mrpl9	94	80.000	ENSHGLG00100009279	MRPL9	96	80.000	Heterocephalus_glaber_male
ENSMUSG00000028140	Mrpl9	82	56.054	ENSHCOG00000020724	mrpl9	85	56.054	Hippocampus_comes
ENSMUSG00000028140	Mrpl9	86	55.365	ENSIPUG00000011538	mrpl9	94	55.365	Ictalurus_punctatus
ENSMUSG00000028140	Mrpl9	85	76.889	ENSSTOG00000020141	-	89	76.889	Ictidomys_tridecemlineatus
ENSMUSG00000028140	Mrpl9	85	52.838	ENSKMAG00000010267	mrpl9	87	52.838	Kryptolebias_marmoratus
ENSMUSG00000028140	Mrpl9	80	55.814	ENSLBEG00000025373	mrpl9	71	55.814	Labrus_bergylta
ENSMUSG00000028140	Mrpl9	70	50.532	ENSLBEG00000019811	mrpl9	87	50.532	Labrus_bergylta
ENSMUSG00000028140	Mrpl9	85	58.590	ENSLACG00000002611	MRPL9	92	58.590	Latimeria_chalumnae
ENSMUSG00000028140	Mrpl9	99	80.451	ENSLAFG00000006271	-	99	80.451	Loxodonta_africana
ENSMUSG00000028140	Mrpl9	80	75.355	ENSLAFG00000028346	-	97	75.355	Loxodonta_africana
ENSMUSG00000028140	Mrpl9	99	82.772	ENSMFAG00000000874	MRPL9	99	82.772	Macaca_fascicularis
ENSMUSG00000028140	Mrpl9	99	82.772	ENSMMUG00000009094	MRPL9	99	82.772	Macaca_mulatta
ENSMUSG00000028140	Mrpl9	99	82.772	ENSMNEG00000020504	MRPL9	99	82.772	Macaca_nemestrina
ENSMUSG00000028140	Mrpl9	99	82.397	ENSMLEG00000043239	MRPL9	99	82.397	Mandrillus_leucophaeus
ENSMUSG00000028140	Mrpl9	74	58.376	ENSMAMG00000016085	mrpl9	65	58.376	Mastacembelus_armatus
ENSMUSG00000028140	Mrpl9	78	58.654	ENSMZEG00005026632	mrpl9	78	55.310	Maylandia_zebra
ENSMUSG00000028140	Mrpl9	55	74.830	ENSMGAG00000003256	MRPL9	94	75.163	Meleagris_gallopavo
ENSMUSG00000028140	Mrpl9	100	89.434	ENSMAUG00000019833	Mrpl9	100	89.434	Mesocricetus_auratus
ENSMUSG00000028140	Mrpl9	99	80.224	ENSMICG00000010669	MRPL9	99	80.224	Microcebus_murinus
ENSMUSG00000028140	Mrpl9	99	90.152	ENSMOCG00000002992	Mrpl9	99	90.152	Microtus_ochrogaster
ENSMUSG00000028140	Mrpl9	78	55.024	ENSMMOG00000017931	mrpl9	84	54.774	Mola_mola
ENSMUSG00000028140	Mrpl9	83	56.054	ENSMALG00000008112	mrpl9	73	56.054	Monopterus_albus
ENSMUSG00000028140	Mrpl9	100	98.491	MGP_CAROLIEiJ_G0025312	Mrpl9	100	98.491	Mus_caroli
ENSMUSG00000028140	Mrpl9	100	95.472	MGP_PahariEiJ_G0026755	Mrpl9	100	95.472	Mus_pahari
ENSMUSG00000028140	Mrpl9	100	98.507	MGP_SPRETEiJ_G0026254	Mrpl9	100	98.507	Mus_spretus
ENSMUSG00000028140	Mrpl9	91	82.716	ENSMPUG00000003590	MRPL9	98	81.818	Mustela_putorius_furo
ENSMUSG00000028140	Mrpl9	100	76.838	ENSMLUG00000002204	MRPL9	100	76.838	Myotis_lucifugus
ENSMUSG00000028140	Mrpl9	98	78.229	ENSNGAG00000010578	Mrpl9	99	83.396	Nannospalax_galili
ENSMUSG00000028140	Mrpl9	78	57.212	ENSNBRG00000015276	mrpl9	78	53.982	Neolamprologus_brichardi
ENSMUSG00000028140	Mrpl9	99	82.397	ENSNLEG00000010275	MRPL9	99	82.397	Nomascus_leucogenys
ENSMUSG00000028140	Mrpl9	88	74.786	ENSMEUG00000006109	MRPL9	91	74.786	Notamacropus_eugenii
ENSMUSG00000028140	Mrpl9	96	74.803	ENSOPRG00000016025	MRPL9	97	74.031	Ochotona_princeps
ENSMUSG00000028140	Mrpl9	100	78.652	ENSODEG00000010962	MRPL9	100	78.652	Octodon_degus
ENSMUSG00000028140	Mrpl9	78	58.654	ENSONIG00000019778	mrpl9	78	55.310	Oreochromis_niloticus
ENSMUSG00000028140	Mrpl9	99	80.451	ENSOCUG00000001383	MRPL9	99	80.451	Oryctolagus_cuniculus
ENSMUSG00000028140	Mrpl9	82	54.587	ENSORLG00000026444	mrpl9	81	54.587	Oryzias_latipes
ENSMUSG00000028140	Mrpl9	82	54.128	ENSORLG00015009701	mrpl9	86	53.960	Oryzias_latipes_hsok
ENSMUSG00000028140	Mrpl9	82	55.251	ENSOMEG00000005486	mrpl9	82	55.251	Oryzias_melastigma
ENSMUSG00000028140	Mrpl9	96	75.000	ENSOGAG00000030456	-	99	73.864	Otolemur_garnettii
ENSMUSG00000028140	Mrpl9	99	81.887	ENSOGAG00000001834	-	99	81.887	Otolemur_garnettii
ENSMUSG00000028140	Mrpl9	92	85.772	ENSOARG00000021042	MRPL9	92	85.772	Ovis_aries
ENSMUSG00000028140	Mrpl9	99	81.648	ENSPPAG00000016172	MRPL9	99	81.648	Pan_paniscus
ENSMUSG00000028140	Mrpl9	94	78.968	ENSPPRG00000003556	MRPL9	98	78.968	Panthera_pardus
ENSMUSG00000028140	Mrpl9	92	77.959	ENSPTIG00000017020	MRPL9	92	77.959	Panthera_tigris_altaica
ENSMUSG00000028140	Mrpl9	99	81.648	ENSPTRG00000001295	MRPL9	99	81.648	Pan_troglodytes
ENSMUSG00000028140	Mrpl9	99	81.648	ENSPANG00000008737	MRPL9	99	81.648	Papio_anubis
ENSMUSG00000028140	Mrpl9	90	55.000	ENSPKIG00000021327	mrpl9	96	55.000	Paramormyrops_kingsleyae
ENSMUSG00000028140	Mrpl9	76	78.325	ENSPSIG00000007207	MRPL9	99	77.358	Pelodiscus_sinensis
ENSMUSG00000028140	Mrpl9	74	56.784	ENSPMGG00000021557	mrpl9	80	56.784	Periophthalmus_magnuspinnatus
ENSMUSG00000028140	Mrpl9	100	88.302	ENSPEMG00000011374	Mrpl9	100	88.302	Peromyscus_maniculatus_bairdii
ENSMUSG00000028140	Mrpl9	86	77.056	ENSPCIG00000021194	-	93	77.974	Phascolarctos_cinereus
ENSMUSG00000028140	Mrpl9	82	73.272	ENSPCIG00000023550	-	83	73.272	Phascolarctos_cinereus
ENSMUSG00000028140	Mrpl9	85	53.744	ENSPFOG00000007514	mrpl9	78	53.744	Poecilia_formosa
ENSMUSG00000028140	Mrpl9	85	53.304	ENSPLAG00000011446	mrpl9	78	53.304	Poecilia_latipinna
ENSMUSG00000028140	Mrpl9	85	53.744	ENSPMEG00000010560	mrpl9	78	53.744	Poecilia_mexicana
ENSMUSG00000028140	Mrpl9	75	54.500	ENSPREG00000012577	mrpl9	68	54.500	Poecilia_reticulata
ENSMUSG00000028140	Mrpl9	99	82.397	ENSPPYG00000000857	MRPL9	99	82.397	Pongo_abelii
ENSMUSG00000028140	Mrpl9	99	80.597	ENSPCOG00000006826	MRPL9	99	80.597	Propithecus_coquereli
ENSMUSG00000028140	Mrpl9	78	59.135	ENSPNYG00000009390	mrpl9	78	55.752	Pundamilia_nyererei
ENSMUSG00000028140	Mrpl9	80	59.535	ENSPNAG00000025239	mrpl9	90	59.535	Pygocentrus_nattereri
ENSMUSG00000028140	Mrpl9	100	90.566	ENSRNOG00000020869	mrpl9	100	90.566	Rattus_norvegicus
ENSMUSG00000028140	Mrpl9	99	82.397	ENSRBIG00000036937	MRPL9	99	82.397	Rhinopithecus_bieti
ENSMUSG00000028140	Mrpl9	99	82.772	ENSRROG00000031111	MRPL9	99	82.772	Rhinopithecus_roxellana
ENSMUSG00000028140	Mrpl9	100	81.784	ENSSBOG00000018541	MRPL9	100	81.784	Saimiri_boliviensis_boliviensis
ENSMUSG00000028140	Mrpl9	85	69.604	ENSSHAG00000015810	MRPL9	88	69.604	Sarcophilus_harrisii
ENSMUSG00000028140	Mrpl9	79	59.906	ENSSFOG00015008036	mrpl9	85	59.091	Scleropages_formosus
ENSMUSG00000028140	Mrpl9	84	54.018	ENSSMAG00000004399	mrpl9	69	54.018	Scophthalmus_maximus
ENSMUSG00000028140	Mrpl9	72	53.807	ENSSDUG00000014433	mrpl9	86	54.082	Seriola_dumerili
ENSMUSG00000028140	Mrpl9	78	54.808	ENSSLDG00000015665	mrpl9	72	52.941	Seriola_lalandi_dorsalis
ENSMUSG00000028140	Mrpl9	78	62.500	ENSSPUG00000002439	MRPL9	90	62.500	Sphenodon_punctatus
ENSMUSG00000028140	Mrpl9	75	55.721	ENSSPAG00000019185	mrpl9	61	55.721	Stegastes_partitus
ENSMUSG00000028140	Mrpl9	96	81.641	ENSSSCG00000028343	MRPL9	99	79.323	Sus_scrofa
ENSMUSG00000028140	Mrpl9	83	54.299	ENSTRUG00000025906	mrpl9	77	54.299	Takifugu_rubripes
ENSMUSG00000028140	Mrpl9	83	52.036	ENSTNIG00000017532	mrpl9	80	52.036	Tetraodon_nigroviridis
ENSMUSG00000028140	Mrpl9	100	82.022	ENSTBEG00000010836	MRPL9	99	82.022	Tupaia_belangeri
ENSMUSG00000028140	Mrpl9	78	86.538	ENSTTRG00000003147	MRPL9	98	86.538	Tursiops_truncatus
ENSMUSG00000028140	Mrpl9	93	83.065	ENSUAMG00000019587	MRPL9	76	80.385	Ursus_americanus
ENSMUSG00000028140	Mrpl9	76	87.624	ENSUMAG00000001723	MRPL9	80	87.624	Ursus_maritimus
ENSMUSG00000028140	Mrpl9	62	84.756	ENSVPAG00000000664	MRPL9	100	84.756	Vicugna_pacos
ENSMUSG00000028140	Mrpl9	89	77.215	ENSVVUG00000013099	MRPL9	93	75.099	Vulpes_vulpes
ENSMUSG00000028140	Mrpl9	78	54.762	ENSXCOG00000019845	mrpl9	91	54.762	Xiphophorus_couchianus
ENSMUSG00000028140	Mrpl9	80	56.075	ENSXMAG00000028983	mrpl9	81	56.075	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process