EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028223 (Gene tree)
Gene ID: 67460
Gene Symbol: Decr1
Alias: 1200012F07Rik|Decr|Nadph
Full Name: 2%2C4-dienoyl CoA reductase 1%2C mitochondrial
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 28268
Position: chr4: 15917240-15945507
Accession: 1914710
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000029877	-	2959	-	ENSMUSP00000029877	335 (aa)	-	Q9CQ62
ENSMUST00000154639	-	700	-	-	- (aa)	-	-
ENSMUST00000150464	-	366	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028223's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028223	Decr1	87	49.835	WBGene00009973	F53C11.3	95	49.835	Caenorhabditis_elegans
ENSMUSG00000028223	Decr1	74	34.524	YNL202W	SPS19	85	34.524	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006629	lipid metabolic process	-	IEA	Process
GO:0006631	fatty acid metabolic process	-	IEA	Process
GO:0006635	fatty acid beta-oxidation	-	ISO	Process
GO:0008670	2,4-dienoyl-CoA reductase (NADPH) activity	-	ISO	Function
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0051289	protein homotetramerization	-	ISO	Process
GO:0055114	oxidation-reduction process	-	IEA	Process
GO:0070402	NADPH binding	-	ISO	Function
GO:0120162	positive regulation of cold-induced thermogenesis	19578400.	IMP	Process