EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028233 (Gene tree)
Gene ID: 116940
Gene Symbol: Tgs1
Alias: D4Ertd800e|Ncoa6ip|Pimt
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 41745 bases
Position: chr4:3574875-3616619
Accession: 2151797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000054112	Methyltransf_15	PF09445.10	8.3e-41	1	1
ENSMUSP00000054112	UPF0020	PF01170.18	2.7e-05	1	1
ENSMUSP00000054112	Met_10	PF02475.16	5.3e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000130514	-	515	-	-	- (aa)	-	-
ENSMUST00000052712	-	4327	XM_006537558	ENSMUSP00000054112	853 (aa)	XP_006537621	Q923W1
ENSMUST00000146315	-	690	-	-	- (aa)	-	-
ENSMUST00000129964	-	544	-	-	- (aa)	-	-
ENSMUST00000132518	-	687	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028233's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028233's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028233	Tgs1	99	73.653	ENSG00000137574	TGS1	99	73.653	Homo_sapiens
ENSMUSG00000028233	Tgs1	65	36.895	ENSAPOG00000004321	-	99	36.409	Acanthochromis_polyacanthus
ENSMUSG00000028233	Tgs1	99	72.066	ENSAMEG00000001781	TGS1	99	72.079	Ailuropoda_melanoleuca
ENSMUSG00000028233	Tgs1	96	37.080	ENSAOCG00000022799	lyn	96	37.442	Amphiprion_ocellaris
ENSMUSG00000028233	Tgs1	75	40.693	ENSAPEG00000019723	TGS1	96	40.810	Amphiprion_percula
ENSMUSG00000028233	Tgs1	91	33.415	ENSATEG00000005927	lyn	91	33.537	Anabas_testudineus
ENSMUSG00000028233	Tgs1	77	48.798	ENSAPLG00000006073	-	100	49.145	Anas_platyrhynchos
ENSMUSG00000028233	Tgs1	98	46.659	ENSACAG00000017988	TGS1	92	47.630	Anolis_carolinensis
ENSMUSG00000028233	Tgs1	99	67.769	ENSANAG00000035525	TGS1	99	68.241	Aotus_nancymaae
ENSMUSG00000028233	Tgs1	97	38.498	ENSACLG00000000261	lyn	98	38.660	Astatotilapia_calliptera
ENSMUSG00000028233	Tgs1	97	38.993	ENSAMXG00000014086	lyn	97	39.529	Astyanax_mexicanus
ENSMUSG00000028233	Tgs1	99	66.280	ENSBTAG00000005898	TGS1	100	66.976	Bos_taurus
ENSMUSG00000028233	Tgs1	99	71.897	ENSCJAG00000016657	TGS1	98	72.131	Callithrix_jacchus
ENSMUSG00000028233	Tgs1	99	70.657	ENSCAFG00000007011	TGS1	99	70.794	Canis_familiaris
ENSMUSG00000028233	Tgs1	99	69.683	ENSCAFG00020015485	TGS1	99	69.825	Canis_lupus_dingo
ENSMUSG00000028233	Tgs1	99	64.557	ENSCHIG00000013976	TGS1	100	65.823	Capra_hircus
ENSMUSG00000028233	Tgs1	99	72.567	ENSTSYG00000000171	TGS1	99	72.567	Carlito_syrichta
ENSMUSG00000028233	Tgs1	95	66.091	ENSCAPG00000013732	TGS1	99	65.968	Cavia_aperea
ENSMUSG00000028233	Tgs1	99	69.330	ENSCPOG00000009713	TGS1	99	69.330	Cavia_porcellus
ENSMUSG00000028233	Tgs1	99	72.780	ENSCCAG00000030476	TGS1	98	72.780	Cebus_capucinus
ENSMUSG00000028233	Tgs1	99	73.068	ENSCATG00000035375	TGS1	99	73.068	Cercocebus_atys
ENSMUSG00000028233	Tgs1	99	70.623	ENSCLAG00000009468	TGS1	99	70.975	Chinchilla_lanigera
ENSMUSG00000028233	Tgs1	92	70.463	ENSCSAG00000014611	TGS1	99	70.463	Chlorocebus_sabaeus
ENSMUSG00000028233	Tgs1	99	67.836	ENSCHOG00000001462	TGS1	99	67.953	Choloepus_hoffmanni
ENSMUSG00000028233	Tgs1	98	51.126	ENSCPBG00000004958	TGS1	99	53.061	Chrysemys_picta_bellii
ENSMUSG00000028233	Tgs1	99	72.834	ENSCANG00000041389	TGS1	99	72.834	Colobus_angolensis_palliatus
ENSMUSG00000028233	Tgs1	100	83.081	ENSCGRG00001019470	Tgs1	100	82.730	Cricetulus_griseus_chok1gshd
ENSMUSG00000028233	Tgs1	100	82.271	ENSCGRG00000008981	Tgs1	100	82.619	Cricetulus_griseus_crigri
ENSMUSG00000028233	Tgs1	97	36.860	ENSDARG00000107511	lyn	99	72.778	Danio_rerio
ENSMUSG00000028233	Tgs1	99	69.042	ENSDNOG00000008353	TGS1	99	68.925	Dasypus_novemcinctus
ENSMUSG00000028233	Tgs1	99	72.813	ENSDORG00000012484	Tgs1	99	72.813	Dipodomys_ordii
ENSMUSG00000028233	Tgs1	80	67.544	ENSETEG00000005126	TGS1	85	67.544	Echinops_telfairi
ENSMUSG00000028233	Tgs1	92	70.854	ENSEASG00005016371	TGS1	95	70.352	Equus_asinus_asinus
ENSMUSG00000028233	Tgs1	99	72.079	ENSECAG00000019399	TGS1	99	71.963	Equus_caballus
ENSMUSG00000028233	Tgs1	69	94.828	ENSEEUG00000001735	TGS1	70	94.828	Erinaceus_europaeus
ENSMUSG00000028233	Tgs1	99	71.093	ENSFCAG00000011478	TGS1	99	71.111	Felis_catus
ENSMUSG00000028233	Tgs1	88	48.199	ENSFALG00000010249	TGS1	99	48.692	Ficedula_albicollis
ENSMUSG00000028233	Tgs1	99	72.824	ENSFDAG00000011405	TGS1	99	72.941	Fukomys_damarensis
ENSMUSG00000028233	Tgs1	97	47.715	ENSGALG00000015340	TGS1	97	48.233	Gallus_gallus
ENSMUSG00000028233	Tgs1	98	51.400	ENSGAGG00000019590	TGS1	99	52.744	Gopherus_agassizii
ENSMUSG00000028233	Tgs1	99	73.770	ENSGGOG00000008624	TGS1	99	73.770	Gorilla_gorilla
ENSMUSG00000028233	Tgs1	68	37.377	ENSHBUG00000003518	lyn	100	37.869	Haplochromis_burtoni
ENSMUSG00000028233	Tgs1	86	81.159	ENSHGLG00000000284	TGS1	98	81.159	Heterocephalus_glaber_female
ENSMUSG00000028233	Tgs1	98	38.657	ENSHCOG00000014161	lyn	99	39.195	Hippocampus_comes
ENSMUSG00000028233	Tgs1	98	38.419	ENSIPUG00000002294	tgs1	99	39.297	Ictalurus_punctatus
ENSMUSG00000028233	Tgs1	99	72.706	ENSSTOG00000009597	TGS1	99	72.706	Ictidomys_tridecemlineatus
ENSMUSG00000028233	Tgs1	99	72.663	ENSJJAG00000016239	Tgs1	100	72.071	Jaculus_jaculus
ENSMUSG00000028233	Tgs1	96	36.787	ENSKMAG00000019371	-	97	37.340	Kryptolebias_marmoratus
ENSMUSG00000028233	Tgs1	98	37.266	ENSLBEG00000027341	-	98	38.256	Labrus_bergylta
ENSMUSG00000028233	Tgs1	98	44.137	ENSLACG00000008074	TGS1	100	43.902	Latimeria_chalumnae
ENSMUSG00000028233	Tgs1	98	39.699	ENSLOCG00000005492	lyn	99	41.404	Lepisosteus_oculatus
ENSMUSG00000028233	Tgs1	99	68.692	ENSLAFG00000015386	TGS1	99	68.692	Loxodonta_africana
ENSMUSG00000028233	Tgs1	99	72.717	ENSMFAG00000029838	TGS1	99	72.951	Macaca_fascicularis
ENSMUSG00000028233	Tgs1	99	72.482	ENSMMUG00000005478	TGS1	99	72.482	Macaca_mulatta
ENSMUSG00000028233	Tgs1	99	72.951	ENSMNEG00000023719	TGS1	99	73.185	Macaca_nemestrina
ENSMUSG00000028233	Tgs1	99	73.185	ENSMLEG00000034807	TGS1	99	73.185	Mandrillus_leucophaeus
ENSMUSG00000028233	Tgs1	97	37.683	ENSMAMG00000009542	TGS1	98	37.950	Mastacembelus_armatus
ENSMUSG00000028233	Tgs1	97	38.498	ENSMZEG00005015681	lyn	98	38.479	Maylandia_zebra
ENSMUSG00000028233	Tgs1	83	47.520	ENSMGAG00000010966	TGS1	99	46.456	Meleagris_gallopavo
ENSMUSG00000028233	Tgs1	100	82.039	ENSMAUG00000009875	Tgs1	100	81.956	Mesocricetus_auratus
ENSMUSG00000028233	Tgs1	99	74.065	ENSMICG00000011199	TGS1	99	73.949	Microcebus_murinus
ENSMUSG00000028233	Tgs1	99	77.934	ENSMOCG00000019560	Tgs1	100	77.817	Microtus_ochrogaster
ENSMUSG00000028233	Tgs1	85	61.208	ENSMODG00000009174	TGS1	98	61.611	Monodelphis_domestica
ENSMUSG00000028233	Tgs1	99	89.931	MGP_CAROLIEiJ_G0025780	-	99	89.931	Mus_caroli
ENSMUSG00000028233	Tgs1	100	97.655	MGP_CAROLIEiJ_G0025779	-	100	97.655	Mus_caroli
ENSMUSG00000028233	Tgs1	99	85.582	MGP_PahariEiJ_G0023902	-	99	85.006	Mus_pahari
ENSMUSG00000028233	Tgs1	99	93.099	MGP_PahariEiJ_G0023901	-	99	92.515	Mus_pahari
ENSMUSG00000028233	Tgs1	100	98.710	MGP_SPRETEiJ_G0026727	-	100	98.710	Mus_spretus
ENSMUSG00000028233	Tgs1	58	97.770	MGP_SPRETEiJ_G0026726	-	98	94.681	Mus_spretus
ENSMUSG00000028233	Tgs1	92	69.018	ENSMPUG00000010475	TGS1	99	69.560	Mustela_putorius_furo
ENSMUSG00000028233	Tgs1	99	68.889	ENSMLUG00000014857	TGS1	99	68.889	Myotis_lucifugus
ENSMUSG00000028233	Tgs1	99	75.822	ENSNGAG00000019532	Tgs1	99	76.408	Nannospalax_galili
ENSMUSG00000028233	Tgs1	99	73.185	ENSNLEG00000001101	TGS1	99	73.185	Nomascus_leucogenys
ENSMUSG00000028233	Tgs1	92	58.616	ENSMEUG00000001697	TGS1	99	59.119	Notamacropus_eugenii
ENSMUSG00000028233	Tgs1	90	64.119	ENSODEG00000002948	TGS1	100	64.119	Octodon_degus
ENSMUSG00000028233	Tgs1	50	49.655	ENSONIG00000006339	lyn	97	39.863	Oreochromis_niloticus
ENSMUSG00000028233	Tgs1	88	58.387	ENSOANG00000021853	TGS1	98	58.387	Ornithorhynchus_anatinus
ENSMUSG00000028233	Tgs1	99	71.981	ENSOCUG00000017522	TGS1	99	72.216	Oryctolagus_cuniculus
ENSMUSG00000028233	Tgs1	99	71.478	ENSOGAG00000012572	TGS1	99	71.478	Otolemur_garnettii
ENSMUSG00000028233	Tgs1	99	65.704	ENSOARG00000014613	TGS1	100	66.282	Ovis_aries
ENSMUSG00000028233	Tgs1	99	73.653	ENSPPAG00000039058	TGS1	99	73.653	Pan_paniscus
ENSMUSG00000028233	Tgs1	99	70.388	ENSPPRG00000000677	TGS1	99	70.292	Panthera_pardus
ENSMUSG00000028233	Tgs1	99	70.623	ENSPTIG00000005122	TGS1	99	70.526	Panthera_tigris_altaica
ENSMUSG00000028233	Tgs1	99	73.536	ENSPTRG00000020262	TGS1	99	73.536	Pan_troglodytes
ENSMUSG00000028233	Tgs1	99	72.834	ENSPANG00000018910	TGS1	99	72.834	Papio_anubis
ENSMUSG00000028233	Tgs1	76	41.780	ENSPKIG00000005454	lyn	68	42.640	Paramormyrops_kingsleyae
ENSMUSG00000028233	Tgs1	98	50.889	ENSPSIG00000014983	TGS1	99	52.386	Pelodiscus_sinensis
ENSMUSG00000028233	Tgs1	100	81.585	ENSPEMG00000007957	Tgs1	100	81.649	Peromyscus_maniculatus_bairdii
ENSMUSG00000028233	Tgs1	99	61.234	ENSPCIG00000016232	TGS1	98	61.700	Phascolarctos_cinereus
ENSMUSG00000028233	Tgs1	75	39.150	ENSPFOG00000001545	-	99	38.998	Poecilia_formosa
ENSMUSG00000028233	Tgs1	91	34.761	ENSPREG00000012261	-	99	34.517	Poecilia_reticulata
ENSMUSG00000028233	Tgs1	99	73.536	ENSPPYG00000018597	TGS1	99	73.419	Pongo_abelii
ENSMUSG00000028233	Tgs1	99	66.745	ENSPCAG00000000143	TGS1	99	66.627	Procavia_capensis
ENSMUSG00000028233	Tgs1	99	73.450	ENSPCOG00000013537	TGS1	99	73.333	Propithecus_coquereli
ENSMUSG00000028233	Tgs1	99	65.922	ENSPVAG00000016399	TGS1	99	65.922	Pteropus_vampyrus
ENSMUSG00000028233	Tgs1	75	42.515	ENSPNYG00000023004	lyn	87	39.313	Pundamilia_nyererei
ENSMUSG00000028233	Tgs1	96	38.543	ENSPNAG00000022249	lyn	97	39.813	Pygocentrus_nattereri
ENSMUSG00000028233	Tgs1	99	88.298	ENSRNOG00000008156	Tgs1	99	87.707	Rattus_norvegicus
ENSMUSG00000028233	Tgs1	99	70.843	ENSRBIG00000041893	TGS1	99	70.960	Rhinopithecus_bieti
ENSMUSG00000028233	Tgs1	99	72.834	ENSRROG00000035127	TGS1	99	72.834	Rhinopithecus_roxellana
ENSMUSG00000028233	Tgs1	95	71.917	ENSSBOG00000024469	TGS1	99	71.795	Saimiri_boliviensis_boliviensis
ENSMUSG00000028233	Tgs1	99	59.397	ENSSHAG00000012878	TGS1	98	60.093	Sarcophilus_harrisii
ENSMUSG00000028233	Tgs1	96	37.586	ENSSFOG00015001308	tgs1	97	38.799	Scleropages_formosus
ENSMUSG00000028233	Tgs1	96	37.326	ENSSMAG00000019469	lyn	96	38.249	Scophthalmus_maximus
ENSMUSG00000028233	Tgs1	89	63.648	ENSSSCG00000006251	TGS1	98	64.036	Sus_scrofa
ENSMUSG00000028233	Tgs1	96	50.784	ENSTGUG00000011050	TGS1	100	50.484	Taeniopygia_guttata
ENSMUSG00000028233	Tgs1	53	67.442	ENSTRUG00000009532	lyn	66	67.442	Takifugu_rubripes
ENSMUSG00000028233	Tgs1	88	37.312	ENSTNIG00000018133	lyn	99	38.143	Tetraodon_nigroviridis
ENSMUSG00000028233	Tgs1	84	98.276	ENSTBEG00000010953	TGS1	85	98.276	Tupaia_belangeri
ENSMUSG00000028233	Tgs1	92	73.214	ENSTTRG00000017239	TGS1	99	62.251	Tursiops_truncatus
ENSMUSG00000028233	Tgs1	99	71.194	ENSUAMG00000027718	TGS1	99	70.960	Ursus_americanus
ENSMUSG00000028233	Tgs1	92	70.189	ENSUMAG00000009761	TGS1	99	69.937	Ursus_maritimus
ENSMUSG00000028233	Tgs1	83	62.726	ENSVPAG00000001166	TGS1	87	63.421	Vicugna_pacos
ENSMUSG00000028233	Tgs1	92	68.015	ENSVVUG00000017821	TGS1	99	68.176	Vulpes_vulpes
ENSMUSG00000028233	Tgs1	99	44.215	ENSXETG00000005648	tgs1	99	44.622	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001510	RNA methylation	-	IEA	Process
GO:0005515	protein binding	12943661.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	12943661.	ISO	Component
GO:0005737	cytoplasm	12943661.	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0009452	7-methylguanosine RNA capping	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process
GO:0036261	7-methylguanosine cap hypermethylation	21873635.	IBA	Process
GO:0036261	7-methylguanosine cap hypermethylation	-	ISO	Process
GO:0071164	RNA trimethylguanosine synthase activity	21873635.	IBA	Function
GO:0071164	RNA trimethylguanosine synthase activity	-	ISO	Function