EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028287 (Gene tree)
Gene ID: 75471
Gene Symbol: 1700009N14Rik
Alias: -
Full Name: RIKEN cDNA 1700009N14 gene
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 1482
Position: chr4: 39450295-39451776
Accession: 1922721
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000029955	-	1258	-	ENSMUSP00000029955	216 (aa)	-	Q14AA6

Gene Model

Click here to download ENSMUSG00000028287's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG
mmu03013	RNA transport	KEGG
mmu05166	Human T-cell leukemia virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028287's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028287	1700009N14Rik	93	86.000	WBGene00004302	ran-1	99	84.434	Caenorhabditis_elegans
ENSMUSG00000028287	1700009N14Rik	99	88.785	ENSDARG00000057026	ran	99	88.785	Danio_rerio
ENSMUSG00000028287	1700009N14Rik	100	92.593	ENSMUSG00000029430	Ran	100	92.593	Mus_musculus
ENSMUSG00000028287	1700009N14Rik	99	80.751	YLR293C	GSP1	97	80.751	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0019904	protein domain specific binding	17984326.	IPI	Function