EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028410 (Gene tree)
Gene ID: 15502
Gene Symbol: Dnaja1
Alias: Hsj2|Nedd7
Full Name: DnaJ heat shock protein family (Hsp40) member A1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 15000
Position: chr4: 40722150-40737149
Accession: 1270129
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000129204	-	4119	-	-	- (aa)	-	-
ENSMUST00000137246	-	916	-	ENSMUSP00000118294	278 (aa)	-	B1AXY1
ENSMUST00000164233	-	5622	-	ENSMUSP00000129730	397 (aa)	-	P63037
ENSMUST00000137476	-	571	-	-	- (aa)	-	-
ENSMUST00000139406	-	379	-	-	- (aa)	-	-
ENSMUST00000149794	-	533	-	ENSMUSP00000121461	128 (aa)	-	B1AXX9
ENSMUST00000126020	-	622	-	-	- (aa)	-	-
ENSMUST00000125442	-	826	-	ENSMUSP00000116601	208 (aa)	-	B1AXY0
ENSMUST00000030118	-	3376	-	ENSMUSP00000030118	397 (aa)	-	P63037
ENSMUST00000148976	-	1130	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028410's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028410's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028410	Dnaja1	100	99.496	ENSG00000086061	DNAJA1	100	99.496	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000151	ubiquitin ligase complex	-	ISO	Component
GO:0001664	G protein-coupled receptor binding	-	ISO	Function
GO:0001671	ATPase activator activity	-	ISO	Function
GO:0005515	protein binding	14752510.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006457	protein folding	-	IEA	Process
GO:0007283	spermatogenesis	15660130.	IMP	Process
GO:0009408	response to heat	-	IEA	Process
GO:0015630	microtubule cytoskeleton	-	ISO	Component
GO:0016020	membrane	-	ISO	Component
GO:0030317	flagellated sperm motility	15660130.	IMP	Process
GO:0030521	androgen receptor signaling pathway	15660130.	IMP	Process
GO:0030544	Hsp70 protein binding	-	ISO	Function
GO:0030957	Tat protein binding	-	ISO	Function
GO:0031072	heat shock protein binding	-	IEA	Function
GO:0031397	negative regulation of protein ubiquitination	-	ISO	Process
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0042769	DNA damage response, detection of DNA damage	-	ISO	Process
GO:0043065	positive regulation of apoptotic process	-	ISO	Process
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:0043231	intracellular membrane-bounded organelle	-	IEA	Component
GO:0043508	negative regulation of JUN kinase activity	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0050750	low-density lipoprotein particle receptor binding	15082773.	ISO	Function
GO:0051082	unfolded protein binding	-	IEA	Function
GO:0051087	chaperone binding	-	ISO	Function
GO:0051223	regulation of protein transport	-	ISO	Process
GO:0055131	C3HC4-type RING finger domain binding	-	ISO	Function
GO:0070585	protein localization to mitochondrion	-	ISO	Process
GO:1901998	toxin transport	23716698.	IMP	Process
GO:1903748	negative regulation of establishment of protein localization to mitochondrion	-	ISO	Process
GO:1905259	negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway	-	ISO	Process