EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028431 (Gene tree)
Gene ID: 230233
Gene Symbol: Elp1
Alias: 3110040G09Rik|C78473|IKAP|Ikbkap
Full Name: elongator complex protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 52652
Position: chr4: 56749680-56802331
Accession: 1914544
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000150002	-	1841	-	-	- (aa)	-	-
ENSMUST00000139445	-	846	-	-	- (aa)	-	-
ENSMUST00000171411	-	953	-	-	- (aa)	-	-
ENSMUST00000126441	-	571	-	-	- (aa)	-	-
ENSMUST00000030140	-	6160	-	ENSMUSP00000030140	1333 (aa)	-	Q7TT37
ENSMUST00000140595	-	680	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028431's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028431	Elp1	100	80.899	ENSG00000070061	ELP1	100	80.899	Homo_sapiens
ENSMUSG00000028431	Elp1	77	32.289	YLR384C	IKI3	79	32.289	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000993	RNA polymerase II complex binding	-	ISO	Function
GO:0002098	tRNA wobble uridine modification	-	IEA	Process
GO:0004672	protein kinase activity	-	ISO	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006357	regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0007252	I-kappaB phosphorylation	-	ISO	Process
GO:0008023	transcription elongation factor complex	-	ISO	Component
GO:0008607	phosphorylase kinase regulator activity	-	ISO	Function
GO:0030335	positive regulation of cell migration	22854966.	IMP	Process
GO:0033588	Elongator holoenzyme complex	-	ISO	Component