EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000139772	-	443	-	-	- (aa)	-	-
ENSMUST00000129931	-	670	-	-	- (aa)	-	-
ENSMUST00000102744	-	3014	XM_011240469	ENSMUSP00000099805	840 (aa)	XP_011238771	Q9Z1N2
ENSMUST00000130162	-	679	-	-	- (aa)	-	-
ENSMUST00000143497	-	173	-	-	- (aa)	-	-

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu04110	Cell cycle	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000278	mitotic cell cycle	21873635.	IBA	Process
GO:0000784	nuclear chromosome, telomeric region	21873635.	IBA	Component
GO:0000784	nuclear chromosome, telomeric region	-	ISO	Component
GO:0000808	origin recognition complex	-	ISO	Component
GO:0003677	DNA binding	10835370.	TAS	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0003688	DNA replication origin binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	10835370.	TAS	Component
GO:0005664	nuclear origin of replication recognition complex	21873635.	IBA	Component
GO:0005664	nuclear origin of replication recognition complex	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006260	DNA replication	10835370.	TAS	Process
GO:0006270	DNA replication initiation	21873635.	IBA	Process
GO:0033314	mitotic DNA replication checkpoint	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048661	positive regulation of smooth muscle cell proliferation	-	ISO	Process
GO:0070318	positive regulation of G0 to G1 transition	-	ISO	Process