EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028603 (Gene tree)
Gene ID: 20280
Gene Symbol: Scp2
Alias: NSL-TP|SCP-2|SCPx|nonspecific lipid transfer protein|ns-LTP
Full Name: sterol carrier protein 2%2C liver
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 101160
Position: chr4: 108043839-108144998
Accession: 98254
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000106701	-	772	-	ENSMUSP00000102312	143 (aa)	-	P32020
ENSMUST00000135379	-	809	-	-	- (aa)	-	-
ENSMUST00000145721	-	868	-	-	- (aa)	-	-
ENSMUST00000143340	-	911	-	-	- (aa)	-	-
ENSMUST00000123792	-	855	-	-	- (aa)	-	-
ENSMUST00000149106	-	750	-	ENSMUSP00000121673	231 (aa)	-	A2APS4
ENSMUST00000122878	-	758	-	-	- (aa)	-	-
ENSMUST00000130776	-	527	-	ENSMUSP00000123630	110 (aa)	-	A2APS5
ENSMUST00000030340	-	2640	XM_011240477	ENSMUSP00000030340	547 (aa)	XP_011238779	P32020

Gene Model

Click here to download ENSMUSG00000028603's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00120	Primary bile acid biosynthesis	KEGG
mmu01040	Biosynthesis of unsaturated fatty acids	KEGG
mmu01100	Metabolic pathways	KEGG
mmu01212	Fatty acid metabolism	KEGG
mmu03320	PPAR signaling pathway	KEGG
mmu04146	Peroxisome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028603's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000062	fatty-acyl-CoA binding	-	ISO	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0003988	acetyl-CoA C-acyltransferase activity	-	ISO	Function
GO:0005102	signaling receptor binding	-	ISO	Function
GO:0005515	protein binding	11591653.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005777	peroxisome	-	ISO	Component
GO:0005777	peroxisome	7713503.	TAS	Component
GO:0005782	peroxisomal matrix	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006637	acyl-CoA metabolic process	7713503.	TAS	Process
GO:0006694	steroid biosynthetic process	21873635.	IBA	Process
GO:0006694	steroid biosynthetic process	-	ISO	Process
GO:0006701	progesterone biosynthetic process	-	ISO	Process
GO:0006869	lipid transport	-	IEA	Process
GO:0007031	peroxisome organization	7713503.	IMP	Process
GO:0007568	aging	-	ISO	Process
GO:0008289	lipid binding	-	IEA	Function
GO:0008525	phosphatidylcholine transporter activity	-	ISO	Function
GO:0008526	phosphatidylinositol transporter activity	-	ISO	Function
GO:0010893	positive regulation of steroid biosynthetic process	-	ISO	Process
GO:0015485	cholesterol binding	-	ISO	Function
GO:0015914	phospholipid transport	21873635.	IBA	Process
GO:0015914	phospholipid transport	-	ISO	Process
GO:0016020	membrane	-	ISO	Component
GO:0016740	transferase activity	-	IEA	Function
GO:0016746	transferase activity, transferring acyl groups	-	IEA	Function
GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	-	IEA	Function
GO:0017127	cholesterol transporter activity	-	ISO	Function
GO:0019898	extrinsic component of membrane	-	ISO	Component
GO:0031315	extrinsic component of mitochondrial outer membrane	-	ISO	Component
GO:0032385	positive regulation of intracellular cholesterol transport	21873635.	IBA	Process
GO:0032385	positive regulation of intracellular cholesterol transport	-	ISO	Process
GO:0032959	inositol trisphosphate biosynthetic process	-	ISO	Process
GO:0032991	protein-containing complex	-	ISO	Component
GO:0033814	propanoyl-CoA C-acyltransferase activity	-	IEA	Function
GO:0036042	long-chain fatty acyl-CoA binding	-	ISO	Function
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0043065	positive regulation of apoptotic process	-	ISO	Process
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0045542	positive regulation of cholesterol biosynthetic process	-	ISO	Process
GO:0045940	positive regulation of steroid metabolic process	-	ISO	Process
GO:0046982	protein heterodimerization activity	-	ISO	Function
GO:0050632	propionyl-CoA C2-trimethyltridecanoyltransferase activity	-	ISO	Function
GO:0050632	propionyl-CoA C2-trimethyltridecanoyltransferase activity	7713503.	TAS	Function
GO:0070538	oleic acid binding	-	ISO	Function
GO:0072659	protein localization to plasma membrane	-	ISO	Process
GO:1901373	lipid hydroperoxide transport	-	ISO	Process
GO:1904109	positive regulation of cholesterol import	-	ISO	Process
GO:1904121	phosphatidylethanolamine transporter activity	-	ISO	Function