EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028607 (Gene tree)
Gene ID: 12896
Gene Symbol: Cpt2
Alias: CPT II|CPTII
Full Name: carnitine palmitoyltransferase 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 19630
Position: chr4: 107903981-107923610
Accession: 109176
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000106720	-	1015	-	ENSMUSP00000102331	223 (aa)	-	A2A8E7
ENSMUST00000141738	-	575	-	-	- (aa)	-	-
ENSMUST00000106719	-	876	-	ENSMUSP00000102330	265 (aa)	-	A2A8E8
ENSMUST00000131644	-	387	-	ENSMUSP00000114362	88 (aa)	-	A2A8E9
ENSMUST00000175651	-	634	-	-	- (aa)	-	-
ENSMUST00000030345	-	2372	-	ENSMUSP00000030345	658 (aa)	-	P52825

Gene Model

Click here to download ENSMUSG00000028607's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00071	Fatty acid degradation	KEGG
mmu01212	Fatty acid metabolism	KEGG
mmu03320	PPAR signaling pathway	KEGG
mmu04714	Thermogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028607's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028607	Cpt2	94	45.570	FBgn0035383	CPT2	94	45.570	Drosophila_melanogaster

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004095	carnitine O-palmitoyltransferase activity	21873635.	IBA	Function
GO:0004095	carnitine O-palmitoyltransferase activity	-	ISO	Function
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005743	mitochondrial inner membrane	-	IEA	Component
GO:0006629	lipid metabolic process	-	IEA	Process
GO:0006631	fatty acid metabolic process	-	IEA	Process
GO:0006635	fatty acid beta-oxidation	21873635.	IBA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016740	transferase activity	-	IEA	Function
GO:0016746	transferase activity, transferring acyl groups	-	IEA	Function
GO:0120162	positive regulation of cold-induced thermogenesis	25578732.	IMP	Process