EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028651 (Gene tree)
Gene ID: 56031
Gene Symbol: Ppie
Alias: 2010010D16Rik
Full Name: peptidylprolyl isomerase E (cyclophilin E)
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 12837 bases
Position: chr4:123127115-123139951
Accession: 1917118
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000030404	RRM_1	PF00076.22	1.1e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000030404	-	1188	XM_006503249	ENSMUSP00000030404	301 (aa)	XP_006503312	Q9QZH3
ENSMUST00000137778	-	669	-	-	- (aa)	-	-
ENSMUST00000136466	-	861	-	-	- (aa)	-	-
ENSMUST00000126558	-	804	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028651's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028651's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028651	Ppie	100	98.339	ENSG00000084072	PPIE	100	98.592	Homo_sapiens
ENSMUSG00000028651	Ppie	100	85.430	ENSAPOG00000001160	ppie	100	85.762	Acanthochromis_polyacanthus
ENSMUSG00000028651	Ppie	100	81.788	ENSACIG00000022599	ppie	99	82.119	Amphilophus_citrinellus
ENSMUSG00000028651	Ppie	100	85.430	ENSAOCG00000021474	ppie	100	85.762	Amphiprion_ocellaris
ENSMUSG00000028651	Ppie	100	85.430	ENSAPEG00000019253	ppie	100	85.762	Amphiprion_percula
ENSMUSG00000028651	Ppie	100	84.718	ENSATEG00000007395	ppie	100	84.718	Anabas_testudineus
ENSMUSG00000028651	Ppie	100	90.698	ENSACAG00000002688	PPIE	100	90.698	Anolis_carolinensis
ENSMUSG00000028651	Ppie	100	98.007	ENSANAG00000033595	PPIE	100	98.007	Aotus_nancymaae
ENSMUSG00000028651	Ppie	100	85.430	ENSACLG00000019518	ppie	100	85.099	Astatotilapia_calliptera
ENSMUSG00000028651	Ppie	100	85.714	ENSAMXG00000018767	ppie	100	85.382	Astyanax_mexicanus
ENSMUSG00000028651	Ppie	100	97.010	ENSBTAG00000047314	PPIE	100	97.010	Bos_taurus
ENSMUSG00000028651	Ppie	99	96.667	ENSCJAG00000002589	PPIE	100	95.017	Callithrix_jacchus
ENSMUSG00000028651	Ppie	100	98.007	ENSCAFG00000003031	PPIE	100	98.007	Canis_familiaris
ENSMUSG00000028651	Ppie	100	98.007	ENSCAFG00020004132	PPIE	100	98.007	Canis_lupus_dingo
ENSMUSG00000028651	Ppie	98	55.446	ENSCHIG00000023905	-	100	55.446	Capra_hircus
ENSMUSG00000028651	Ppie	100	93.688	ENSCHIG00000012509	-	100	93.688	Capra_hircus
ENSMUSG00000028651	Ppie	100	98.007	ENSTSYG00000000401	PPIE	100	98.007	Carlito_syrichta
ENSMUSG00000028651	Ppie	100	98.007	ENSCPOG00000007365	PPIE	100	98.007	Cavia_porcellus
ENSMUSG00000028651	Ppie	100	98.007	ENSCCAG00000024434	PPIE	100	98.007	Cebus_capucinus
ENSMUSG00000028651	Ppie	100	98.339	ENSCATG00000034495	PPIE	100	98.339	Cercocebus_atys
ENSMUSG00000028651	Ppie	100	92.027	ENSCLAG00000010288	PPIE	100	92.027	Chinchilla_lanigera
ENSMUSG00000028651	Ppie	100	97.697	ENSCSAG00000001131	PPIE	100	97.697	Chlorocebus_sabaeus
ENSMUSG00000028651	Ppie	77	69.264	ENSCHOG00000009018	-	100	69.264	Choloepus_hoffmanni
ENSMUSG00000028651	Ppie	100	88.372	ENSCPBG00000001090	PPIE	100	88.372	Chrysemys_picta_bellii
ENSMUSG00000028651	Ppie	100	99.003	ENSCANG00000029996	PPIE	100	99.003	Colobus_angolensis_palliatus
ENSMUSG00000028651	Ppie	100	98.671	ENSCGRG00001018491	Ppie	100	98.671	Cricetulus_griseus_chok1gshd
ENSMUSG00000028651	Ppie	100	98.671	ENSCGRG00000005685	Ppie	100	98.671	Cricetulus_griseus_crigri
ENSMUSG00000028651	Ppie	100	83.553	ENSCSEG00000000047	ppie	100	83.553	Cynoglossus_semilaevis
ENSMUSG00000028651	Ppie	100	84.718	ENSCVAG00000019238	ppie	100	84.718	Cyprinodon_variegatus
ENSMUSG00000028651	Ppie	100	85.099	ENSDARG00000103234	ppie	91	85.099	Danio_rerio
ENSMUSG00000028651	Ppie	99	86.731	ENSDNOG00000002404	-	99	86.731	Dasypus_novemcinctus
ENSMUSG00000028651	Ppie	99	97.667	ENSDNOG00000034942	-	99	97.667	Dasypus_novemcinctus
ENSMUSG00000028651	Ppie	100	98.671	ENSDORG00000005175	Ppie	100	98.671	Dipodomys_ordii
ENSMUSG00000028651	Ppie	100	94.352	ENSEASG00005014118	-	100	94.352	Equus_asinus_asinus
ENSMUSG00000028651	Ppie	100	97.674	ENSECAG00000031692	-	100	97.674	Equus_caballus
ENSMUSG00000028651	Ppie	100	94.352	ENSECAG00000038706	-	100	94.352	Equus_caballus
ENSMUSG00000028651	Ppie	100	82.838	ENSELUG00000003162	ppie	100	82.450	Esox_lucius
ENSMUSG00000028651	Ppie	100	98.007	ENSFCAG00000006027	-	100	98.007	Felis_catus
ENSMUSG00000028651	Ppie	99	89.632	ENSFALG00000000545	PPIE	93	89.632	Ficedula_albicollis
ENSMUSG00000028651	Ppie	97	96.233	ENSFDAG00000017337	PPIE	97	96.233	Fukomys_damarensis
ENSMUSG00000028651	Ppie	100	85.382	ENSFHEG00000007560	ppie	100	85.382	Fundulus_heteroclitus
ENSMUSG00000028651	Ppie	100	81.457	ENSGMOG00000019015	ppie	100	80.795	Gadus_morhua
ENSMUSG00000028651	Ppie	97	92.123	ENSGALG00000013383	PPIE	91	92.123	Gallus_gallus
ENSMUSG00000028651	Ppie	100	84.718	ENSGAFG00000018146	ppie	100	84.718	Gambusia_affinis
ENSMUSG00000028651	Ppie	100	82.781	ENSGACG00000007165	ppie	100	82.781	Gasterosteus_aculeatus
ENSMUSG00000028651	Ppie	77	93.534	ENSGAGG00000001882	PPIE	95	93.534	Gopherus_agassizii
ENSMUSG00000028651	Ppie	100	98.339	ENSGGOG00000015783	PPIE	100	98.339	Gorilla_gorilla
ENSMUSG00000028651	Ppie	100	85.099	ENSHBUG00000020159	ppie	100	84.768	Haplochromis_burtoni
ENSMUSG00000028651	Ppie	100	97.342	ENSHGLG00000012598	PPIE	100	97.342	Heterocephalus_glaber_female
ENSMUSG00000028651	Ppie	98	96.259	ENSHGLG00100001779	PPIE	98	96.907	Heterocephalus_glaber_male
ENSMUSG00000028651	Ppie	99	85.284	ENSHCOG00000012644	ppie	99	85.284	Hippocampus_comes
ENSMUSG00000028651	Ppie	99	88.040	ENSIPUG00000016601	ppie	99	88.372	Ictalurus_punctatus
ENSMUSG00000028651	Ppie	100	99.003	ENSSTOG00000010445	PPIE	100	99.003	Ictidomys_tridecemlineatus
ENSMUSG00000028651	Ppie	100	98.339	ENSJJAG00000022703	Ppie	100	98.339	Jaculus_jaculus
ENSMUSG00000028651	Ppie	100	84.385	ENSKMAG00000013555	ppie	100	84.385	Kryptolebias_marmoratus
ENSMUSG00000028651	Ppie	100	87.748	ENSLACG00000011207	PPIE	100	87.748	Latimeria_chalumnae
ENSMUSG00000028651	Ppie	100	97.010	ENSLAFG00000028312	-	100	97.010	Loxodonta_africana
ENSMUSG00000028651	Ppie	100	98.339	ENSMFAG00000002082	PPIE	100	98.339	Macaca_fascicularis
ENSMUSG00000028651	Ppie	100	98.339	ENSMMUG00000018869	PPIE	100	98.339	Macaca_mulatta
ENSMUSG00000028651	Ppie	100	98.339	ENSMNEG00000031362	PPIE	100	98.339	Macaca_nemestrina
ENSMUSG00000028651	Ppie	100	98.339	ENSMLEG00000040735	PPIE	100	98.339	Mandrillus_leucophaeus
ENSMUSG00000028651	Ppie	100	83.113	ENSMAMG00000010005	ppie	100	83.444	Mastacembelus_armatus
ENSMUSG00000028651	Ppie	100	85.430	ENSMZEG00005006117	ppie	100	85.099	Maylandia_zebra
ENSMUSG00000028651	Ppie	56	98.817	ENSMAUG00000020323	Ppie	100	98.817	Mesocricetus_auratus
ENSMUSG00000028651	Ppie	100	98.339	ENSMOCG00000018443	-	100	98.339	Microtus_ochrogaster
ENSMUSG00000028651	Ppie	97	95.222	ENSMOCG00000020138	-	82	95.222	Microtus_ochrogaster
ENSMUSG00000028651	Ppie	100	84.053	ENSMMOG00000002329	ppie	100	84.053	Mola_mola
ENSMUSG00000028651	Ppie	100	93.023	ENSMODG00000017659	PPIE	100	93.023	Monodelphis_domestica
ENSMUSG00000028651	Ppie	100	83.444	ENSMALG00000011041	ppie	100	83.113	Monopterus_albus
ENSMUSG00000028651	Ppie	100	99.668	MGP_CAROLIEiJ_G0026431	Ppie	100	99.668	Mus_caroli
ENSMUSG00000028651	Ppie	100	99.668	MGP_PahariEiJ_G0028761	Ppie	100	99.668	Mus_pahari
ENSMUSG00000028651	Ppie	100	100.000	MGP_SPRETEiJ_G0027411	Ppie	100	100.000	Mus_spretus
ENSMUSG00000028651	Ppie	100	97.351	ENSMPUG00000014345	PPIE	100	97.351	Mustela_putorius_furo
ENSMUSG00000028651	Ppie	100	97.342	ENSMLUG00000006201	-	100	97.342	Myotis_lucifugus
ENSMUSG00000028651	Ppie	97	51.447	ENSMLUG00000027940	-	97	53.333	Myotis_lucifugus
ENSMUSG00000028651	Ppie	77	98.707	ENSMLUG00000016233	-	100	98.707	Myotis_lucifugus
ENSMUSG00000028651	Ppie	100	98.339	ENSNLEG00000011979	PPIE	100	98.339	Nomascus_leucogenys
ENSMUSG00000028651	Ppie	77	89.177	ENSMEUG00000005090	PPIE	100	89.177	Notamacropus_eugenii
ENSMUSG00000028651	Ppie	90	85.185	ENSOPRG00000015178	-	99	85.185	Ochotona_princeps
ENSMUSG00000028651	Ppie	100	74.419	ENSODEG00000013727	-	74	74.419	Octodon_degus
ENSMUSG00000028651	Ppie	100	97.010	ENSODEG00000007670	-	100	97.010	Octodon_degus
ENSMUSG00000028651	Ppie	100	85.099	ENSONIG00000008165	ppie	100	84.768	Oreochromis_niloticus
ENSMUSG00000028651	Ppie	100	93.355	ENSOANG00000010003	PPIE	100	91.030	Ornithorhynchus_anatinus
ENSMUSG00000028651	Ppie	99	98.000	ENSOCUG00000007665	PPIE	99	98.000	Oryctolagus_cuniculus
ENSMUSG00000028651	Ppie	100	84.768	ENSORLG00015015095	ppie	100	84.768	Oryzias_latipes_hsok
ENSMUSG00000028651	Ppie	100	84.768	ENSOMEG00000014458	ppie	100	84.768	Oryzias_melastigma
ENSMUSG00000028651	Ppie	100	96.711	ENSOGAG00000003620	PPIE	100	96.711	Otolemur_garnettii
ENSMUSG00000028651	Ppie	100	95.724	ENSOARG00000020124	PPIE	100	95.724	Ovis_aries
ENSMUSG00000028651	Ppie	100	98.339	ENSPPAG00000042403	PPIE	100	98.339	Pan_paniscus
ENSMUSG00000028651	Ppie	100	98.007	ENSPPRG00000014232	PPIE	100	98.007	Panthera_pardus
ENSMUSG00000028651	Ppie	100	98.007	ENSPTIG00000003196	PPIE	100	98.007	Panthera_tigris_altaica
ENSMUSG00000028651	Ppie	100	98.339	ENSPTRG00000000577	PPIE	100	98.339	Pan_troglodytes
ENSMUSG00000028651	Ppie	100	98.339	ENSPANG00000000575	PPIE	100	98.339	Papio_anubis
ENSMUSG00000028651	Ppie	98	90.508	ENSPSIG00000016383	PPIE	88	90.508	Pelodiscus_sinensis
ENSMUSG00000028651	Ppie	100	84.488	ENSPMGG00000009082	ppie	100	84.158	Periophthalmus_magnuspinnatus
ENSMUSG00000028651	Ppie	56	98.225	ENSPEMG00000013681	Ppie	100	98.225	Peromyscus_maniculatus_bairdii
ENSMUSG00000028651	Ppie	100	92.359	ENSPCIG00000021413	PPIE	100	92.359	Phascolarctos_cinereus
ENSMUSG00000028651	Ppie	100	83.775	ENSPFOG00000002535	ppie	100	83.775	Poecilia_formosa
ENSMUSG00000028651	Ppie	100	84.053	ENSPLAG00000010126	ppie	100	84.053	Poecilia_latipinna
ENSMUSG00000028651	Ppie	100	84.053	ENSPMEG00000019748	ppie	100	84.053	Poecilia_mexicana
ENSMUSG00000028651	Ppie	99	84.000	ENSPREG00000001551	ppie	99	84.000	Poecilia_reticulata
ENSMUSG00000028651	Ppie	98	97.619	ENSPPYG00000001501	PPIE	98	97.619	Pongo_abelii
ENSMUSG00000028651	Ppie	93	98.925	ENSPVAG00000002120	PPIE	100	98.925	Pteropus_vampyrus
ENSMUSG00000028651	Ppie	100	82.781	ENSPNYG00000006336	ppie	100	83.113	Pundamilia_nyererei
ENSMUSG00000028651	Ppie	100	86.424	ENSPNAG00000007122	ppie	100	86.755	Pygocentrus_nattereri
ENSMUSG00000028651	Ppie	100	98.339	ENSRNOG00000014762	Ppie	100	98.339	Rattus_norvegicus
ENSMUSG00000028651	Ppie	100	98.339	ENSRBIG00000041625	PPIE	100	98.339	Rhinopithecus_bieti
ENSMUSG00000028651	Ppie	99	98.328	ENSRROG00000044935	PPIE	100	95.349	Rhinopithecus_roxellana
ENSMUSG00000028651	Ppie	100	98.007	ENSSBOG00000035061	PPIE	100	98.007	Saimiri_boliviensis_boliviensis
ENSMUSG00000028651	Ppie	100	92.359	ENSSHAG00000018113	PPIE	100	92.359	Sarcophilus_harrisii
ENSMUSG00000028651	Ppie	100	87.043	ENSSFOG00015007542	ppie	100	87.043	Scleropages_formosus
ENSMUSG00000028651	Ppie	100	84.106	ENSSMAG00000008993	ppie	100	83.775	Scophthalmus_maximus
ENSMUSG00000028651	Ppie	100	84.437	ENSSDUG00000012593	ppie	100	84.437	Seriola_dumerili
ENSMUSG00000028651	Ppie	100	84.437	ENSSLDG00000013079	ppie	100	84.437	Seriola_lalandi_dorsalis
ENSMUSG00000028651	Ppie	93	93.190	ENSSARG00000005703	PPIE	100	93.190	Sorex_araneus
ENSMUSG00000028651	Ppie	95	88.502	ENSSPUG00000003147	PPIE	100	88.502	Sphenodon_punctatus
ENSMUSG00000028651	Ppie	100	85.762	ENSSPAG00000009232	ppie	100	85.762	Stegastes_partitus
ENSMUSG00000028651	Ppie	98	96.610	ENSSSCG00000003664	-	95	97.924	Sus_scrofa
ENSMUSG00000028651	Ppie	77	84.979	ENSTGUG00000001276	PPIE	100	84.979	Taeniopygia_guttata
ENSMUSG00000028651	Ppie	99	86.000	ENSTRUG00000006308	ppie	99	85.667	Takifugu_rubripes
ENSMUSG00000028651	Ppie	99	85.714	ENSTNIG00000016901	ppie	99	86.047	Tetraodon_nigroviridis
ENSMUSG00000028651	Ppie	97	93.559	ENSTTRG00000014385	PPIE	95	93.559	Tursiops_truncatus
ENSMUSG00000028651	Ppie	100	98.007	ENSUMAG00000017319	PPIE	100	98.007	Ursus_maritimus
ENSMUSG00000028651	Ppie	78	85.957	ENSVPAG00000010049	PPIE	100	85.957	Vicugna_pacos
ENSMUSG00000028651	Ppie	100	98.339	ENSVVUG00000005268	-	92	98.339	Vulpes_vulpes
ENSMUSG00000028651	Ppie	100	87.708	ENSXETG00000010944	ppie	100	87.708	Xenopus_tropicalis
ENSMUSG00000028651	Ppie	100	84.718	ENSXMAG00000019027	ppie	100	84.718	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0000413	protein peptidyl-prolyl isomerization	-	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	-	ISO	Function
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	21873635.	IBA	Function
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006355	regulation of transcription, DNA-templated	-	ISO	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0006457	protein folding	-	IEA	Process
GO:0008143	poly(A) binding	-	ISO	Function
GO:0008380	RNA splicing	-	IEA	Process
GO:0016018	cyclosporin A binding	21873635.	IBA	Function
GO:0016018	cyclosporin A binding	-	ISO	Function
GO:0016607	nuclear speck	-	ISO	Component
GO:0016853	isomerase activity	-	IEA	Function
GO:0042026	protein refolding	21873635.	IBA	Process
GO:0045070	positive regulation of viral genome replication	-	ISO	Process
GO:0051082	unfolded protein binding	21873635.	IBA	Function
GO:0071007	U2-type catalytic step 2 spliceosome	-	ISO	Component
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component