EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028653 (Gene tree)
Gene ID: 66966
Gene Symbol: Trit1
Alias: 2310075G14Rik|MOD5
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 38353 bases
Position: chr4:123016597-123054949
Accession: 1914216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000099709	IPPT	PF01715.17	4.5e-65	1	1
ENSMUSP00000099709	zf-C2H2_jaz	PF12171.8	1e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000102649	-	2074	XM_017320359	ENSMUSP00000099709	467 (aa)	XP_017175848	Q80UN9
ENSMUST00000141855	-	512	-	-	- (aa)	-	-
ENSMUST00000147165	-	1964	NR_151450	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028653's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028653	Trit1	100	89.293	ENSG00000043514	TRIT1	99	91.716	Homo_sapiens
ENSMUSG00000028653	Trit1	89	64.524	ENSAPOG00000020918	trit1	94	63.014	Acanthochromis_polyacanthus
ENSMUSG00000028653	Trit1	100	88.009	ENSAMEG00000004342	TRIT1	100	88.009	Ailuropoda_melanoleuca
ENSMUSG00000028653	Trit1	85	64.824	ENSACIG00000017409	trit1	92	63.341	Amphilophus_citrinellus
ENSMUSG00000028653	Trit1	92	61.712	ENSAOCG00000009850	trit1	92	61.712	Amphiprion_ocellaris
ENSMUSG00000028653	Trit1	92	61.712	ENSAPEG00000001481	trit1	92	61.712	Amphiprion_percula
ENSMUSG00000028653	Trit1	95	59.688	ENSATEG00000005426	trit1	88	60.690	Anabas_testudineus
ENSMUSG00000028653	Trit1	74	66.193	ENSAPLG00000011421	TRIT1	100	66.193	Anas_platyrhynchos
ENSMUSG00000028653	Trit1	87	73.153	ENSACAG00000002280	TRIT1	83	73.153	Anolis_carolinensis
ENSMUSG00000028653	Trit1	100	88.223	ENSANAG00000030732	TRIT1	100	88.342	Aotus_nancymaae
ENSMUSG00000028653	Trit1	99	57.917	ENSACLG00000004920	trit1	98	58.635	Astatotilapia_calliptera
ENSMUSG00000028653	Trit1	91	62.704	ENSAMXG00000010959	trit1	90	63.902	Astyanax_mexicanus
ENSMUSG00000028653	Trit1	100	87.580	ENSBTAG00000013832	TRIT1	100	87.580	Bos_taurus
ENSMUSG00000028653	Trit1	84	34.550	WBGene00001740	gro-1	95	34.198	Caenorhabditis_elegans
ENSMUSG00000028653	Trit1	100	88.651	ENSCJAG00000002620	TRIT1	100	88.651	Callithrix_jacchus
ENSMUSG00000028653	Trit1	100	87.179	ENSCAFG00000003048	TRIT1	100	87.179	Canis_familiaris
ENSMUSG00000028653	Trit1	100	85.239	ENSCAFG00020003875	TRIT1	97	89.459	Canis_lupus_dingo
ENSMUSG00000028653	Trit1	98	85.683	ENSCHIG00000013259	TRIT1	98	85.683	Capra_hircus
ENSMUSG00000028653	Trit1	97	88.767	ENSTSYG00000004363	TRIT1	100	88.651	Carlito_syrichta
ENSMUSG00000028653	Trit1	77	84.958	ENSCAPG00000017001	TRIT1	93	84.958	Cavia_aperea
ENSMUSG00000028653	Trit1	100	86.510	ENSCPOG00000012820	TRIT1	100	86.510	Cavia_porcellus
ENSMUSG00000028653	Trit1	100	86.938	ENSCCAG00000031271	TRIT1	100	86.938	Cebus_capucinus
ENSMUSG00000028653	Trit1	99	83.156	ENSCATG00000034344	TRIT1	97	88.824	Cercocebus_atys
ENSMUSG00000028653	Trit1	100	85.867	ENSCLAG00000009828	TRIT1	100	85.867	Chinchilla_lanigera
ENSMUSG00000028653	Trit1	88	87.835	ENSCSAG00000001137	TRIT1	100	87.835	Chlorocebus_sabaeus
ENSMUSG00000028653	Trit1	97	85.430	ENSCHOG00000000435	TRIT1	100	85.225	Choloepus_hoffmanni
ENSMUSG00000028653	Trit1	87	42.131	ENSCSAVG00000002050	-	91	42.131	Ciona_savignyi
ENSMUSG00000028653	Trit1	100	87.152	ENSCANG00000043008	TRIT1	100	87.152	Colobus_angolensis_palliatus
ENSMUSG00000028653	Trit1	100	91.649	ENSCGRG00001001894	Trit1	100	91.649	Cricetulus_griseus_chok1gshd
ENSMUSG00000028653	Trit1	88	90.557	ENSCGRG00000007059	Trit1	91	90.465	Cricetulus_griseus_crigri
ENSMUSG00000028653	Trit1	88	60.859	ENSCSEG00000009574	trit1	93	60.412	Cynoglossus_semilaevis
ENSMUSG00000028653	Trit1	96	59.911	ENSDARG00000032876	trit1	95	66.134	Danio_rerio
ENSMUSG00000028653	Trit1	97	75.875	ENSDNOG00000001994	TRIT1	100	75.947	Dasypus_novemcinctus
ENSMUSG00000028653	Trit1	96	78.319	ENSDORG00000012449	Trit1	98	78.319	Dipodomys_ordii
ENSMUSG00000028653	Trit1	87	41.002	FBgn0043799	CG31381	91	40.406	Drosophila_melanogaster
ENSMUSG00000028653	Trit1	87	88.675	ENSETEG00000008733	TRIT1	98	88.675	Echinops_telfairi
ENSMUSG00000028653	Trit1	88	57.246	ENSEBUG00000012845	trit1	92	57.246	Eptatretus_burgeri
ENSMUSG00000028653	Trit1	98	85.837	ENSECAG00000010597	TRIT1	92	86.105	Equus_caballus
ENSMUSG00000028653	Trit1	100	66.947	ENSEEUG00000009269	TRIT1	100	66.947	Erinaceus_europaeus
ENSMUSG00000028653	Trit1	90	56.604	ENSELUG00000017278	trit1	84	57.985	Esox_lucius
ENSMUSG00000028653	Trit1	97	88.987	ENSFCAG00000006029	TRIT1	100	88.437	Felis_catus
ENSMUSG00000028653	Trit1	84	74.169	ENSFALG00000000532	TRIT1	97	74.169	Ficedula_albicollis
ENSMUSG00000028653	Trit1	94	84.513	ENSFDAG00000003098	TRIT1	99	84.513	Fukomys_damarensis
ENSMUSG00000028653	Trit1	68	54.489	ENSFHEG00000022274	trit1	96	54.489	Fundulus_heteroclitus
ENSMUSG00000028653	Trit1	91	61.872	ENSGMOG00000006522	trit1	98	62.736	Gadus_morhua
ENSMUSG00000028653	Trit1	92	73.550	ENSGALG00000003851	TRIT1	89	76.716	Gallus_gallus
ENSMUSG00000028653	Trit1	75	61.299	ENSGAFG00000018636	trit1	100	61.326	Gambusia_affinis
ENSMUSG00000028653	Trit1	91	61.697	ENSGACG00000008493	trit1	95	62.981	Gasterosteus_aculeatus
ENSMUSG00000028653	Trit1	87	74.321	ENSGAGG00000000522	TRIT1	99	74.321	Gopherus_agassizii
ENSMUSG00000028653	Trit1	100	89.079	ENSGGOG00000010070	TRIT1	100	89.079	Gorilla_gorilla
ENSMUSG00000028653	Trit1	99	58.333	ENSHBUG00000018999	trit1	98	59.062	Haplochromis_burtoni
ENSMUSG00000028653	Trit1	97	77.363	ENSHGLG00000009564	-	98	77.293	Heterocephalus_glaber_female
ENSMUSG00000028653	Trit1	97	86.475	ENSHGLG00000010308	-	97	86.475	Heterocephalus_glaber_female
ENSMUSG00000028653	Trit1	99	86.739	ENSHGLG00100015382	-	99	86.739	Heterocephalus_glaber_male
ENSMUSG00000028653	Trit1	82	67.885	ENSHGLG00100018159	-	99	67.885	Heterocephalus_glaber_male
ENSMUSG00000028653	Trit1	88	62.264	ENSHCOG00000006755	trit1	82	62.830	Hippocampus_comes
ENSMUSG00000028653	Trit1	91	62.929	ENSIPUG00000021822	trit1	90	62.929	Ictalurus_punctatus
ENSMUSG00000028653	Trit1	100	88.865	ENSSTOG00000006446	TRIT1	97	88.865	Ictidomys_tridecemlineatus
ENSMUSG00000028653	Trit1	96	83.964	ENSJJAG00000000316	-	99	83.964	Jaculus_jaculus
ENSMUSG00000028653	Trit1	98	81.087	ENSJJAG00000000300	-	98	81.087	Jaculus_jaculus
ENSMUSG00000028653	Trit1	93	62.045	ENSKMAG00000021788	trit1	90	62.045	Kryptolebias_marmoratus
ENSMUSG00000028653	Trit1	91	61.949	ENSLBEG00000024262	trit1	87	62.830	Labrus_bergylta
ENSMUSG00000028653	Trit1	90	67.523	ENSLACG00000013861	TRIT1	89	66.820	Latimeria_chalumnae
ENSMUSG00000028653	Trit1	95	60.841	ENSLOCG00000002057	trit1	89	62.704	Lepisosteus_oculatus
ENSMUSG00000028653	Trit1	100	87.152	ENSLAFG00000016876	TRIT1	98	87.336	Loxodonta_africana
ENSMUSG00000028653	Trit1	100	88.009	ENSMFAG00000001316	TRIT1	100	88.009	Macaca_fascicularis
ENSMUSG00000028653	Trit1	100	88.009	ENSMMUG00000016220	TRIT1	100	88.009	Macaca_mulatta
ENSMUSG00000028653	Trit1	100	88.009	ENSMNEG00000023137	TRIT1	100	88.009	Macaca_nemestrina
ENSMUSG00000028653	Trit1	99	87.983	ENSMLEG00000035296	TRIT1	99	87.983	Mandrillus_leucophaeus
ENSMUSG00000028653	Trit1	91	61.201	ENSMAMG00000005868	trit1	90	60.460	Mastacembelus_armatus
ENSMUSG00000028653	Trit1	99	57.708	ENSMZEG00005011506	trit1	98	58.422	Maylandia_zebra
ENSMUSG00000028653	Trit1	79	75.269	ENSMGAG00000005516	TRIT1	99	75.269	Meleagris_gallopavo
ENSMUSG00000028653	Trit1	100	92.077	ENSMAUG00000000399	Trit1	100	92.077	Mesocricetus_auratus
ENSMUSG00000028653	Trit1	97	88.521	ENSMICG00000016294	TRIT1	100	88.223	Microcebus_murinus
ENSMUSG00000028653	Trit1	100	91.649	ENSMOCG00000008173	Trit1	100	91.649	Microtus_ochrogaster
ENSMUSG00000028653	Trit1	88	59.569	ENSMMOG00000021140	trit1	94	59.569	Mola_mola
ENSMUSG00000028653	Trit1	93	77.727	ENSMODG00000017650	TRIT1	96	77.727	Monodelphis_domestica
ENSMUSG00000028653	Trit1	91	60.277	ENSMALG00000017843	trit1	93	58.916	Monopterus_albus
ENSMUSG00000028653	Trit1	100	99.143	MGP_CAROLIEiJ_G0026428	Trit1	100	99.143	Mus_caroli
ENSMUSG00000028653	Trit1	100	97.645	MGP_PahariEiJ_G0028758	Trit1	100	97.645	Mus_pahari
ENSMUSG00000028653	Trit1	100	99.358	MGP_SPRETEiJ_G0027408	Trit1	100	99.358	Mus_spretus
ENSMUSG00000028653	Trit1	100	88.889	ENSMPUG00000014291	TRIT1	100	88.889	Mustela_putorius_furo
ENSMUSG00000028653	Trit1	98	86.463	ENSMLUG00000000334	TRIT1	98	86.463	Myotis_lucifugus
ENSMUSG00000028653	Trit1	100	89.079	ENSNLEG00000012038	TRIT1	100	89.079	Nomascus_leucogenys
ENSMUSG00000028653	Trit1	95	69.595	ENSMEUG00000005217	TRIT1	95	69.595	Notamacropus_eugenii
ENSMUSG00000028653	Trit1	73	72.043	ENSOPRG00000003205	-	73	72.043	Ochotona_princeps
ENSMUSG00000028653	Trit1	100	83.227	ENSODEG00000006117	TRIT1	100	83.227	Octodon_degus
ENSMUSG00000028653	Trit1	94	60.310	ENSONIG00000015407	trit1	92	61.136	Oreochromis_niloticus
ENSMUSG00000028653	Trit1	79	77.151	ENSOANG00000002779	TRIT1	100	74.300	Ornithorhynchus_anatinus
ENSMUSG00000028653	Trit1	97	88.767	ENSOCUG00000002054	TRIT1	100	88.651	Oryctolagus_cuniculus
ENSMUSG00000028653	Trit1	93	62.500	ENSORLG00000005802	trit1	95	62.500	Oryzias_latipes
ENSMUSG00000028653	Trit1	93	61.959	ENSORLG00020005519	trit1	95	61.959	Oryzias_latipes_hni
ENSMUSG00000028653	Trit1	93	61.503	ENSORLG00015018715	trit1	95	61.503	Oryzias_latipes_hsok
ENSMUSG00000028653	Trit1	95	61.883	ENSOMEG00000006569	trit1	95	62.187	Oryzias_melastigma
ENSMUSG00000028653	Trit1	97	86.784	ENSOGAG00000009571	TRIT1	100	86.538	Otolemur_garnettii
ENSMUSG00000028653	Trit1	98	86.710	ENSOARG00000020140	TRIT1	98	86.710	Ovis_aries
ENSMUSG00000028653	Trit1	100	89.079	ENSPPAG00000023930	TRIT1	100	89.079	Pan_paniscus
ENSMUSG00000028653	Trit1	97	89.207	ENSPPRG00000009680	TRIT1	100	88.865	Panthera_pardus
ENSMUSG00000028653	Trit1	97	89.207	ENSPTIG00000021134	TRIT1	100	88.865	Panthera_tigris_altaica
ENSMUSG00000028653	Trit1	100	89.079	ENSPTRG00000000579	TRIT1	100	89.079	Pan_troglodytes
ENSMUSG00000028653	Trit1	100	87.794	ENSPANG00000018125	TRIT1	100	87.794	Papio_anubis
ENSMUSG00000028653	Trit1	79	59.838	ENSPKIG00000024527	trit1	95	59.838	Paramormyrops_kingsleyae
ENSMUSG00000028653	Trit1	77	57.895	ENSPSIG00000017073	TRIT1	99	57.895	Pelodiscus_sinensis
ENSMUSG00000028653	Trit1	84	61.929	ENSPMGG00000018445	trit1	95	61.929	Periophthalmus_magnuspinnatus
ENSMUSG00000028653	Trit1	100	92.719	ENSPEMG00000022418	Trit1	100	92.719	Peromyscus_maniculatus_bairdii
ENSMUSG00000028653	Trit1	83	59.148	ENSPMAG00000008892	trit1	100	59.148	Petromyzon_marinus
ENSMUSG00000028653	Trit1	92	79.587	ENSPCIG00000020666	TRIT1	94	82.927	Phascolarctos_cinereus
ENSMUSG00000028653	Trit1	96	59.251	ENSPFOG00000014626	trit1	96	59.251	Poecilia_formosa
ENSMUSG00000028653	Trit1	70	64.134	ENSPLAG00000011669	trit1	94	64.375	Poecilia_latipinna
ENSMUSG00000028653	Trit1	56	63.258	ENSPMEG00000023788	trit1	96	63.258	Poecilia_mexicana
ENSMUSG00000028653	Trit1	70	64.545	ENSPREG00000018182	trit1	90	65.723	Poecilia_reticulata
ENSMUSG00000028653	Trit1	100	88.223	ENSPPYG00000001499	TRIT1	100	88.223	Pongo_abelii
ENSMUSG00000028653	Trit1	78	72.652	ENSPCAG00000014680	TRIT1	100	72.652	Procavia_capensis
ENSMUSG00000028653	Trit1	97	88.300	ENSPCOG00000014150	TRIT1	99	88.147	Propithecus_coquereli
ENSMUSG00000028653	Trit1	97	77.483	ENSPVAG00000003344	TRIT1	100	77.088	Pteropus_vampyrus
ENSMUSG00000028653	Trit1	65	63.023	ENSPNYG00000001003	trit1	96	64.548	Pundamilia_nyererei
ENSMUSG00000028653	Trit1	88	61.800	ENSPNAG00000009466	trit1	88	65.130	Pygocentrus_nattereri
ENSMUSG00000028653	Trit1	100	90.229	ENSRNOG00000014274	Trit1	100	90.229	Rattus_norvegicus
ENSMUSG00000028653	Trit1	100	87.152	ENSRBIG00000043179	TRIT1	100	87.152	Rhinopithecus_bieti
ENSMUSG00000028653	Trit1	100	87.152	ENSRROG00000042670	TRIT1	100	87.152	Rhinopithecus_roxellana
ENSMUSG00000028653	Trit1	87	34.204	YOR274W	-	93	34.204	Saccharomyces_cerevisiae
ENSMUSG00000028653	Trit1	100	86.724	ENSSBOG00000024417	TRIT1	97	89.941	Saimiri_boliviensis_boliviensis
ENSMUSG00000028653	Trit1	88	75.779	ENSSHAG00000018363	TRIT1	99	75.779	Sarcophilus_harrisii
ENSMUSG00000028653	Trit1	88	61.707	ENSSFOG00015007284	trit1	81	61.707	Scleropages_formosus
ENSMUSG00000028653	Trit1	95	60.714	ENSSMAG00000020730	trit1	88	62.238	Scophthalmus_maximus
ENSMUSG00000028653	Trit1	91	61.201	ENSSDUG00000001683	trit1	87	62.291	Seriola_dumerili
ENSMUSG00000028653	Trit1	88	61.151	ENSSLDG00000008379	trit1	90	60.880	Seriola_lalandi_dorsalis
ENSMUSG00000028653	Trit1	97	83.117	ENSSARG00000004540	TRIT1	100	82.947	Sorex_araneus
ENSMUSG00000028653	Trit1	88	69.343	ENSSPUG00000003472	TRIT1	84	69.343	Sphenodon_punctatus
ENSMUSG00000028653	Trit1	87	63.835	ENSSPAG00000020745	trit1	89	64.838	Stegastes_partitus
ENSMUSG00000028653	Trit1	80	71.809	ENSTGUG00000001242	TRIT1	100	71.353	Taeniopygia_guttata
ENSMUSG00000028653	Trit1	96	59.778	ENSTRUG00000013936	trit1	95	61.201	Takifugu_rubripes
ENSMUSG00000028653	Trit1	91	60.930	ENSTNIG00000009240	trit1	92	61.557	Tetraodon_nigroviridis
ENSMUSG00000028653	Trit1	80	94.565	ENSTBEG00000001317	TRIT1	81	90.566	Tupaia_belangeri
ENSMUSG00000028653	Trit1	97	87.859	ENSTTRG00000005064	TRIT1	100	87.152	Tursiops_truncatus
ENSMUSG00000028653	Trit1	55	87.209	ENSUAMG00000000522	-	99	86.716	Ursus_americanus
ENSMUSG00000028653	Trit1	97	87.885	ENSUMAG00000017299	TRIT1	90	87.580	Ursus_maritimus
ENSMUSG00000028653	Trit1	98	82.533	ENSVPAG00000003008	TRIT1	98	82.533	Vicugna_pacos
ENSMUSG00000028653	Trit1	89	66.667	ENSXETG00000010952	trit1	92	66.667	Xenopus_tropicalis
ENSMUSG00000028653	Trit1	71	63.855	ENSXMAG00000016302	trit1	88	65.409	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0006400	tRNA modification	21873635.	IBA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0052381	tRNA dimethylallyltransferase activity	21873635.	IBA	Function
GO:0052381	tRNA dimethylallyltransferase activity	-	ISO	Function