EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028688 (Gene tree)
Gene ID: 68276
Gene Symbol: Toe1
Alias: 4930584N22Rik|4933424D16Rik
Full Name: target of EGR1%2C member 1 (nuclear)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 13331 bases
Position: chr4:116794310-116807640
Accession: 1915526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000030451	zf-CCCH	PF00642.24	0.00038	1	1
ENSMUSP00000030451	CAF1	PF04857.20	1.7e-87	1	2
ENSMUSP00000030451	CAF1	PF04857.20	1.7e-87	2	2
ENSMUSP00000102063	CAF1	PF04857.20	1.1e-79	1	2
ENSMUSP00000102063	CAF1	PF04857.20	1.1e-79	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000149895	-	659	-	-	- (aa)	-	-
ENSMUST00000154195	-	856	-	-	- (aa)	-	-
ENSMUST00000134612	-	780	-	-	- (aa)	-	-
ENSMUST00000030451	-	2090	XM_006503353	ENSMUSP00000030451	511 (aa)	XP_006503416	Q9D2E2
ENSMUST00000106455	-	1209	-	ENSMUSP00000102063	329 (aa)	-	Q9D2E2
ENSMUST00000146246	-	909	-	-	- (aa)	-	-
ENSMUST00000145468	-	1097	-	ENSMUSP00000117019	188 (aa)	-	F6ZMT3
ENSMUST00000154945	-	433	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028688	Toe1	98	95.652	ENSG00000132773	TOE1	100	81.605	Homo_sapiens
ENSMUSG00000028688	Toe1	98	69.730	ENSAPOG00000010450	toe1	97	49.602	Acanthochromis_polyacanthus
ENSMUSG00000028688	Toe1	98	96.196	ENSAMEG00000013576	TOE1	100	81.445	Ailuropoda_melanoleuca
ENSMUSG00000028688	Toe1	98	68.649	ENSACIG00000004175	toe1	97	50.916	Amphilophus_citrinellus
ENSMUSG00000028688	Toe1	98	69.730	ENSAOCG00000022922	toe1	97	48.842	Amphiprion_ocellaris
ENSMUSG00000028688	Toe1	98	69.730	ENSAPEG00000005572	toe1	98	48.671	Amphiprion_percula
ENSMUSG00000028688	Toe1	98	69.730	ENSATEG00000008973	toe1	97	50.984	Anabas_testudineus
ENSMUSG00000028688	Toe1	57	87.037	ENSAPLG00000007214	TOE1	96	63.115	Anas_platyrhynchos
ENSMUSG00000028688	Toe1	98	80.978	ENSACAG00000015161	TOE1	95	55.303	Anolis_carolinensis
ENSMUSG00000028688	Toe1	100	95.213	ENSANAG00000023815	-	98	89.600	Aotus_nancymaae
ENSMUSG00000028688	Toe1	100	70.117	ENSANAG00000032328	-	99	71.595	Aotus_nancymaae
ENSMUSG00000028688	Toe1	98	69.189	ENSACLG00000021437	toe1	97	47.917	Astatotilapia_calliptera
ENSMUSG00000028688	Toe1	98	69.565	ENSAMXG00000031029	toe1	95	51.429	Astyanax_mexicanus
ENSMUSG00000028688	Toe1	98	96.196	ENSBTAG00000011243	TOE1	100	80.952	Bos_taurus
ENSMUSG00000028688	Toe1	98	39.267	WBGene00013265	parn-2	67	34.118	Caenorhabditis_elegans
ENSMUSG00000028688	Toe1	98	96.739	ENSCJAG00000004716	TOE1	100	81.445	Callithrix_jacchus
ENSMUSG00000028688	Toe1	98	96.739	ENSCAFG00000004603	TOE1	100	82.387	Canis_familiaris
ENSMUSG00000028688	Toe1	98	96.739	ENSCAFG00020016716	TOE1	100	82.387	Canis_lupus_dingo
ENSMUSG00000028688	Toe1	98	96.196	ENSCHIG00000026678	TOE1	100	81.213	Capra_hircus
ENSMUSG00000028688	Toe1	100	95.213	ENSTSYG00000011320	TOE1	98	88.800	Carlito_syrichta
ENSMUSG00000028688	Toe1	64	95.868	ENSCAPG00000003952	TOE1	100	79.772	Cavia_aperea
ENSMUSG00000028688	Toe1	98	95.109	ENSCPOG00000036595	TOE1	100	79.256	Cavia_porcellus
ENSMUSG00000028688	Toe1	100	95.213	ENSCCAG00000030245	TOE1	98	89.200	Cebus_capucinus
ENSMUSG00000028688	Toe1	98	95.676	ENSCATG00000038458	TOE1	99	89.600	Cercocebus_atys
ENSMUSG00000028688	Toe1	98	96.739	ENSCLAG00000003906	TOE1	100	81.996	Chinchilla_lanigera
ENSMUSG00000028688	Toe1	98	95.652	ENSCSAG00000001213	TOE1	100	81.409	Chlorocebus_sabaeus
ENSMUSG00000028688	Toe1	98	95.109	ENSCHOG00000004270	TOE1	100	80.626	Choloepus_hoffmanni
ENSMUSG00000028688	Toe1	98	81.522	ENSCPBG00000005398	TOE1	95	59.952	Chrysemys_picta_bellii
ENSMUSG00000028688	Toe1	98	52.174	ENSCING00000003872	-	97	35.600	Ciona_intestinalis
ENSMUSG00000028688	Toe1	98	52.151	ENSCSAVG00000004594	-	96	35.438	Ciona_savignyi
ENSMUSG00000028688	Toe1	98	95.652	ENSCANG00000037540	TOE1	100	81.996	Colobus_angolensis_palliatus
ENSMUSG00000028688	Toe1	98	97.826	ENSCGRG00001022323	Toe1	100	90.802	Cricetulus_griseus_chok1gshd
ENSMUSG00000028688	Toe1	98	97.826	ENSCGRG00000004377	Toe1	100	90.411	Cricetulus_griseus_crigri
ENSMUSG00000028688	Toe1	98	68.108	ENSCSEG00000021445	toe1	97	47.399	Cynoglossus_semilaevis
ENSMUSG00000028688	Toe1	98	70.270	ENSCVAG00000006577	toe1	97	50.299	Cyprinodon_variegatus
ENSMUSG00000028688	Toe1	98	71.196	ENSDARG00000077544	toe1	96	53.236	Danio_rerio
ENSMUSG00000028688	Toe1	98	95.109	ENSDNOG00000015596	TOE1	97	79.297	Dasypus_novemcinctus
ENSMUSG00000028688	Toe1	98	96.739	ENSDORG00000007153	Toe1	100	81.996	Dipodomys_ordii
ENSMUSG00000028688	Toe1	98	91.848	ENSETEG00000013367	TOE1	100	77.530	Echinops_telfairi
ENSMUSG00000028688	Toe1	99	51.852	ENSEBUG00000000655	toe1	93	37.079	Eptatretus_burgeri
ENSMUSG00000028688	Toe1	98	94.565	ENSEASG00005004198	TOE1	97	73.973	Equus_asinus_asinus
ENSMUSG00000028688	Toe1	98	95.109	ENSECAG00000023204	TOE1	100	80.822	Equus_caballus
ENSMUSG00000028688	Toe1	98	96.739	ENSEEUG00000015402	TOE1	100	78.474	Erinaceus_europaeus
ENSMUSG00000028688	Toe1	98	71.739	ENSELUG00000012307	toe1	94	52.250	Esox_lucius
ENSMUSG00000028688	Toe1	98	96.196	ENSFCAG00000038191	TOE1	100	82.192	Felis_catus
ENSMUSG00000028688	Toe1	94	79.661	ENSFALG00000005017	TOE1	99	52.024	Ficedula_albicollis
ENSMUSG00000028688	Toe1	98	95.652	ENSFDAG00000019031	TOE1	100	80.822	Fukomys_damarensis
ENSMUSG00000028688	Toe1	98	69.189	ENSFHEG00000021893	toe1	97	49.518	Fundulus_heteroclitus
ENSMUSG00000028688	Toe1	98	70.811	ENSGMOG00000004656	toe1	97	51.695	Gadus_morhua
ENSMUSG00000028688	Toe1	98	78.804	ENSGALG00000010228	TOE1	98	54.023	Gallus_gallus
ENSMUSG00000028688	Toe1	98	69.730	ENSGAFG00000013948	toe1	97	50.295	Gambusia_affinis
ENSMUSG00000028688	Toe1	98	68.649	ENSGACG00000014339	toe1	93	58.596	Gasterosteus_aculeatus
ENSMUSG00000028688	Toe1	98	82.609	ENSGAGG00000023228	TOE1	97	54.000	Gopherus_agassizii
ENSMUSG00000028688	Toe1	100	95.213	ENSGGOG00000003290	TOE1	98	89.600	Gorilla_gorilla
ENSMUSG00000028688	Toe1	98	69.189	ENSHBUG00000012101	toe1	97	49.516	Haplochromis_burtoni
ENSMUSG00000028688	Toe1	98	94.565	ENSHGLG00000003603	TOE1	100	80.859	Heterocephalus_glaber_female
ENSMUSG00000028688	Toe1	98	94.565	ENSHGLG00100015361	TOE1	100	80.859	Heterocephalus_glaber_male
ENSMUSG00000028688	Toe1	98	70.270	ENSHCOG00000016394	toe1	97	49.795	Hippocampus_comes
ENSMUSG00000028688	Toe1	98	72.826	ENSIPUG00000002717	toe1	97	54.697	Ictalurus_punctatus
ENSMUSG00000028688	Toe1	98	95.109	ENSSTOG00000010669	TOE1	100	80.626	Ictidomys_tridecemlineatus
ENSMUSG00000028688	Toe1	98	94.022	ENSJJAG00000021743	Toe1	99	87.805	Jaculus_jaculus
ENSMUSG00000028688	Toe1	98	68.108	ENSKMAG00000020891	toe1	96	50.198	Kryptolebias_marmoratus
ENSMUSG00000028688	Toe1	98	69.189	ENSLBEG00000010456	toe1	97	49.903	Labrus_bergylta
ENSMUSG00000028688	Toe1	76	79.021	ENSLACG00000016268	-	100	79.021	Latimeria_chalumnae
ENSMUSG00000028688	Toe1	98	73.370	ENSLOCG00000002852	toe1	98	52.778	Lepisosteus_oculatus
ENSMUSG00000028688	Toe1	98	95.109	ENSLAFG00000017370	TOE1	100	80.039	Loxodonta_africana
ENSMUSG00000028688	Toe1	98	95.676	ENSMFAG00000042312	TOE1	99	89.600	Macaca_fascicularis
ENSMUSG00000028688	Toe1	98	95.652	ENSMMUG00000020081	TOE1	100	83.011	Macaca_mulatta
ENSMUSG00000028688	Toe1	98	95.652	ENSMNEG00000032131	TOE1	100	81.605	Macaca_nemestrina
ENSMUSG00000028688	Toe1	98	96.196	ENSMLEG00000028729	TOE1	100	81.605	Mandrillus_leucophaeus
ENSMUSG00000028688	Toe1	98	70.270	ENSMAMG00000015291	toe1	97	48.855	Mastacembelus_armatus
ENSMUSG00000028688	Toe1	98	69.189	ENSMZEG00005014305	toe1	97	47.917	Maylandia_zebra
ENSMUSG00000028688	Toe1	91	79.070	ENSMGAG00000010387	TOE1	99	57.014	Meleagris_gallopavo
ENSMUSG00000028688	Toe1	98	97.283	ENSMAUG00000022118	Toe1	100	89.824	Mesocricetus_auratus
ENSMUSG00000028688	Toe1	98	94.565	ENSMICG00000047305	-	100	79.020	Microcebus_murinus
ENSMUSG00000028688	Toe1	98	76.087	ENSMICG00000032375	-	93	73.639	Microcebus_murinus
ENSMUSG00000028688	Toe1	98	98.370	ENSMOCG00000012917	Toe1	100	89.453	Microtus_ochrogaster
ENSMUSG00000028688	Toe1	90	67.251	ENSMMOG00000020894	toe1	96	48.626	Mola_mola
ENSMUSG00000028688	Toe1	98	82.609	ENSMODG00000002430	TOE1	98	65.975	Monodelphis_domestica
ENSMUSG00000028688	Toe1	98	70.270	ENSMALG00000010017	toe1	97	47.985	Monopterus_albus
ENSMUSG00000028688	Toe1	100	97.872	MGP_CAROLIEiJ_G0026342	Toe1	100	97.872	Mus_caroli
ENSMUSG00000028688	Toe1	100	99.468	MGP_PahariEiJ_G0028674	Toe1	100	99.468	Mus_pahari
ENSMUSG00000028688	Toe1	100	98.936	MGP_SPRETEiJ_G0027314	Toe1	100	98.936	Mus_spretus
ENSMUSG00000028688	Toe1	98	96.739	ENSMPUG00000013123	TOE1	100	80.312	Mustela_putorius_furo
ENSMUSG00000028688	Toe1	98	95.652	ENSMLUG00000005649	TOE1	100	81.018	Myotis_lucifugus
ENSMUSG00000028688	Toe1	98	69.189	ENSNBRG00000019107	toe1	97	51.738	Neolamprologus_brichardi
ENSMUSG00000028688	Toe1	100	94.681	ENSNLEG00000014383	TOE1	98	89.200	Nomascus_leucogenys
ENSMUSG00000028688	Toe1	82	84.516	ENSMEUG00000000629	-	86	84.516	Notamacropus_eugenii
ENSMUSG00000028688	Toe1	98	95.109	ENSOPRG00000004057	TOE1	100	80.235	Ochotona_princeps
ENSMUSG00000028688	Toe1	98	96.196	ENSODEG00000008239	TOE1	100	81.018	Octodon_degus
ENSMUSG00000028688	Toe1	98	68.649	ENSONIG00000009053	toe1	97	48.479	Oreochromis_niloticus
ENSMUSG00000028688	Toe1	97	53.663	ENSOANG00000011797	-	94	54.244	Ornithorhynchus_anatinus
ENSMUSG00000028688	Toe1	98	94.565	ENSOCUG00000017503	TOE1	100	81.213	Oryctolagus_cuniculus
ENSMUSG00000028688	Toe1	98	69.189	ENSORLG00000012609	toe1	97	48.228	Oryzias_latipes
ENSMUSG00000028688	Toe1	98	69.189	ENSORLG00020006441	toe1	97	48.814	Oryzias_latipes_hni
ENSMUSG00000028688	Toe1	98	69.189	ENSORLG00015001476	toe1	97	48.310	Oryzias_latipes_hsok
ENSMUSG00000028688	Toe1	98	68.108	ENSOMEG00000014153	toe1	97	48.310	Oryzias_melastigma
ENSMUSG00000028688	Toe1	81	94.771	ENSOGAG00000002298	-	100	85.388	Otolemur_garnettii
ENSMUSG00000028688	Toe1	97	76.374	ENSOGAG00000032761	-	100	58.333	Otolemur_garnettii
ENSMUSG00000028688	Toe1	98	96.196	ENSOARG00000001561	TOE1	100	80.381	Ovis_aries
ENSMUSG00000028688	Toe1	100	95.213	ENSPPAG00000043315	TOE1	98	89.600	Pan_paniscus
ENSMUSG00000028688	Toe1	98	96.196	ENSPPRG00000011880	TOE1	100	82.583	Panthera_pardus
ENSMUSG00000028688	Toe1	98	96.196	ENSPTIG00000008086	TOE1	100	82.583	Panthera_tigris_altaica
ENSMUSG00000028688	Toe1	100	95.213	ENSPTRG00000000672	TOE1	98	89.600	Pan_troglodytes
ENSMUSG00000028688	Toe1	98	95.652	ENSPANG00000012549	TOE1	98	81.605	Papio_anubis
ENSMUSG00000028688	Toe1	98	72.973	ENSPKIG00000010811	toe1	94	50.737	Paramormyrops_kingsleyae
ENSMUSG00000028688	Toe1	98	83.152	ENSPSIG00000010299	TOE1	96	73.529	Pelodiscus_sinensis
ENSMUSG00000028688	Toe1	98	70.811	ENSPMGG00000020389	toe1	97	51.224	Periophthalmus_magnuspinnatus
ENSMUSG00000028688	Toe1	98	98.370	ENSPEMG00000021892	Toe1	100	90.802	Peromyscus_maniculatus_bairdii
ENSMUSG00000028688	Toe1	98	57.838	ENSPMAG00000004794	toe1	96	42.745	Petromyzon_marinus
ENSMUSG00000028688	Toe1	98	82.065	ENSPCIG00000027569	TOE1	97	65.714	Phascolarctos_cinereus
ENSMUSG00000028688	Toe1	98	69.189	ENSPFOG00000019517	toe1	97	49.902	Poecilia_formosa
ENSMUSG00000028688	Toe1	98	69.730	ENSPLAG00000018228	toe1	97	49.119	Poecilia_latipinna
ENSMUSG00000028688	Toe1	98	69.189	ENSPMEG00000019956	toe1	97	49.511	Poecilia_mexicana
ENSMUSG00000028688	Toe1	98	95.652	ENSPPYG00000001414	TOE1	100	81.996	Pongo_abelii
ENSMUSG00000028688	Toe1	98	95.652	ENSPCAG00000013351	TOE1	100	79.452	Procavia_capensis
ENSMUSG00000028688	Toe1	100	96.277	ENSPCOG00000000982	TOE1	98	87.200	Propithecus_coquereli
ENSMUSG00000028688	Toe1	98	96.739	ENSPVAG00000014998	TOE1	99	74.498	Pteropus_vampyrus
ENSMUSG00000028688	Toe1	98	69.189	ENSPNYG00000019914	toe1	97	47.917	Pundamilia_nyererei
ENSMUSG00000028688	Toe1	98	71.196	ENSPNAG00000021933	toe1	96	51.534	Pygocentrus_nattereri
ENSMUSG00000028688	Toe1	98	97.826	ENSRNOG00000017561	Toe1	98	94.832	Rattus_norvegicus
ENSMUSG00000028688	Toe1	98	95.135	ENSRBIG00000031463	TOE1	99	89.200	Rhinopithecus_bieti
ENSMUSG00000028688	Toe1	98	95.135	ENSRROG00000026371	TOE1	99	89.200	Rhinopithecus_roxellana
ENSMUSG00000028688	Toe1	100	95.213	ENSSBOG00000026044	-	98	89.600	Saimiri_boliviensis_boliviensis
ENSMUSG00000028688	Toe1	93	82.286	ENSSBOG00000032639	-	98	72.070	Saimiri_boliviensis_boliviensis
ENSMUSG00000028688	Toe1	98	83.696	ENSSHAG00000010201	TOE1	97	65.844	Sarcophilus_harrisii
ENSMUSG00000028688	Toe1	98	72.283	ENSSFOG00015021182	toe1	95	54.262	Scleropages_formosus
ENSMUSG00000028688	Toe1	81	64.706	ENSSMAG00000015336	toe1	90	57.214	Scophthalmus_maximus
ENSMUSG00000028688	Toe1	74	68.794	ENSSMAG00000015322	toe1	83	45.434	Scophthalmus_maximus
ENSMUSG00000028688	Toe1	98	69.730	ENSSDUG00000013278	toe1	97	48.544	Seriola_dumerili
ENSMUSG00000028688	Toe1	98	69.730	ENSSLDG00000021979	toe1	97	49.323	Seriola_lalandi_dorsalis
ENSMUSG00000028688	Toe1	98	79.891	ENSSPUG00000003464	TOE1	98	56.571	Sphenodon_punctatus
ENSMUSG00000028688	Toe1	98	69.730	ENSSPAG00000009490	toe1	97	48.456	Stegastes_partitus
ENSMUSG00000028688	Toe1	98	95.109	ENSSSCG00000003918	TOE1	99	78.711	Sus_scrofa
ENSMUSG00000028688	Toe1	95	68.715	ENSTGUG00000007927	TOE1	99	52.965	Taeniopygia_guttata
ENSMUSG00000028688	Toe1	98	68.649	ENSTRUG00000025603	toe1	97	51.245	Takifugu_rubripes
ENSMUSG00000028688	Toe1	98	70.811	ENSTNIG00000017614	toe1	98	51.797	Tetraodon_nigroviridis
ENSMUSG00000028688	Toe1	98	96.739	ENSTBEG00000017625	TOE1	78	87.213	Tupaia_belangeri
ENSMUSG00000028688	Toe1	98	96.196	ENSTTRG00000008815	TOE1	100	81.800	Tursiops_truncatus
ENSMUSG00000028688	Toe1	98	96.196	ENSUAMG00000017724	TOE1	100	81.605	Ursus_americanus
ENSMUSG00000028688	Toe1	98	96.196	ENSUMAG00000024253	TOE1	100	83.441	Ursus_maritimus
ENSMUSG00000028688	Toe1	98	96.739	ENSVPAG00000011731	TOE1	100	82.387	Vicugna_pacos
ENSMUSG00000028688	Toe1	98	97.283	ENSVVUG00000007469	TOE1	91	83.806	Vulpes_vulpes
ENSMUSG00000028688	Toe1	98	73.370	ENSXETG00000003534	toe1	97	52.569	Xenopus_tropicalis
ENSMUSG00000028688	Toe1	98	69.730	ENSXCOG00000007796	toe1	97	50.199	Xiphophorus_couchianus
ENSMUSG00000028688	Toe1	98	69.730	ENSXMAG00000011102	toe1	97	49.902	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000175	3'-5'-exoribonuclease activity	21873635.	IBA	Function
GO:0000175	3'-5'-exoribonuclease activity	-	ISO	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004535	poly(A)-specific ribonuclease activity	-	ISO	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0015030	Cajal body	21873635.	IBA	Component
GO:0015030	Cajal body	-	ISO	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0017069	snRNA binding	21873635.	IBA	Function
GO:0017069	snRNA binding	-	ISO	Function
GO:0034472	snRNA 3'-end processing	21873635.	IBA	Process
GO:0034472	snRNA 3'-end processing	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	-	ISO	Process