EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028745 (Gene tree)
Gene ID: 12345
Gene Symbol: Capzb
Alias: 1700120C01Rik|CPB1|CPB2|CPbeta1|CPbeta2|Cappb1
Full Name: capping protein (actin filament) muscle Z-line%2C beta
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 98920
Position: chr4: 139192899-139291818
Accession: 104652
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000042675	-	1604	-	ENSMUSP00000038011	260 (aa)	-	A2AMW0
ENSMUST00000138045	-	730	-	ENSMUSP00000122077	204 (aa)	-	F7CAZ6
ENSMUST00000102508	-	1674	-	ENSMUSP00000099566	272 (aa)	-	P47757
ENSMUST00000131912	-	669	-	ENSMUSP00000114973	188 (aa)	-	F6YHZ8
ENSMUST00000030518	-	1390	XM_006538504	ENSMUSP00000030518	301 (aa)	XP_006538567	P47757
ENSMUST00000102507	-	1702	-	ENSMUSP00000099565	277 (aa)	-	P47757
ENSMUST00000145368	-	388	-	ENSMUSP00000119252	109 (aa)	-	A0A0A0MQI9
ENSMUST00000150077	-	1559	-	-	- (aa)	-	-
ENSMUST00000132385	-	498	-	-	- (aa)	-	-
ENSMUST00000156760	-	632	-	-	- (aa)	-	-
ENSMUST00000131793	-	353	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028745's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028745's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028745	Capzb	100	100.000	ENSG00000077549	CAPZB	100	100.000	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000902	cell morphogenesis	21873635.	IBA	Process
GO:0001669	acrosomal vesicle	19341723.	IDA	Component
GO:0003779	actin binding	-	ISO	Function
GO:0005515	protein binding	15850461.19806181.22553210.	IPI	Function
GO:0005515	protein binding	11604420.	IPI	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005903	brush border	22114352.	IDA	Component
GO:0007010	cytoskeleton organization	-	ISO	Process
GO:0008290	F-actin capping protein complex	21873635.	IBA	Component
GO:0008290	F-actin capping protein complex	11604420.	IDA	Component
GO:0008290	F-actin capping protein complex	19806181.	IPI	Component
GO:0010591	regulation of lamellipodium assembly	21873635.	IBA	Process
GO:0014069	postsynaptic density	20545768.	IDA	Component
GO:0014704	intercalated disc	10601341.	IDA	Component
GO:0014704	intercalated disc	7929588.	ISA	Component
GO:0016020	membrane	18723693.	IDA	Component
GO:0022604	regulation of cell morphogenesis	-	ISO	Process
GO:0030018	Z disc	10601341.	IDA	Component
GO:0030018	Z disc	7929588.	ISA	Component
GO:0030027	lamellipodium	15294161.	IDA	Component
GO:0030030	cell projection organization	15294161.	IMP	Process
GO:0030032	lamellipodium assembly	15294161.19806181.	IMP	Process
GO:0030036	actin cytoskeleton organization	-	IEA	Process
GO:0030863	cortical cytoskeleton	18723693.	IDA	Component
GO:0031115	negative regulation of microtubule polymerization	19806181.	IDA	Process
GO:0031175	neuron projection development	19806181.	IMP	Process
GO:0032279	asymmetric synapse	20545768.	IDA	Component
GO:0043025	neuronal cell body	-	ISO	Component
GO:0043197	dendritic spine	-	ISO	Component
GO:0048487	beta-tubulin binding	19806181.	IPI	Function
GO:0048747	muscle fiber development	10601341.	IMP	Process
GO:0051015	actin filament binding	21873635.	IBA	Function
GO:0051015	actin filament binding	17656356.	IDA	Function
GO:0051016	barbed-end actin filament capping	21873635.	IBA	Process
GO:0051016	barbed-end actin filament capping	17656356.	IDA	Process
GO:0051490	negative regulation of filopodium assembly	21873635.	IBA	Process
GO:0051693	actin filament capping	-	IEA	Process
GO:0071203	WASH complex	-	ISO	Component
GO:0090036	regulation of protein kinase C signaling	12089068.	IMP	Process
GO:0098685	Schaffer collateral - CA1 synapse	20545768.	IDA	Component
GO:0098686	hippocampal mossy fiber to CA3 synapse	20545768.	IDA	Component