EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028759 (Gene tree)
Gene ID: 15441
Gene Symbol: Hp1bp3
Alias: Hp1bp74
Full Name: heterochromatin protein 1%2C binding protein 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 28388
Position: chr4: 138216296-138244683
Accession: 109369
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000124305	-	620	-	ENSMUSP00000120587	165 (aa)	-	A2AM62
ENSMUST00000155344	-	568	-	-	- (aa)	-	-
ENSMUST00000097836	-	3113	XM_006538565	ENSMUSP00000095447	516 (aa)	XP_006538628	Q3TEA8
ENSMUST00000165861	-	3361	-	ENSMUSP00000132614	554 (aa)	-	Q3TEA8
ENSMUST00000137851	-	810	-	ENSMUSP00000118913	208 (aa)	-	A2AM63
ENSMUST00000105825	-	4618	-	ENSMUSP00000101451	516 (aa)	-	Z4YKA3
ENSMUST00000130071	-	446	-	ENSMUSP00000123467	85 (aa)	-	A2AM69
ENSMUST00000137865	-	669	-	ENSMUSP00000117216	150 (aa)	-	A2AM70
ENSMUST00000148681	-	913	-	ENSMUSP00000122005	292 (aa)	-	A2AM65
ENSMUST00000030541	-	3311	XM_006538568	ENSMUSP00000030541	554 (aa)	XP_006538631	Q3TEA8
ENSMUST00000154581	-	3444	-	-	- (aa)	-	-
ENSMUST00000105827	-	5155	-	ENSMUSP00000101453	554 (aa)	-	Z4YKB8
ENSMUST00000105826	-	3348	-	ENSMUSP00000101452	554 (aa)	-	Z4YKB8
ENSMUST00000142420	-	396	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028759's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028759's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028759	Hp1bp3	100	91.765	ENSG00000127483	HP1BP3	100	94.737	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000786	nucleosome	-	IEA	Component
GO:0003677	DNA binding	-	ISO	Function
GO:0003682	chromatin binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005694	chromosome	-	ISO	Component
GO:0006334	nucleosome assembly	-	IEA	Process
GO:0006355	regulation of transcription, DNA-templated	-	ISO	Process
GO:0016607	nuclear speck	-	ISO	Component
GO:0031491	nucleosome binding	-	ISO	Function
GO:0042127	regulation of cell proliferation	-	ISO	Process
GO:0070828	heterochromatin organization	-	ISO	Process
GO:0071456	cellular response to hypoxia	-	ISO	Process
GO:0097298	regulation of nucleus size	-	ISO	Process