EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028763 (Gene tree)
Gene ID: 15530
Gene Symbol: Hspg2
Alias: Pcn|Plc|per|perlecan
Full Name: perlecan (heparan sulfate proteoglycan 2)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 101862
Position: chr4: 137468769-137570630
Accession: 96257
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000155648	-	820	-	-	- (aa)	-	-
ENSMUST00000171332	-	14176	-	ENSMUSP00000131316	4383 (aa)	-	E9PZ16
ENSMUST00000030547	-	14187	XM_006538573	ENSMUSP00000030547	4375 (aa)	XP_006538636	B1B0C7

Gene Model

Click here to download ENSMUSG00000028763's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04512	ECM-receptor interaction	KEGG
mmu05161	Hepatitis B	KEGG
mmu05205	Proteoglycans in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028763's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001525	angiogenesis	-	IEA	Process
GO:0001958	endochondral ossification	10579729.	IMP	Process
GO:0002020	protease binding	22952693.	IPI	Function
GO:0002062	chondrocyte differentiation	10545953.	IMP	Process
GO:0005509	calcium ion binding	-	IEA	Function
GO:0005515	protein binding	12243745.16407285.22952693.	IPI	Function
GO:0005576	extracellular region	-	IEA	Component
GO:0005604	basement membrane	7670489.10352025.10579729.11787818.11802174.12588956.15381701.15895400.15928325.18757743.	IDA	Component
GO:0005615	extracellular space	24006456.	HDA	Component
GO:0006898	receptor-mediated endocytosis	21289173.	IGI	Process
GO:0006898	receptor-mediated endocytosis	21289173.	IMP	Process
GO:0007420	brain development	10579729.	IMP	Process
GO:0008022	protein C-terminus binding	-	ISO	Function
GO:0008104	protein localization	11802174.	IMP	Process
GO:0030021	extracellular matrix structural constituent conferring compression resistance	22159717.28071719.	IEA	Function
GO:0030021	extracellular matrix structural constituent conferring compression resistance	22159717.28071719.	RCA	Function
GO:0030198	extracellular matrix organization	10579729.	IMP	Process
GO:0031012	extracellular matrix	10579729.15381701.16407285.23217742.	IDA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0048704	embryonic skeletal system morphogenesis	10579729.	IMP	Process
GO:0048738	cardiac muscle tissue development	10579729.	IMP	Process
GO:0060351	cartilage development involved in endochondral bone morphogenesis	10545953.	IMP	Process
GO:0062023	collagen-containing extracellular matrix	22159717.23658023.28071719.	HDA	Component