EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028798 (Gene tree)
Gene ID: 54709
Gene Symbol: Eif3i
Alias: 36kDa|D4Ertd632e|Eif3s2|TRIP-1
Full Name: eukaryotic translation initiation factor 3%2C subunit I
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 8689
Position: chr4: 129591960-129600648
Accession: 1860763
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000135055	-	734	-	ENSMUSP00000120776	165 (aa)	-	A2AE03
ENSMUST00000102593	-	1123	-	ENSMUSP00000099653	325 (aa)	-	Q9QZD9
ENSMUST00000155428	-	401	-	-	- (aa)	-	-
ENSMUST00000143384	-	2323	-	-	- (aa)	-	-
ENSMUST00000136843	-	797	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028798's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028798's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028798	Eif3i	99	60.429	FBgn0015834	eIF3i	100	60.429	Drosophila_melanogaster
ENSMUSG00000028798	Eif3i	100	99.385	ENSG00000084623	EIF3I	100	100.000	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003743	translation initiation factor activity	17581632.	IDA	Function
GO:0003743	translation initiation factor activity	-	ISO	Function
GO:0003743	translation initiation factor activity	-	ISO	Function
GO:0005515	protein binding	16541103.	IPI	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	17581632.	IDA	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	-	ISO	Component
GO:0006412	translation	-	IEA	Process
GO:0006413	translational initiation	17581632.	IDA	Process
GO:0006413	translational initiation	-	ISO	Process
GO:0019899	enzyme binding	-	ISO	Function
GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m	24003236.	IDA	Component