EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028832 (Gene tree)
Gene ID: 16765
Gene Symbol: Stmn1
Alias: 19K|Lag|Lap18|PP17|PP18|PR22|SMN|leukemia associated phosphoprotein p18|metablastin|oncoprotein18|op18|p18|p19|pig|prosolin
Full Name: stathmin 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 5524
Position: chr4: 134468320-134473843
Accession: 96739
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000127279	-	474	-	ENSMUSP00000119547	102 (aa)	-	D3Z1Z8
ENSMUST00000030636	-	1060	-	ENSMUSP00000030636	149 (aa)	-	P54227
ENSMUST00000105868	-	967	-	ENSMUSP00000101494	149 (aa)	-	P54227
ENSMUST00000105867	-	802	-	ENSMUSP00000101493	147 (aa)	-	D3Z5N2
ENSMUST00000130253	-	612	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028832's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04010	MAPK signaling pathway	KEGG
mmu05206	MicroRNAs in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028832's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028832	Stmn1	88	38.462	FBgn0266521	stai	50	36.434	Drosophila_melanogaster

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000281	mitotic cytokinesis	25122120.	IGI	Process
GO:0000281	mitotic cytokinesis	-	ISO	Process
GO:0005515	protein binding	7724523.15652749.	IPI	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	10369391.	IDA	Component
GO:0005829	cytosol	10712642.	IDA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005874	microtubule	-	IEA	Component
GO:0007019	microtubule depolymerization	21873635.	IBA	Process
GO:0007019	microtubule depolymerization	-	ISO	Process
GO:0007052	mitotic spindle organization	-	ISO	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007399	nervous system development	-	IEA	Process
GO:0007409	axonogenesis	11839567.	IMP	Process
GO:0015631	tubulin binding	21873635.	IBA	Function
GO:0015631	tubulin binding	-	ISO	Function
GO:0016020	membrane	10712642.	IDA	Component
GO:0030154	cell differentiation	-	IEA	Process
GO:0031110	regulation of microtubule polymerization or depolymerization	21873635.	IBA	Process
GO:0031110	regulation of microtubule polymerization or depolymerization	-	ISO	Process
GO:0031115	negative regulation of microtubule polymerization	15652749.	IDA	Process
GO:0031115	negative regulation of microtubule polymerization	-	ISO	Process
GO:0031175	neuron projection development	21873635.	IBA	Process
GO:0035024	negative regulation of Rho protein signal transduction	-	ISO	Process
GO:0043005	neuron projection	21873635.	IBA	Component
GO:0048012	hepatocyte growth factor receptor signaling pathway	-	ISO	Process
GO:0051272	positive regulation of cellular component movement	15652749.	IGI	Process
GO:0051493	regulation of cytoskeleton organization	21873635.	IBA	Process
GO:0051497	negative regulation of stress fiber assembly	-	ISO	Process
GO:0061436	establishment of skin barrier	-	ISO	Process
GO:0070495	negative regulation of thrombin-activated receptor signaling pathway	-	ISO	Process
GO:1905098	negative regulation of guanyl-nucleotide exchange factor activity	-	ISO	Process