EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028851 (Gene tree)
Gene ID: 18221
Gene Symbol: Nudc
Alias: NudC|Silg92
Full Name: nudC nuclear distribution protein
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 13455
Position: chr4: 133532542-133545996
Accession: 106014
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000030665	-	1316	-	ENSMUSP00000030665	332 (aa)	-	O35685
ENSMUST00000148612	-	641	-	-	- (aa)	-	-
ENSMUST00000141860	-	204	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000028851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028851's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028851	Nudc	98	51.020	FBgn0021768	nudC	99	50.729	Drosophila_melanogaster
ENSMUSG00000028851	Nudc	100	91.867	ENSG00000090273	NUDC	100	92.169	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	11163258.17555748.20019668.23055941.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005874	microtubule	-	IEA	Component
GO:0006457	protein folding	21873635.	IBA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0007097	nuclear migration	-	ISO	Process
GO:0032502	developmental process	21873635.	IBA	Process
GO:0051082	unfolded protein binding	21873635.	IBA	Function
GO:0051301	cell division	-	IEA	Process