EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028907 (Gene tree)
Gene ID: 67205
Gene Symbol: Utp11
Alias: 2700082D03Rik|Utp11l
Full Name: UTP11 small subunit processome component
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 15441 bases
Position: chr4:124678160-124693600
Accession: 1914455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000030738	Utp11	PF03998.13	1.4e-72	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000153088	-	4008	-	-	- (aa)	-	-
ENSMUST00000030738	-	1603	XM_011240592	ENSMUSP00000030738	253 (aa)	XP_011238894	Q9CZJ1

Gene Model

Click here to download ENSMUSG00000028907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028907	Utp11	100	90.514	ENSG00000183520	UTP11	100	90.514	Homo_sapiens
ENSMUSG00000028907	Utp11	99	66.798	ENSAPOG00000024525	utp11l	99	67.984	Acanthochromis_polyacanthus
ENSMUSG00000028907	Utp11	100	87.747	ENSAMEG00000001308	UTP11	100	87.747	Ailuropoda_melanoleuca
ENSMUSG00000028907	Utp11	99	61.265	ENSACIG00000018523	utp11l	99	62.846	Amphilophus_citrinellus
ENSMUSG00000028907	Utp11	99	67.589	ENSAOCG00000010085	utp11l	99	67.589	Amphiprion_ocellaris
ENSMUSG00000028907	Utp11	99	67.194	ENSAPEG00000005214	utp11l	99	67.194	Amphiprion_percula
ENSMUSG00000028907	Utp11	99	67.194	ENSATEG00000009240	utp11l	99	67.194	Anabas_testudineus
ENSMUSG00000028907	Utp11	84	73.709	ENSAPLG00000014597	UTP11	100	73.709	Anas_platyrhynchos
ENSMUSG00000028907	Utp11	55	66.906	ENSACAG00000017024	UTP11	100	66.906	Anolis_carolinensis
ENSMUSG00000028907	Utp11	95	86.722	ENSANAG00000022223	UTP11	88	86.722	Aotus_nancymaae
ENSMUSG00000028907	Utp11	99	67.984	ENSACLG00000000339	utp11l	99	67.984	Astatotilapia_calliptera
ENSMUSG00000028907	Utp11	99	64.286	ENSAMXG00000039671	utp11l	99	64.286	Astyanax_mexicanus
ENSMUSG00000028907	Utp11	100	87.747	ENSBTAG00000002306	UTP11	100	87.747	Bos_taurus
ENSMUSG00000028907	Utp11	95	37.600	WBGene00007623	C16C10.2	95	37.600	Caenorhabditis_elegans
ENSMUSG00000028907	Utp11	100	89.328	ENSCJAG00000002244	UTP11	100	89.328	Callithrix_jacchus
ENSMUSG00000028907	Utp11	100	86.957	ENSCAFG00000003202	UTP11	100	86.957	Canis_familiaris
ENSMUSG00000028907	Utp11	100	86.957	ENSCAFG00020006177	UTP11	100	86.957	Canis_lupus_dingo
ENSMUSG00000028907	Utp11	100	87.352	ENSCHIG00000008534	UTP11	100	87.352	Capra_hircus
ENSMUSG00000028907	Utp11	75	85.864	ENSTSYG00000005370	UTP11	82	85.864	Carlito_syrichta
ENSMUSG00000028907	Utp11	94	80.591	ENSCAPG00000012976	UTP11	96	80.591	Cavia_aperea
ENSMUSG00000028907	Utp11	100	87.747	ENSCPOG00000001043	UTP11	100	87.747	Cavia_porcellus
ENSMUSG00000028907	Utp11	96	71.193	ENSCCAG00000025931	-	100	77.174	Cebus_capucinus
ENSMUSG00000028907	Utp11	100	89.328	ENSCCAG00000034131	-	100	89.328	Cebus_capucinus
ENSMUSG00000028907	Utp11	100	76.471	ENSCATG00000042680	UTP11	100	76.471	Cercocebus_atys
ENSMUSG00000028907	Utp11	100	88.538	ENSCLAG00000012521	UTP11	100	88.538	Chinchilla_lanigera
ENSMUSG00000028907	Utp11	100	90.909	ENSCSAG00000001122	UTP11	100	90.909	Chlorocebus_sabaeus
ENSMUSG00000028907	Utp11	92	70.690	ENSCHOG00000012493	UTP11	100	70.690	Choloepus_hoffmanni
ENSMUSG00000028907	Utp11	92	76.496	ENSCPBG00000018279	UTP11	99	76.496	Chrysemys_picta_bellii
ENSMUSG00000028907	Utp11	99	40.000	ENSCING00000021175	-	99	40.000	Ciona_intestinalis
ENSMUSG00000028907	Utp11	99	38.039	ENSCSAVG00000011594	-	99	38.039	Ciona_savignyi
ENSMUSG00000028907	Utp11	100	78.656	ENSCANG00000043119	UTP11	100	78.656	Colobus_angolensis_palliatus
ENSMUSG00000028907	Utp11	100	94.862	ENSCGRG00001024839	Utp11	100	94.862	Cricetulus_griseus_chok1gshd
ENSMUSG00000028907	Utp11	100	94.862	ENSCGRG00000017523	Utp11	100	94.862	Cricetulus_griseus_crigri
ENSMUSG00000028907	Utp11	99	67.984	ENSCSEG00000020281	utp11l	99	68.775	Cynoglossus_semilaevis
ENSMUSG00000028907	Utp11	55	60.432	ENSCVAG00000000900	utp11l	88	60.432	Cyprinodon_variegatus
ENSMUSG00000028907	Utp11	99	63.745	ENSDARG00000039958	utp11l	99	63.745	Danio_rerio
ENSMUSG00000028907	Utp11	100	85.771	ENSDNOG00000035776	UTP11	100	85.771	Dasypus_novemcinctus
ENSMUSG00000028907	Utp11	92	87.124	ENSDORG00000005348	Utp11	100	87.204	Dipodomys_ordii
ENSMUSG00000028907	Utp11	99	37.795	FBgn0030063	CG1789	99	38.583	Drosophila_melanogaster
ENSMUSG00000028907	Utp11	100	81.423	ENSETEG00000009665	UTP11	100	81.423	Echinops_telfairi
ENSMUSG00000028907	Utp11	99	56.175	ENSEBUG00000008113	utp11l	99	56.175	Eptatretus_burgeri
ENSMUSG00000028907	Utp11	100	88.538	ENSEASG00005013277	UTP11	100	88.538	Equus_asinus_asinus
ENSMUSG00000028907	Utp11	100	88.142	ENSECAG00000021551	UTP11	100	88.142	Equus_caballus
ENSMUSG00000028907	Utp11	60	86.486	ENSEEUG00000009447	-	67	86.486	Erinaceus_europaeus
ENSMUSG00000028907	Utp11	99	63.386	ENSELUG00000017361	utp11l	83	63.386	Esox_lucius
ENSMUSG00000028907	Utp11	100	88.142	ENSFCAG00000011023	UTP11	100	88.142	Felis_catus
ENSMUSG00000028907	Utp11	92	68.534	ENSFALG00000001026	UTP11	100	68.534	Ficedula_albicollis
ENSMUSG00000028907	Utp11	100	87.747	ENSFDAG00000015582	UTP11	100	87.747	Fukomys_damarensis
ENSMUSG00000028907	Utp11	99	66.534	ENSFHEG00000018357	utp11l	99	66.534	Fundulus_heteroclitus
ENSMUSG00000028907	Utp11	99	57.937	ENSGMOG00000006896	utp11l	99	57.937	Gadus_morhua
ENSMUSG00000028907	Utp11	100	74.704	ENSGALG00000001502	UTP11	100	74.704	Gallus_gallus
ENSMUSG00000028907	Utp11	99	64.940	ENSGAFG00000008883	utp11l	99	64.940	Gambusia_affinis
ENSMUSG00000028907	Utp11	99	61.660	ENSGACG00000013680	utp11l	99	62.846	Gasterosteus_aculeatus
ENSMUSG00000028907	Utp11	100	75.099	ENSGAGG00000014985	UTP11	84	75.099	Gopherus_agassizii
ENSMUSG00000028907	Utp11	100	90.119	ENSGGOG00000022705	UTP11	100	90.119	Gorilla_gorilla
ENSMUSG00000028907	Utp11	99	68.379	ENSHBUG00000009895	utp11l	99	68.379	Haplochromis_burtoni
ENSMUSG00000028907	Utp11	100	88.142	ENSHGLG00000014499	UTP11L	100	88.142	Heterocephalus_glaber_female
ENSMUSG00000028907	Utp11	100	88.142	ENSHGLG00100011557	UTP11L	100	88.142	Heterocephalus_glaber_male
ENSMUSG00000028907	Utp11	99	63.137	ENSHCOG00000005969	utp11l	99	63.137	Hippocampus_comes
ENSMUSG00000028907	Utp11	99	64.143	ENSIPUG00000017174	utp11	99	64.143	Ictalurus_punctatus
ENSMUSG00000028907	Utp11	100	90.909	ENSSTOG00000022805	UTP11	100	90.909	Ictidomys_tridecemlineatus
ENSMUSG00000028907	Utp11	100	90.514	ENSJJAG00000024043	Utp11	100	90.514	Jaculus_jaculus
ENSMUSG00000028907	Utp11	99	66.667	ENSKMAG00000018988	utp11l	99	66.667	Kryptolebias_marmoratus
ENSMUSG00000028907	Utp11	99	65.217	ENSLBEG00000008407	utp11l	99	66.008	Labrus_bergylta
ENSMUSG00000028907	Utp11	100	58.527	ENSLACG00000006953	UTP11	100	58.527	Latimeria_chalumnae
ENSMUSG00000028907	Utp11	99	70.120	ENSLOCG00000005795	utp11l	99	70.120	Lepisosteus_oculatus
ENSMUSG00000028907	Utp11	100	84.980	ENSLAFG00000008100	UTP11	100	84.980	Loxodonta_africana
ENSMUSG00000028907	Utp11	100	91.304	ENSMFAG00000030442	UTP11	100	91.304	Macaca_fascicularis
ENSMUSG00000028907	Utp11	100	91.304	ENSMMUG00000020834	UTP11	100	91.304	Macaca_mulatta
ENSMUSG00000028907	Utp11	100	90.909	ENSMNEG00000041655	UTP11	100	90.909	Macaca_nemestrina
ENSMUSG00000028907	Utp11	100	90.909	ENSMLEG00000030408	UTP11	100	90.909	Mandrillus_leucophaeus
ENSMUSG00000028907	Utp11	99	67.984	ENSMAMG00000007927	utp11l	99	67.984	Mastacembelus_armatus
ENSMUSG00000028907	Utp11	99	67.984	ENSMZEG00005008323	utp11l	99	67.984	Maylandia_zebra
ENSMUSG00000028907	Utp11	100	74.308	ENSMGAG00000002847	UTP11	100	74.308	Meleagris_gallopavo
ENSMUSG00000028907	Utp11	100	94.466	ENSMAUG00000008360	Utp11	100	94.466	Mesocricetus_auratus
ENSMUSG00000028907	Utp11	100	89.328	ENSMICG00000001496	UTP11	100	89.328	Microcebus_murinus
ENSMUSG00000028907	Utp11	100	92.490	ENSMOCG00000021894	Utp11	100	92.490	Microtus_ochrogaster
ENSMUSG00000028907	Utp11	99	65.873	ENSMMOG00000018530	utp11l	99	65.873	Mola_mola
ENSMUSG00000028907	Utp11	96	77.778	ENSMODG00000017717	UTP11	100	77.866	Monodelphis_domestica
ENSMUSG00000028907	Utp11	99	69.565	ENSMALG00000011660	utp11l	99	69.565	Monopterus_albus
ENSMUSG00000028907	Utp11	100	98.024	MGP_CAROLIEiJ_G0026447	Utp11	100	98.024	Mus_caroli
ENSMUSG00000028907	Utp11	100	98.814	MGP_PahariEiJ_G0028778	Utp11	100	98.814	Mus_pahari
ENSMUSG00000028907	Utp11	100	99.605	MGP_SPRETEiJ_G0027426	Utp11	100	100.000	Mus_spretus
ENSMUSG00000028907	Utp11	100	88.142	ENSMPUG00000014493	UTP11	100	88.142	Mustela_putorius_furo
ENSMUSG00000028907	Utp11	100	88.142	ENSMLUG00000001003	UTP11	100	88.142	Myotis_lucifugus
ENSMUSG00000028907	Utp11	100	90.909	ENSNGAG00000013351	Utp11	100	90.909	Nannospalax_galili
ENSMUSG00000028907	Utp11	99	67.589	ENSNBRG00000010435	utp11l	99	67.589	Neolamprologus_brichardi
ENSMUSG00000028907	Utp11	100	91.304	ENSNLEG00000033980	UTP11	100	91.304	Nomascus_leucogenys
ENSMUSG00000028907	Utp11	100	75.099	ENSMEUG00000010055	UTP11	100	75.099	Notamacropus_eugenii
ENSMUSG00000028907	Utp11	100	87.352	ENSOPRG00000012818	UTP11	100	87.352	Ochotona_princeps
ENSMUSG00000028907	Utp11	100	77.866	ENSODEG00000006891	-	100	77.866	Octodon_degus
ENSMUSG00000028907	Utp11	100	68.110	ENSODEG00000003993	-	100	68.110	Octodon_degus
ENSMUSG00000028907	Utp11	100	88.933	ENSODEG00000006050	-	100	88.933	Octodon_degus
ENSMUSG00000028907	Utp11	99	66.008	ENSONIG00000016305	utp11l	99	67.589	Oreochromis_niloticus
ENSMUSG00000028907	Utp11	92	74.249	ENSOANG00000002476	UTP11	100	74.249	Ornithorhynchus_anatinus
ENSMUSG00000028907	Utp11	91	87.879	ENSOCUG00000007154	UTP11	100	87.879	Oryctolagus_cuniculus
ENSMUSG00000028907	Utp11	99	68.651	ENSORLG00000014702	utp11l	99	68.651	Oryzias_latipes
ENSMUSG00000028907	Utp11	99	68.651	ENSORLG00020018722	utp11l	99	68.651	Oryzias_latipes_hni
ENSMUSG00000028907	Utp11	99	68.651	ENSORLG00015003784	utp11l	99	68.651	Oryzias_latipes_hsok
ENSMUSG00000028907	Utp11	99	68.750	ENSOMEG00000019654	utp11l	99	68.750	Oryzias_melastigma
ENSMUSG00000028907	Utp11	100	88.142	ENSOGAG00000016492	UTP11	100	88.142	Otolemur_garnettii
ENSMUSG00000028907	Utp11	100	87.747	ENSOARG00000019954	UTP11	100	87.747	Ovis_aries
ENSMUSG00000028907	Utp11	100	90.909	ENSPPAG00000030136	UTP11	100	90.909	Pan_paniscus
ENSMUSG00000028907	Utp11	100	88.142	ENSPPRG00000022921	UTP11	100	88.142	Panthera_pardus
ENSMUSG00000028907	Utp11	100	88.142	ENSPTIG00000008274	UTP11	100	88.142	Panthera_tigris_altaica
ENSMUSG00000028907	Utp11	100	90.909	ENSPTRG00000000561	UTP11	100	90.909	Pan_troglodytes
ENSMUSG00000028907	Utp11	99	90.873	ENSPANG00000018634	UTP11	99	90.873	Papio_anubis
ENSMUSG00000028907	Utp11	99	65.079	ENSPKIG00000000780	utp11l	99	65.079	Paramormyrops_kingsleyae
ENSMUSG00000028907	Utp11	92	75.966	ENSPSIG00000004184	UTP11	94	75.966	Pelodiscus_sinensis
ENSMUSG00000028907	Utp11	99	65.079	ENSPMGG00000002273	utp11l	99	65.079	Periophthalmus_magnuspinnatus
ENSMUSG00000028907	Utp11	100	93.281	ENSPEMG00000020923	Utp11	100	93.281	Peromyscus_maniculatus_bairdii
ENSMUSG00000028907	Utp11	99	60.079	ENSPMAG00000003508	utp11l	99	60.079	Petromyzon_marinus
ENSMUSG00000028907	Utp11	100	77.866	ENSPCIG00000025711	UTP11	100	77.866	Phascolarctos_cinereus
ENSMUSG00000028907	Utp11	89	66.814	ENSPFOG00000002192	utp11l	100	66.814	Poecilia_formosa
ENSMUSG00000028907	Utp11	99	66.135	ENSPLAG00000022603	utp11l	99	66.135	Poecilia_latipinna
ENSMUSG00000028907	Utp11	99	66.534	ENSPMEG00000001976	UTP11	99	66.534	Poecilia_mexicana
ENSMUSG00000028907	Utp11	99	66.534	ENSPMEG00000020873	utp11l	99	66.534	Poecilia_mexicana
ENSMUSG00000028907	Utp11	99	65.737	ENSPREG00000006068	utp11l	99	65.737	Poecilia_reticulata
ENSMUSG00000028907	Utp11	100	90.514	ENSPPYG00000001517	UTP11	100	90.514	Pongo_abelii
ENSMUSG00000028907	Utp11	100	86.561	ENSPCAG00000011257	UTP11	100	86.561	Procavia_capensis
ENSMUSG00000028907	Utp11	100	89.328	ENSPCOG00000019349	UTP11	100	89.328	Propithecus_coquereli
ENSMUSG00000028907	Utp11	99	82.540	ENSPVAG00000001172	UTP11	99	82.540	Pteropus_vampyrus
ENSMUSG00000028907	Utp11	99	67.589	ENSPNYG00000013140	utp11l	99	67.589	Pundamilia_nyererei
ENSMUSG00000028907	Utp11	99	68.526	ENSPNAG00000027810	utp11l	99	68.526	Pygocentrus_nattereri
ENSMUSG00000028907	Utp11	100	97.233	ENSRNOG00000007174	Utp11	100	97.233	Rattus_norvegicus
ENSMUSG00000028907	Utp11	100	90.909	ENSRBIG00000027972	UTP11	100	90.909	Rhinopithecus_bieti
ENSMUSG00000028907	Utp11	100	90.909	ENSRROG00000011983	UTP11	100	90.909	Rhinopithecus_roxellana
ENSMUSG00000028907	Utp11	95	32.794	YKL099C	-	95	32.794	Saccharomyces_cerevisiae
ENSMUSG00000028907	Utp11	100	77.470	ENSSBOG00000028225	-	100	77.470	Saimiri_boliviensis_boliviensis
ENSMUSG00000028907	Utp11	99	77.381	ENSSBOG00000000871	-	93	77.381	Saimiri_boliviensis_boliviensis
ENSMUSG00000028907	Utp11	100	79.051	ENSSHAG00000014730	UTP11	100	79.051	Sarcophilus_harrisii
ENSMUSG00000028907	Utp11	99	69.048	ENSSFOG00015020388	utp11	99	69.048	Scleropages_formosus
ENSMUSG00000028907	Utp11	99	66.403	ENSSMAG00000003346	utp11l	99	66.403	Scophthalmus_maximus
ENSMUSG00000028907	Utp11	99	67.984	ENSSDUG00000010501	utp11l	99	67.984	Seriola_dumerili
ENSMUSG00000028907	Utp11	99	68.379	ENSSLDG00000002990	utp11l	99	68.379	Seriola_lalandi_dorsalis
ENSMUSG00000028907	Utp11	100	87.747	ENSSARG00000014214	UTP11	100	87.747	Sorex_araneus
ENSMUSG00000028907	Utp11	100	70.356	ENSSPUG00000004034	UTP11	100	70.356	Sphenodon_punctatus
ENSMUSG00000028907	Utp11	99	68.775	ENSSPAG00000017221	utp11l	99	68.775	Stegastes_partitus
ENSMUSG00000028907	Utp11	100	84.980	ENSSSCG00000003645	UTP11	100	84.980	Sus_scrofa
ENSMUSG00000028907	Utp11	92	68.103	ENSTGUG00000001453	UTP11	100	68.103	Taeniopygia_guttata
ENSMUSG00000028907	Utp11	99	67.063	ENSTRUG00000009375	utp11l	99	67.063	Takifugu_rubripes
ENSMUSG00000028907	Utp11	99	67.451	ENSTNIG00000006813	utp11l	99	67.451	Tetraodon_nigroviridis
ENSMUSG00000028907	Utp11	83	87.678	ENSTBEG00000008600	UTP11	100	87.678	Tupaia_belangeri
ENSMUSG00000028907	Utp11	100	86.561	ENSTTRG00000013502	UTP11	100	86.561	Tursiops_truncatus
ENSMUSG00000028907	Utp11	100	87.352	ENSUAMG00000006129	UTP11	100	87.352	Ursus_americanus
ENSMUSG00000028907	Utp11	100	87.352	ENSUMAG00000021238	UTP11	100	87.352	Ursus_maritimus
ENSMUSG00000028907	Utp11	100	84.585	ENSVPAG00000004782	UTP11	100	84.585	Vicugna_pacos
ENSMUSG00000028907	Utp11	88	86.996	ENSVVUG00000022895	UTP11	93	86.996	Vulpes_vulpes
ENSMUSG00000028907	Utp11	81	73.301	ENSXETG00000023077	-	100	73.301	Xenopus_tropicalis
ENSMUSG00000028907	Utp11	100	64.961	ENSXETG00000011509	utp11	100	64.961	Xenopus_tropicalis
ENSMUSG00000028907	Utp11	99	64.940	ENSXMAG00000013219	utp11l	99	64.940	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005615	extracellular space	-	ISO	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0007399	nervous system development	-	ISO	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0043065	positive regulation of apoptotic process	-	ISO	Process