EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000028953 (Gene tree)
Gene ID: 27407
Gene Symbol: Abcf2
Alias: 0710005O05Rik|Drr3
Full Name: ATP-binding cassette%2C sub-family F (GCN20)%2C member 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 12123
Position: chr5: 24565345-24577467
Accession: 1351657
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000030795	-	2569	XM_006535726	ENSMUSP00000030795	628 (aa)	XP_006535789	Q99LE6

Gene Model

Click here to download ENSMUSG00000028953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000028953's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000028953	Abcf2	99	67.897	FBgn0030672	CG9281	95	71.575	Drosophila_melanogaster
ENSMUSG00000028953	Abcf2	100	98.248	ENSG00000033050	ABCF2	100	98.248	Homo_sapiens
ENSMUSG00000028953	Abcf2	89	52.548	YER036C		93	52.548	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0008150	biological_process	-	ND	Process
GO:0016887	ATPase activity	-	IEA	Function