EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029014 (Gene tree)
Gene ID: 22791
Gene Symbol: Dnajc2
Alias: MIDA1|Zrf1|Zrf2
Full Name: DnaJ heat shock protein family (Hsp40) member C2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 27985
Position: chr5: 21757267-21785251
Accession: 99470
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000030771	-	2133	-	ENSMUSP00000030771	621 (aa)	-	P54103
ENSMUST00000132962	-	3758	-	-	- (aa)	-	-
ENSMUST00000147987	-	1011	-	-	- (aa)	-	-
ENSMUST00000145955	-	432	-	-	- (aa)	-	-
ENSMUST00000115195	-	1994	XM_006535679	ENSMUSP00000110849	547 (aa)	XP_006535742	E9Q9H2
ENSMUST00000115192	-	1132	-	ENSMUSP00000110846	191 (aa)	-	Q3TRX6
ENSMUST00000115193	-	2416	-	ENSMUSP00000110847	619 (aa)	-	E9Q9H3

Gene Model

Click here to download ENSMUSG00000029014's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029014's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029014	Dnajc2	100	95.812	ENSG00000105821	DNAJC2	100	97.340	Homo_sapiens
ENSMUSG00000029014	Dnajc2	100	34.975	YGR285C	ZUO1	95	36.792	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0005515	protein binding	7559602.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006260	DNA replication	7559602.	IMP	Process
GO:0006325	chromatin organization	-	IEA	Process
GO:0030308	negative regulation of cell growth	-	ISO	Process
GO:0030544	Hsp70 protein binding	-	ISO	Function
GO:0031965	nuclear membrane	-	ISO	Component
GO:0042393	histone binding	-	ISO	Function
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0061649	ubiquitin modification-dependent histone binding	-	ISO	Function
GO:2000279	negative regulation of DNA biosynthetic process	7559602.	IMP	Process