EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029062 (Gene tree)
Gene ID: 12537
Gene Symbol: Cdk11b
Alias: CDK11-p110|CDK11-p46|CDK11-p58|Cdc2l1|Cdc2l2|PITSLRE proteins
Full Name: cyclin-dependent kinase 11B
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 25085
Position: chr4: 155624854-155649938
Accession: 88353
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000105598	-	2673	XM_006538510	ENSMUSP00000101223	750 (aa)	XP_006538573	A2A9P6
ENSMUST00000067081	-	2595	XM_017319929	ENSMUSP00000070527	784 (aa)	-	P24788
ENSMUST00000105600	-	3170	XM_006538508	ENSMUSP00000101225	784 (aa)	XP_006538571	P24788
ENSMUST00000149498	-	383	-	-	- (aa)	-	-
ENSMUST00000135550	-	805	-	-	- (aa)	-	-
ENSMUST00000155100	-	631	-	-	- (aa)	-	-
ENSMUST00000143196	-	411	-	-	- (aa)	-	-
ENSMUST00000142513	-	411	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000029062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029062's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029062	Cdk11b	100	96.811	ENSG00000248333	CDK11B	100	96.811	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0001824	blastocyst development	15060143.	IMP	Process
GO:0004672	protein kinase activity	-	IEA	Function
GO:0004674	protein serine/threonine kinase activity	-	ISO	Function
GO:0004693	cyclin-dependent protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	15060143.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0006468	protein phosphorylation	21873635.	IBA	Process
GO:0006468	protein phosphorylation	-	ISO	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0007088	regulation of mitotic nuclear division	15060143.	IMP	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0050684	regulation of mRNA processing	-	ISO	Process
GO:2001234	negative regulation of apoptotic signaling pathway	15060143.	IMP	Process